RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 PSORS1C2Q9UIG4 136 aa6.6□□□□□ -1.35
DDX39A-203ENST00000454233 CARHSP1Q9Y2V2 147 aaKnown RBP6.6□□□□□ -1.35
DDX39A-203ENST00000454233 FAT3Q8TDW7 4589 aa6.6□□□□□ -1.35
DDX39A-203ENST00000454233 PKHD1L1Q86WI1 4243 aa6.59□□□□□ -1.35
DDX39A-203ENST00000454233 C1orf137Q5JT78 98 aa6.59□□□□□ -1.35
DDX39A-203ENST00000454233 CDKN2A-AS1Q9UH64 79 aa6.59□□□□□ -1.35
DDX39A-203ENST00000454233 FAM168BA1KXE4 195 aa6.58□□□□□ -1.36
DDX39A-203ENST00000454233 LINC01546A6NGU7 62 aa6.58□□□□□ -1.36
DDX39A-203ENST00000454233 LINC00469Q8N7U9 141 aa6.58□□□□□ -1.36
DDX39A-203ENST00000454233 M0QXV9 152 aa6.57□□□□□ -1.36
DDX39A-203ENST00000454233 CXCL5P42830 114 aa6.57□□□□□ -1.36
DDX39A-203ENST00000454233 TINCRA0A1B0GVN0 87 aa6.56□□□□□ -1.36
DDX39A-203ENST00000454233 F8VRH5 84 aa6.56□□□□□ -1.36
DDX39A-203ENST00000454233 UBE2BP63146 152 aa6.56□□□□□ -1.36
DDX39A-203ENST00000454233 NDUFA5Q16718 116 aa6.56□□□□□ -1.36
DDX39A-203ENST00000454233 TRAPPC1Q9Y5R8 145 aa6.56□□□□□ -1.36
DDX39A-203ENST00000454233 APOC3P02656 99 aa6.55□□□□□ -1.36
DDX39A-203ENST00000454233 IGLV7-43P04211 117 aa6.55□□□□□ -1.36
DDX39A-203ENST00000454233 PMVKQ15126 192 aa6.55□□□□□ -1.36
DDX39A-203ENST00000454233 PDZD11Q5EBL8 140 aa6.55□□□□□ -1.36
DDX39A-203ENST00000454233 C9orf129Q5T035 196 aaKnown RBP6.55□□□□□ -1.36
DDX39A-203ENST00000454233 CST9LQ9H4G1 147 aa6.55□□□□□ -1.36
DDX39A-203ENST00000454233 SMIM1B2RUZ4 78 aa6.54□□□□□ -1.36
DDX39A-203ENST00000454233 SNAPINO95295 136 aa6.54□□□□□ -1.36
DDX39A-203ENST00000454233 COX7B2Q8TF08 81 aa6.54□□□□□ -1.36
DDX39A-203ENST00000454233 DIRC1Q969H9 104 aa6.54□□□□□ -1.36
DDX39A-203ENST00000454233 IGLV5-45A0A087WSX0 123 aa6.53□□□□□ -1.36
DDX39A-203ENST00000454233 H3BRM9 83 aa6.53□□□□□ -1.36
DDX39A-203ENST00000454233 KRTAP10-8P60410 259 aa6.53□□□□□ -1.36
DDX39A-203ENST00000454233 KRTAP7-1Q8IUC3 87 aa6.53□□□□□ -1.36
DDX39A-203ENST00000454233 SVBPQ8N300 66 aa6.53□□□□□ -1.36
DDX39A-203ENST00000454233 SPINK8P0C7L1 97 aa6.52□□□□□ -1.37
DDX39A-203ENST00000454233 LINC00614P0C842 121 aa6.52□□□□□ -1.37
DDX39A-203ENST00000454233 NDUFA6P56556 154 aa6.52□□□□□ -1.37
DDX39A-203ENST00000454233 RAB5BP61020 215 aa6.52□□□□□ -1.37
DDX39A-203ENST00000454233 KRTAP11-1Q8IUC1 163 aa6.52□□□□□ -1.37
DDX39A-203ENST00000454233 C18orf32Q8TCD1 76 aa6.52□□□□□ -1.37
DDX39A-203ENST00000454233 XAGE1AQ9HD64 81 aa6.52□□□□□ -1.37
DDX39A-203ENST00000454233 HBDP02042 147 aa6.51□□□□□ -1.37
DDX39A-203ENST00000454233 LBHQ53QV2 105 aaPredicted RBP6.51□□□□□ -1.37
DDX39A-203ENST00000454233 C22orf24Q9Y442 160 aa6.51□□□□□ -1.37
DDX39A-203ENST00000454233 A0A096LNJ9 63 aa6.5□□□□□ -1.37
DDX39A-203ENST00000454233 H0Y9J4 135 aa6.5□□□□□ -1.37
DDX39A-203ENST00000454233 IGLC3P0DOY3 106 aa6.5□□□□□ -1.37
DDX39A-203ENST00000454233 ATP5LO75964 103 aa6.49□□□□□ -1.37
DDX39A-203ENST00000454233 ODF1Q14990 250 aa6.49□□□□□ -1.37
DDX39A-203ENST00000454233 URB1-AS1Q96HZ7 61 aa6.49□□□□□ -1.37
DDX39A-203ENST00000454233 TP73-AS1Q9UF72 201 aa6.49□□□□□ -1.37
DDX39A-203ENST00000454233 NUPR1O60356 82 aa6.48□□□□□ -1.37
DDX39A-203ENST00000454233 PMCHL1Q16048 86 aa6.48□□□□□ -1.37
DDX39A-203ENST00000454233 MRPL55Q7Z7F7 128 aaKnown RBP6.48□□□□□ -1.37
DDX39A-203ENST00000454233 HMCN2Q8NDA2 5059 aa6.48□□□□□ -1.37
DDX39A-203ENST00000454233 ZNF22P17026 224 aaPredicted RBP6.47□□□□□ -1.37
DDX39A-203ENST00000454233 BAGE3Q86Y29 109 aa6.47□□□□□ -1.37
DDX39A-203ENST00000454233 IGLV5-39A0A0G2JS06 123 aa6.46□□□□□ -1.38
DDX39A-203ENST00000454233 PRR26Q8N8Z3 221 aa6.46□□□□□ -1.38
DDX39A-203ENST00000454233 IGLV1-50A0A075B6I6 118 aa6.45□□□□□ -1.38
DDX39A-203ENST00000454233 ZNF861PO60384 105 aa6.45□□□□□ -1.38
DDX39A-203ENST00000454233 PFN2P35080 140 aa6.45□□□□□ -1.38
DDX39A-203ENST00000454233 TMEM170BQ5T4T1 132 aa6.45□□□□□ -1.38
DDX39A-203ENST00000454233 NKAPP1Q8N9T2 125 aa6.45□□□□□ -1.38
DDX39A-203ENST00000454233 CHCHD1Q96BP2 118 aaKnown RBP6.45□□□□□ -1.38
DDX39A-203ENST00000454233 C11orf86A6NJI1 115 aa6.44□□□□□ -1.38
DDX39A-203ENST00000454233 SFTA2Q6UW10 78 aa6.44□□□□□ -1.38
DDX39A-203ENST00000454233 LINC00167Q96N53 147 aa6.44□□□□□ -1.38
DDX39A-203ENST00000454233 YPEL4Q96NS1 127 aa6.44□□□□□ -1.38
DDX39A-203ENST00000454233 CHTOPQ9Y3Y2 248 aaKnown RBP6.44□□□□□ -1.38
DDX39A-203ENST00000454233 IGLV5-37A0A075B6J1 123 aa6.43□□□□□ -1.38
DDX39A-203ENST00000454233 GAGE10A6NGK3 116 aa6.43□□□□□ -1.38
DDX39A-203ENST00000454233 RPL37AP8A6NKH3 93 aa6.43□□□□□ -1.38
DDX39A-203ENST00000454233 BCE1O60756 84 aa6.43□□□□□ -1.38
DDX39A-203ENST00000454233 KRTAP1-4P0C5Y4 121 aa6.43□□□□□ -1.38
DDX39A-203ENST00000454233 RPL13AP40429 203 aaKnown RBP6.43□□□□□ -1.38
DDX39A-203ENST00000454233 RPL28P46779 137 aaKnown RBP6.43□□□□□ -1.38
DDX39A-203ENST00000454233 IFI27L1Q96BM0 104 aa6.43□□□□□ -1.38
DDX39A-203ENST00000454233 ERG28Q9UKR5 140 aa6.43□□□□□ -1.38
DDX39A-203ENST00000454233 COX17Q14061 63 aa6.42□□□□□ -1.38
DDX39A-203ENST00000454233 ZNF625Q96I27 306 aaPredicted RBP6.42□□□□□ -1.38
DDX39A-203ENST00000454233 TNXBP22105 4242 aa6.41□□□□□ -1.38
DDX39A-203ENST00000454233 TRAV12-1A0A0B4J245 112 aa6.41□□□□□ -1.38
DDX39A-203ENST00000454233 HSBP1O75506 76 aa6.41□□□□□ -1.38
DDX39A-203ENST00000454233 RPL24P83731 157 aaKnown RBP6.41□□□□□ -1.38
DDX39A-203ENST00000454233 CBLN2Q8IUK8 224 aa6.41□□□□□ -1.38
DDX39A-203ENST00000454233 SND1-IT1Q9HBX3 110 aa6.41□□□□□ -1.38
DDX39A-203ENST00000454233 UBE2AP49459 152 aa6.39□□□□□ -1.39
DDX39A-203ENST00000454233 IGKV2-28A0A075B6P5 120 aa6.38□□□□□ -1.39
DDX39A-203ENST00000454233 TMEM223A0PJW6 202 aa6.38□□□□□ -1.39
DDX39A-203ENST00000454233 SCO1O75880 301 aa6.38□□□□□ -1.39
DDX39A-203ENST00000454233 IGKV2D-28P01615 120 aa6.38□□□□□ -1.39
DDX39A-203ENST00000454233 TRGC2P03986 189 aa6.38□□□□□ -1.39
DDX39A-203ENST00000454233 VPREB1P12018 145 aa6.38□□□□□ -1.39
DDX39A-203ENST00000454233 LINC00158P58513 81 aa6.38□□□□□ -1.39
DDX39A-203ENST00000454233 FAM19A2Q8N3H0 131 aa6.38□□□□□ -1.39
DDX39A-203ENST00000454233 ATP6V1G1O75348 118 aa6.37□□□□□ -1.39
DDX39A-203ENST00000454233 H0Y8G0 127 aa6.36□□□□□ -1.39
DDX39A-203ENST00000454233 CRYGAP11844 174 aa6.36□□□□□ -1.39
DDX39A-203ENST00000454233 A0A0U1RRA0 63 aa6.35□□□□□ -1.39
DDX39A-203ENST00000454233 SERF1AO75920 110 aa6.35□□□□□ -1.39
DDX39A-203ENST00000454233 LEPROTL1O95214 131 aa6.35□□□□□ -1.39
DDX39A-203ENST00000454233 HERV-K104P63124 156 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms