RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 GAGE2DQ9UEU5 116 aa11.35□□□□□ -0.59
PDLIM2-215ENST00000456545 URB1-AS1Q96HZ7 61 aa11.34□□□□□ -0.59
PDLIM2-215ENST00000456545 A0A1W2PNN7 141 aa11.33□□□□□ -0.6
PDLIM2-215ENST00000456545 ATP5LO75964 103 aa11.33□□□□□ -0.6
PDLIM2-215ENST00000456545 TLX1NBP0CAT3 122 aa11.33□□□□□ -0.6
PDLIM2-215ENST00000456545 H3BRM9 83 aa11.32□□□□□ -0.6
PDLIM2-215ENST00000456545 Q6ZRP5 223 aa11.32□□□□□ -0.6
PDLIM2-215ENST00000456545 KRTAP29-1A8MX34 341 aaPredicted RBP11.31□□□□□ -0.6
PDLIM2-215ENST00000456545 HNRNPA3P51991 378 aaKnown RBP11.31□□□□□ -0.6
PDLIM2-215ENST00000456545 PDZD11Q5EBL8 140 aa11.31□□□□□ -0.6
PDLIM2-215ENST00000456545 A0A096LNJ9 63 aa11.3□□□□□ -0.6
PDLIM2-215ENST00000456545 NDUFC2-KCTD14E9PQ53 114 aa11.3□□□□□ -0.6
PDLIM2-215ENST00000456545 OXTP01178 125 aa11.3□□□□□ -0.6
PDLIM2-215ENST00000456545 SPINK8P0C7L1 97 aa11.3□□□□□ -0.6
PDLIM2-215ENST00000456545 CXCL5P42830 114 aa11.3□□□□□ -0.6
PDLIM2-215ENST00000456545 BAGE3Q86Y29 109 aa11.3□□□□□ -0.6
PDLIM2-215ENST00000456545 COX7B2Q8TF08 81 aa11.3□□□□□ -0.6
PDLIM2-215ENST00000456545 CHCHD1Q96BP2 118 aaKnown RBP11.3□□□□□ -0.6
PDLIM2-215ENST00000456545 F8VRH5 84 aa11.29□□□□□ -0.6
PDLIM2-215ENST00000456545 PRR3P79522 188 aaKnown RBP11.29□□□□□ -0.6
PDLIM2-215ENST00000456545 IGLV5-45A0A087WSX0 123 aa11.28□□□□□ -0.6
PDLIM2-215ENST00000456545 SMIM1B2RUZ4 78 aa11.28□□□□□ -0.6
PDLIM2-215ENST00000456545 TRGC2P03986 189 aa11.28□□□□□ -0.6
PDLIM2-215ENST00000456545 HSBP1O75506 76 aa11.27□□□□□ -0.61
PDLIM2-215ENST00000456545 PHF5AQ7RTV0 110 aaKnown RBP11.27□□□□□ -0.61
PDLIM2-215ENST00000456545 FAM19A5Q7Z5A7 132 aaPredicted RBP11.27□□□□□ -0.61
PDLIM2-215ENST00000456545 FAM168BA1KXE4 195 aa11.26□□□□□ -0.61
PDLIM2-215ENST00000456545 IGLC3P0DOY3 106 aa11.26□□□□□ -0.61
PDLIM2-215ENST00000456545 CHTOPQ9Y3Y2 248 aaKnown RBP11.24□□□□□ -0.61
PDLIM2-215ENST00000456545 TMEM170BQ5T4T1 132 aa11.23□□□□□ -0.61
PDLIM2-215ENST00000456545 IFI27L1Q96BM0 104 aa11.23□□□□□ -0.61
PDLIM2-215ENST00000456545 ZNF22P17026 224 aaPredicted RBP11.21□□□□□ -0.61
PDLIM2-215ENST00000456545 UBE2BP63146 152 aa11.21□□□□□ -0.61
PDLIM2-215ENST00000456545 C9orf129Q5T035 196 aaKnown RBP11.21□□□□□ -0.61
PDLIM2-215ENST00000456545 FAM19A2Q8N3H0 131 aa11.21□□□□□ -0.61
PDLIM2-215ENST00000456545 XAGE1AQ9HD64 81 aa11.21□□□□□ -0.61
PDLIM2-215ENST00000456545 PSORS1C2Q9UIG4 136 aa11.21□□□□□ -0.61
PDLIM2-215ENST00000456545 MYCBP2O75592 4640 aa11.21□□□□□ -0.62
PDLIM2-215ENST00000456545 COLCA2A8K830 154 aa11.2□□□□□ -0.62
PDLIM2-215ENST00000456545 M0QXV9 152 aa11.2□□□□□ -0.62
PDLIM2-215ENST00000456545 C1orf137Q5JT78 98 aa11.2□□□□□ -0.62
PDLIM2-215ENST00000456545 SPINK6Q6UWN8 80 aa11.2□□□□□ -0.62
PDLIM2-215ENST00000456545 DMBT1Q9UGM3 2413 aaPredicted RBP11.2□□□□□ -0.62
PDLIM2-215ENST00000456545 C11orf86A6NJI1 115 aa11.19□□□□□ -0.62
PDLIM2-215ENST00000456545 TRAV12-1A0A0B4J245 112 aa11.17□□□□□ -0.62
PDLIM2-215ENST00000456545 SERF1AO75920 110 aa11.17□□□□□ -0.62
PDLIM2-215ENST00000456545 IGLV5-39A0A0G2JS06 123 aa11.16□□□□□ -0.62
PDLIM2-215ENST00000456545 H0Y8G0 127 aa11.16□□□□□ -0.62
PDLIM2-215ENST00000456545 LEPROTL1O95214 131 aa11.16□□□□□ -0.62
PDLIM2-215ENST00000456545 REG3GQ6UW15 175 aa11.16□□□□□ -0.62
PDLIM2-215ENST00000456545 PFN2P35080 140 aa11.15□□□□□ -0.62
PDLIM2-215ENST00000456545 LBHQ53QV2 105 aaPredicted RBP11.15□□□□□ -0.62
PDLIM2-215ENST00000456545 PKHD1L1Q86WI1 4243 aa11.14□□□□□ -0.63
PDLIM2-215ENST00000456545 SRSF9Q13242 221 aaKnown RBP eCLIP11.14□□□□□ -0.63
PDLIM2-215ENST00000456545 KRTAP7-1Q8IUC3 87 aa11.14□□□□□ -0.63
PDLIM2-215ENST00000456545 C22orf24Q9Y442 160 aa11.14□□□□□ -0.63
PDLIM2-215ENST00000456545 SCO1O75880 301 aa11.13□□□□□ -0.63
PDLIM2-215ENST00000456545 SERTAD4-AS1Q5TG53 156 aa11.13□□□□□ -0.63
PDLIM2-215ENST00000456545 SFTA2Q6UW10 78 aa11.13□□□□□ -0.63
PDLIM2-215ENST00000456545 HSPB8Q9UJY1 196 aa11.13□□□□□ -0.63
PDLIM2-215ENST00000456545 FABP4P15090 132 aa11.12□□□□□ -0.63
PDLIM2-215ENST00000456545 ZNF625Q96I27 306 aaPredicted RBP11.12□□□□□ -0.63
PDLIM2-215ENST00000456545 IGLV7-43P04211 117 aa11.11□□□□□ -0.63
PDLIM2-215ENST00000456545 TMEM223A0PJW6 202 aa11.1□□□□□ -0.63
PDLIM2-215ENST00000456545 KRTAP11-1Q8IUC1 163 aa11.1□□□□□ -0.63
PDLIM2-215ENST00000456545 ERG28Q9UKR5 140 aa11.1□□□□□ -0.63
PDLIM2-215ENST00000456545 NUPR1O60356 82 aa11.09□□□□□ -0.63
PDLIM2-215ENST00000456545 LINC00310P59036 64 aa11.09□□□□□ -0.63
PDLIM2-215ENST00000456545 COX17Q14061 63 aa11.09□□□□□ -0.63
PDLIM2-215ENST00000456545 MRPL55Q7Z7F7 128 aaKnown RBP11.09□□□□□ -0.63
PDLIM2-215ENST00000456545 NKAPP1Q8N9T2 125 aa11.09□□□□□ -0.63
PDLIM2-215ENST00000456545 HERC1Q15751 4861 aa11.08□□□□□ -0.64
PDLIM2-215ENST00000456545 DIRC1Q969H9 104 aa11.08□□□□□ -0.64
PDLIM2-215ENST00000456545 LINC01600Q96MT4 127 aa11.08□□□□□ -0.64
PDLIM2-215ENST00000456545 TP73-AS1Q9UF72 201 aa11.08□□□□□ -0.64
PDLIM2-215ENST00000456545 LRP1Q07954 4544 aaKnown RBP11.07□□□□□ -0.64
PDLIM2-215ENST00000456545 ATP6V1G1O75348 118 aa11.07□□□□□ -0.64
PDLIM2-215ENST00000456545 LINC00158P58513 81 aa11.07□□□□□ -0.64
PDLIM2-215ENST00000456545 ODF1Q14990 250 aa11.07□□□□□ -0.64
PDLIM2-215ENST00000456545 PLA2G2DQ9UNK4 145 aa11.07□□□□□ -0.64
PDLIM2-215ENST00000456545 FAT3Q8TDW7 4589 aa11.06□□□□□ -0.64
PDLIM2-215ENST00000456545 MAP1LC3CQ9BXW4 147 aa11.06□□□□□ -0.64
PDLIM2-215ENST00000456545 GAGE10A6NGK3 116 aa11.04□□□□□ -0.64
PDLIM2-215ENST00000456545 RPL37AP8A6NKH3 93 aa11.04□□□□□ -0.64
PDLIM2-215ENST00000456545 MT1HL1P0DM35 61 aa11.04□□□□□ -0.64
PDLIM2-215ENST00000456545 PLNP26678 52 aa11.04□□□□□ -0.64
PDLIM2-215ENST00000456545 LINC00167Q96N53 147 aa11.04□□□□□ -0.64
PDLIM2-215ENST00000456545 SND1-IT1Q9HBX3 110 aa11.04□□□□□ -0.64
PDLIM2-215ENST00000456545 A0A0U1RRA0 63 aa11.03□□□□□ -0.64
PDLIM2-215ENST00000456545 HIST1H2BKO60814 126 aa11.03□□□□□ -0.64
PDLIM2-215ENST00000456545 DPM2O94777 84 aa11.03□□□□□ -0.64
PDLIM2-215ENST00000456545 HIST1H2BJP06899 126 aa11.03□□□□□ -0.64
PDLIM2-215ENST00000456545 HIST1H2BOP23527 126 aa11.03□□□□□ -0.64
PDLIM2-215ENST00000456545 HIST1H2BBP33778 126 aa11.03□□□□□ -0.64
PDLIM2-215ENST00000456545 HIST1H2BDP58876 126 aa11.03□□□□□ -0.64
PDLIM2-215ENST00000456545 HIST1H2BCP62807 126 aa11.03□□□□□ -0.64
PDLIM2-215ENST00000456545 RPL24P83731 157 aaKnown RBP11.03□□□□□ -0.64
PDLIM2-215ENST00000456545 HIST2H2BEQ16778 126 aa11.03□□□□□ -0.64
PDLIM2-215ENST00000456545 MEIG1Q5JSS6 88 aa11.03□□□□□ -0.64
PDLIM2-215ENST00000456545 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms