RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 FAM19A5Q7Z5A7 132 aaPredicted RBP10.07□□□□□ -0.8
CPSF6-203ENST00000456847 Q8IZM0 81 aa10.07□□□□□ -0.8
CPSF6-203ENST00000456847 LINC00469Q8N7U9 141 aa10.07□□□□□ -0.8
CPSF6-203ENST00000456847 FAM168BA1KXE4 195 aa10.05□□□□□ -0.8
CPSF6-203ENST00000456847 NDUFC2-KCTD14E9PQ53 114 aa10.05□□□□□ -0.8
CPSF6-203ENST00000456847 SERTAD4-AS1Q5TG53 156 aa10.05□□□□□ -0.8
CPSF6-203ENST00000456847 SPINK6Q6UWN8 80 aa10.05□□□□□ -0.8
CPSF6-203ENST00000456847 TINCRA0A1B0GVN0 87 aa10.03□□□□□ -0.8
CPSF6-203ENST00000456847 PMVKQ15126 192 aa10.03□□□□□ -0.8
CPSF6-203ENST00000456847 PSORS1C2Q9UIG4 136 aa10.03□□□□□ -0.8
CPSF6-203ENST00000456847 C18orf32Q8TCD1 76 aa10.03□□□□□ -0.8
CPSF6-203ENST00000456847 CST9LQ9H4G1 147 aa10.03□□□□□ -0.8
CPSF6-203ENST00000456847 MT1HL1P0DM35 61 aa10.02□□□□□ -0.81
CPSF6-203ENST00000456847 C1orf137Q5JT78 98 aa10.02□□□□□ -0.81
CPSF6-203ENST00000456847 REG3GQ6UW15 175 aa10.02□□□□□ -0.81
CPSF6-203ENST00000456847 CXCL5P42830 114 aa10.01□□□□□ -0.81
CPSF6-203ENST00000456847 SMIM1B2RUZ4 78 aa10.01□□□□□ -0.81
CPSF6-203ENST00000456847 F8VRH5 84 aa10.01□□□□□ -0.81
CPSF6-203ENST00000456847 M0QXV9 152 aa10.01□□□□□ -0.81
CPSF6-203ENST00000456847 NDUFA6P56556 154 aa10.01□□□□□ -0.81
CPSF6-203ENST00000456847 LINC00614P0C842 121 aa10□□□□□ -0.81
CPSF6-203ENST00000456847 PDZD11Q5EBL8 140 aa10□□□□□ -0.81
CPSF6-203ENST00000456847 COX7B2Q8TF08 81 aa10□□□□□ -0.81
CPSF6-203ENST00000456847 IGLV5-45A0A087WSX0 123 aa9.99□□□□□ -0.81
CPSF6-203ENST00000456847 HBDP02042 147 aa9.99□□□□□ -0.81
CPSF6-203ENST00000456847 SPINK8P0C7L1 97 aa9.99□□□□□ -0.81
CPSF6-203ENST00000456847 UBE2BP63146 152 aa9.99□□□□□ -0.81
CPSF6-203ENST00000456847 C9orf129Q5T035 196 aaKnown RBP9.99□□□□□ -0.81
CPSF6-203ENST00000456847 RAB5BP61020 215 aa9.99□□□□□ -0.81
CPSF6-203ENST00000456847 SRSF9Q13242 221 aaKnown RBP eCLIP9.99□□□□□ -0.81
CPSF6-203ENST00000456847 URB1-AS1Q96HZ7 61 aa9.99□□□□□ -0.81
CPSF6-203ENST00000456847 H3BRM9 83 aa9.98□□□□□ -0.81
CPSF6-203ENST00000456847 PMCHL1Q16048 86 aa9.98□□□□□ -0.81
CPSF6-203ENST00000456847 LINC01600Q96MT4 127 aa9.98□□□□□ -0.81
CPSF6-203ENST00000456847 A0A096LNJ9 63 aa9.97□□□□□ -0.81
CPSF6-203ENST00000456847 PLA2G2DQ9UNK4 145 aa9.97□□□□□ -0.81
CPSF6-203ENST00000456847 KRTAP7-1Q8IUC3 87 aa9.96□□□□□ -0.81
CPSF6-203ENST00000456847 XAGE1AQ9HD64 81 aa9.96□□□□□ -0.81
CPSF6-203ENST00000456847 ATP5LO75964 103 aa9.95□□□□□ -0.82
CPSF6-203ENST00000456847 IGLC3P0DOY3 106 aa9.95□□□□□ -0.82
CPSF6-203ENST00000456847 IGLV7-43P04211 117 aa9.94□□□□□ -0.82
CPSF6-203ENST00000456847 KRTAP11-1Q8IUC1 163 aa9.94□□□□□ -0.82
CPSF6-203ENST00000456847 YPEL4Q96NS1 127 aa9.94□□□□□ -0.82
CPSF6-203ENST00000456847 CBLN2Q8IUK8 224 aa9.93□□□□□ -0.82
CPSF6-203ENST00000456847 ZNF22P17026 224 aaPredicted RBP9.92□□□□□ -0.82
CPSF6-203ENST00000456847 BAGE3Q86Y29 109 aa9.92□□□□□ -0.82
CPSF6-203ENST00000456847 DIRC1Q969H9 104 aa9.92□□□□□ -0.82
CPSF6-203ENST00000456847 C22orf24Q9Y442 160 aa9.91□□□□□ -0.82
CPSF6-203ENST00000456847 LBHQ53QV2 105 aaPredicted RBP9.9□□□□□ -0.82
CPSF6-203ENST00000456847 CHCHD1Q96BP2 118 aaKnown RBP9.9□□□□□ -0.82
CPSF6-203ENST00000456847 TMEM170BQ5T4T1 132 aa9.89□□□□□ -0.83
CPSF6-203ENST00000456847 C11orf86A6NJI1 115 aa9.88□□□□□ -0.83
CPSF6-203ENST00000456847 CHTOPQ9Y3Y2 248 aaKnown RBP9.88□□□□□ -0.83
CPSF6-203ENST00000456847 IGLV5-39A0A0G2JS06 123 aa9.88□□□□□ -0.83
CPSF6-203ENST00000456847 H0Y9J4 135 aa9.87□□□□□ -0.83
CPSF6-203ENST00000456847 MRPL55Q7Z7F7 128 aaKnown RBP9.87□□□□□ -0.83
CPSF6-203ENST00000456847 HSBP1O75506 76 aa9.86□□□□□ -0.83
CPSF6-203ENST00000456847 PFN2P35080 140 aa9.86□□□□□ -0.83
CPSF6-203ENST00000456847 KRTAP10-8P60410 259 aa9.86□□□□□ -0.83
CPSF6-203ENST00000456847 SLC7A5P1Q8MH63 180 aa9.86□□□□□ -0.83
CPSF6-203ENST00000456847 IFI27L1Q96BM0 104 aa9.86□□□□□ -0.83
CPSF6-203ENST00000456847 TP73-AS1Q9UF72 201 aa9.86□□□□□ -0.83
CPSF6-203ENST00000456847 TNXBP22105 4242 aa9.86□□□□□ -0.83
CPSF6-203ENST00000456847 NUPR1O60356 82 aa9.86□□□□□ -0.83
CPSF6-203ENST00000456847 ODF1Q14990 250 aa9.85□□□□□ -0.83
CPSF6-203ENST00000456847 NKAPP1Q8N9T2 125 aa9.84□□□□□ -0.83
CPSF6-203ENST00000456847 TRGC2P03986 189 aa9.84□□□□□ -0.83
CPSF6-203ENST00000456847 ERG28Q9UKR5 140 aa9.84□□□□□ -0.83
CPSF6-203ENST00000456847 HMCN2Q8NDA2 5059 aa9.83□□□□□ -0.84
CPSF6-203ENST00000456847 TRAV12-1A0A0B4J245 112 aa9.83□□□□□ -0.84
CPSF6-203ENST00000456847 ZNF625Q96I27 306 aaPredicted RBP9.83□□□□□ -0.84
CPSF6-203ENST00000456847 GAGE10A6NGK3 116 aa9.82□□□□□ -0.84
CPSF6-203ENST00000456847 FAM19A2Q8N3H0 131 aa9.82□□□□□ -0.84
CPSF6-203ENST00000456847 RPL37AP8A6NKH3 93 aa9.82□□□□□ -0.84
CPSF6-203ENST00000456847 SFTA2Q6UW10 78 aa9.82□□□□□ -0.84
CPSF6-203ENST00000456847 LINC00167Q96N53 147 aa9.82□□□□□ -0.84
CPSF6-203ENST00000456847 PRR26Q8N8Z3 221 aa9.8□□□□□ -0.84
CPSF6-203ENST00000456847 IGLV5-37A0A075B6J1 123 aa9.8□□□□□ -0.84
CPSF6-203ENST00000456847 H0Y8G0 127 aa9.8□□□□□ -0.84
CPSF6-203ENST00000456847 ZNF861PO60384 105 aa9.8□□□□□ -0.84
CPSF6-203ENST00000456847 TMEM223A0PJW6 202 aa9.79□□□□□ -0.84
CPSF6-203ENST00000456847 COX17Q14061 63 aa9.79□□□□□ -0.84
CPSF6-203ENST00000456847 SND1-IT1Q9HBX3 110 aa9.79□□□□□ -0.84
CPSF6-203ENST00000456847 BCE1O60756 84 aa9.78□□□□□ -0.84
CPSF6-203ENST00000456847 SERF1AO75920 110 aa9.78□□□□□ -0.84
CPSF6-203ENST00000456847 RPL28P46779 137 aaKnown RBP9.78□□□□□ -0.84
CPSF6-203ENST00000456847 SCO1O75880 301 aa9.77□□□□□ -0.85
CPSF6-203ENST00000456847 LEPROTL1O95214 131 aa9.77□□□□□ -0.85
CPSF6-203ENST00000456847 IGLV1-50A0A075B6I6 118 aa9.76□□□□□ -0.85
CPSF6-203ENST00000456847 LINC00158P58513 81 aa9.76□□□□□ -0.85
CPSF6-203ENST00000456847 KRTAP1-4P0C5Y4 121 aa9.76□□□□□ -0.85
CPSF6-203ENST00000456847 RPL24P83731 157 aaKnown RBP9.76□□□□□ -0.85
CPSF6-203ENST00000456847 IGKV2-28A0A075B6P5 120 aa9.75□□□□□ -0.85
CPSF6-203ENST00000456847 IGKV2D-28P01615 120 aa9.75□□□□□ -0.85
CPSF6-203ENST00000456847 A0A0U1RRA0 63 aa9.74□□□□□ -0.85
CPSF6-203ENST00000456847 VPREB1P12018 145 aa9.74□□□□□ -0.85
CPSF6-203ENST00000456847 UBE2AP49459 152 aa9.74□□□□□ -0.85
CPSF6-203ENST00000456847 LINC00310P59036 64 aa9.74□□□□□ -0.85
CPSF6-203ENST00000456847 COLCA2A8K830 154 aa9.74□□□□□ -0.85
CPSF6-203ENST00000456847 ATP6V1G1O75348 118 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms