RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 HMCN2Q8NDA2 5059 aa11.01□□□□□ -0.65
MSH6-207ENST00000456246 FA2HQ7L5A8 372 aa11□□□□□ -0.65
MSH6-207ENST00000456246 MRPL18Q9H0U6 180 aaKnown RBP11□□□□□ -0.65
MSH6-207ENST00000456246 RPS10P5Q9NQ39 176 aa11□□□□□ -0.65
MSH6-207ENST00000456246 SMCO4Q9NRQ5 59 aa11□□□□□ -0.65
MSH6-207ENST00000456246 CDKN2A-AS1Q9UH64 79 aa11□□□□□ -0.65
MSH6-207ENST00000456246 CXCL5P42830 114 aa10.99□□□□□ -0.65
MSH6-207ENST00000456246 FABP9Q0Z7S8 132 aa10.99□□□□□ -0.65
MSH6-207ENST00000456246 C1orf137Q5JT78 98 aa10.99□□□□□ -0.65
MSH6-207ENST00000456246 FAM19A5Q7Z5A7 132 aaPredicted RBP10.99□□□□□ -0.65
MSH6-207ENST00000456246 FAM168BA1KXE4 195 aa10.98□□□□□ -0.65
MSH6-207ENST00000456246 TINCRA0A1B0GVN0 87 aa10.97□□□□□ -0.65
MSH6-207ENST00000456246 F8VRH5 84 aa10.97□□□□□ -0.65
MSH6-207ENST00000456246 M0QXV9 152 aa10.97□□□□□ -0.65
MSH6-207ENST00000456246 LINC00469Q8N7U9 141 aa10.97□□□□□ -0.65
MSH6-207ENST00000456246 IGLV5-45A0A087WSX0 123 aa10.95□□□□□ -0.66
MSH6-207ENST00000456246 ODF1Q14990 250 aa10.95□□□□□ -0.66
MSH6-207ENST00000456246 PDZD11Q5EBL8 140 aa10.95□□□□□ -0.66
MSH6-207ENST00000456246 SMIM1B2RUZ4 78 aa10.94□□□□□ -0.66
MSH6-207ENST00000456246 IGLV7-43P04211 117 aa10.94□□□□□ -0.66
MSH6-207ENST00000456246 KRTAP10-8P60410 259 aa10.94□□□□□ -0.66
MSH6-207ENST00000456246 UBE2BP63146 152 aa10.94□□□□□ -0.66
MSH6-207ENST00000456246 PMVKQ15126 192 aa10.94□□□□□ -0.66
MSH6-207ENST00000456246 NDUFA5Q16718 116 aa10.94□□□□□ -0.66
MSH6-207ENST00000456246 C9orf129Q5T035 196 aaKnown RBP10.94□□□□□ -0.66
MSH6-207ENST00000456246 DIRC1Q969H9 104 aa10.94□□□□□ -0.66
MSH6-207ENST00000456246 CST9LQ9H4G1 147 aa10.94□□□□□ -0.66
MSH6-207ENST00000456246 SNAPINO95295 136 aa10.92□□□□□ -0.66
MSH6-207ENST00000456246 KRTAP7-1Q8IUC3 87 aa10.92□□□□□ -0.66
MSH6-207ENST00000456246 TRAPPC1Q9Y5R8 145 aa10.92□□□□□ -0.66
MSH6-207ENST00000456246 TNXBP22105 4242 aa10.92□□□□□ -0.66
MSH6-207ENST00000456246 H3BRM9 83 aa10.91□□□□□ -0.66
MSH6-207ENST00000456246 SVBPQ8N300 66 aa10.91□□□□□ -0.66
MSH6-207ENST00000456246 COX7B2Q8TF08 81 aa10.91□□□□□ -0.66
MSH6-207ENST00000456246 APOC3P02656 99 aa10.9□□□□□ -0.66
MSH6-207ENST00000456246 LINC00614P0C842 121 aa10.89□□□□□ -0.67
MSH6-207ENST00000456246 LBHQ53QV2 105 aaPredicted RBP10.89□□□□□ -0.67
MSH6-207ENST00000456246 KRTAP11-1Q8IUC1 163 aa10.89□□□□□ -0.67
MSH6-207ENST00000456246 C18orf32Q8TCD1 76 aa10.89□□□□□ -0.67
MSH6-207ENST00000456246 H0Y9J4 135 aa10.88□□□□□ -0.67
MSH6-207ENST00000456246 HBDP02042 147 aa10.88□□□□□ -0.67
MSH6-207ENST00000456246 RAB5BP61020 215 aa10.88□□□□□ -0.67
MSH6-207ENST00000456246 XAGE1AQ9HD64 81 aa10.88□□□□□ -0.67
MSH6-207ENST00000456246 TP73-AS1Q9UF72 201 aa10.87□□□□□ -0.67
MSH6-207ENST00000456246 NUPR1O60356 82 aa10.86□□□□□ -0.67
MSH6-207ENST00000456246 SPINK8P0C7L1 97 aa10.86□□□□□ -0.67
MSH6-207ENST00000456246 IGLC3P0DOY3 106 aa10.86□□□□□ -0.67
MSH6-207ENST00000456246 C22orf24Q9Y442 160 aa10.86□□□□□ -0.67
MSH6-207ENST00000456246 A0A096LNJ9 63 aa10.85□□□□□ -0.67
MSH6-207ENST00000456246 ATP5LO75964 103 aa10.85□□□□□ -0.67
MSH6-207ENST00000456246 NDUFA6P56556 154 aa10.84□□□□□ -0.67
MSH6-207ENST00000456246 URB1-AS1Q96HZ7 61 aa10.84□□□□□ -0.67
MSH6-207ENST00000456246 MRPL55Q7Z7F7 128 aaKnown RBP10.83□□□□□ -0.68
MSH6-207ENST00000456246 IGLV1-50A0A075B6I6 118 aa10.81□□□□□ -0.68
MSH6-207ENST00000456246 IGLV5-39A0A0G2JS06 123 aa10.81□□□□□ -0.68
MSH6-207ENST00000456246 SFTA2Q6UW10 78 aa10.81□□□□□ -0.68
MSH6-207ENST00000456246 ZNF22P17026 224 aaPredicted RBP10.8□□□□□ -0.68
MSH6-207ENST00000456246 ZNF861PO60384 105 aa10.79□□□□□ -0.68
MSH6-207ENST00000456246 PMCHL1Q16048 86 aa10.79□□□□□ -0.68
MSH6-207ENST00000456246 IGLV5-37A0A075B6J1 123 aa10.78□□□□□ -0.68
MSH6-207ENST00000456246 BAGE3Q86Y29 109 aa10.78□□□□□ -0.68
MSH6-207ENST00000456246 CHCHD1Q96BP2 118 aaKnown RBP10.78□□□□□ -0.68
MSH6-207ENST00000456246 RPL13AP40429 203 aaKnown RBP10.77□□□□□ -0.69
MSH6-207ENST00000456246 PRR26Q8N8Z3 221 aa10.77□□□□□ -0.69
MSH6-207ENST00000456246 NKAPP1Q8N9T2 125 aa10.77□□□□□ -0.69
MSH6-207ENST00000456246 YPEL4Q96NS1 127 aa10.77□□□□□ -0.69
MSH6-207ENST00000456246 KRTAP1-4P0C5Y4 121 aa10.76□□□□□ -0.69
MSH6-207ENST00000456246 RPL28P46779 137 aaKnown RBP10.76□□□□□ -0.69
MSH6-207ENST00000456246 COX17Q14061 63 aa10.76□□□□□ -0.69
MSH6-207ENST00000456246 UBR4Q5T4S7 5183 aa10.76□□□□□ -0.69
MSH6-207ENST00000456246 C11orf86A6NJI1 115 aa10.75□□□□□ -0.69
MSH6-207ENST00000456246 BCE1O60756 84 aa10.75□□□□□ -0.69
MSH6-207ENST00000456246 TMEM170BQ5T4T1 132 aa10.75□□□□□ -0.69
MSH6-207ENST00000456246 LINC00167Q96N53 147 aa10.75□□□□□ -0.69
MSH6-207ENST00000456246 ERG28Q9UKR5 140 aa10.74□□□□□ -0.69
MSH6-207ENST00000456246 TRAV12-1A0A0B4J245 112 aa10.73□□□□□ -0.69
MSH6-207ENST00000456246 PFN2P35080 140 aa10.73□□□□□ -0.69
MSH6-207ENST00000456246 CHTOPQ9Y3Y2 248 aaKnown RBP10.73□□□□□ -0.69
MSH6-207ENST00000456246 IFI27L1Q96BM0 104 aa10.72□□□□□ -0.69
MSH6-207ENST00000456246 LRP2P98164 4655 aa10.7□□□□□ -0.7
MSH6-207ENST00000456246 GAGE10A6NGK3 116 aa10.7□□□□□ -0.7
MSH6-207ENST00000456246 RPL37AP8A6NKH3 93 aa10.7□□□□□ -0.7
MSH6-207ENST00000456246 RPL24P83731 157 aaKnown RBP10.7□□□□□ -0.7
MSH6-207ENST00000456246 SND1-IT1Q9HBX3 110 aa10.7□□□□□ -0.7
MSH6-207ENST00000456246 HSBP1O75506 76 aa10.69□□□□□ -0.7
MSH6-207ENST00000456246 CBLN2Q8IUK8 224 aa10.69□□□□□ -0.7
MSH6-207ENST00000456246 ZNF625Q96I27 306 aaPredicted RBP10.69□□□□□ -0.7
MSH6-207ENST00000456246 TMEM223A0PJW6 202 aa10.67□□□□□ -0.7
MSH6-207ENST00000456246 VPREB1P12018 145 aa10.67□□□□□ -0.7
MSH6-207ENST00000456246 UBE2AP49459 152 aa10.66□□□□□ -0.7
MSH6-207ENST00000456246 IGKV2-28A0A075B6P5 120 aa10.64□□□□□ -0.71
MSH6-207ENST00000456246 IGKV2D-28P01615 120 aa10.64□□□□□ -0.71
MSH6-207ENST00000456246 KRTAP13-1Q8IUC0 172 aa10.64□□□□□ -0.71
MSH6-207ENST00000456246 TRGC2P03986 189 aa10.63□□□□□ -0.71
MSH6-207ENST00000456246 LINC00158P58513 81 aa10.63□□□□□ -0.71
MSH6-207ENST00000456246 CRYGAP11844 174 aa10.62□□□□□ -0.71
MSH6-207ENST00000456246 HERV-K104P63124 156 aa10.62□□□□□ -0.71
MSH6-207ENST00000456246 FAM19A2Q8N3H0 131 aa10.62□□□□□ -0.71
MSH6-207ENST00000456246 LINC00587B1AMM8 73 aa10.61□□□□□ -0.71
MSH6-207ENST00000456246 SCO1O75880 301 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms