RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-223ENST00000449864 NDUFC2-KCTD14E9PQ53 114 aa9.81□□□□□ -0.84
HDLBP-223ENST00000449864 C6orf226Q5I0X4 101 aa9.81□□□□□ -0.84
HDLBP-223ENST00000449864 PHF5AQ7RTV0 110 aaKnown RBP9.81□□□□□ -0.84
HDLBP-223ENST00000449864 FAM19A5Q7Z5A7 132 aaPredicted RBP9.81□□□□□ -0.84
HDLBP-223ENST00000449864 LINC00469Q8N7U9 141 aa9.81□□□□□ -0.84
HDLBP-223ENST00000449864 FAM168BA1KXE4 195 aa9.8□□□□□ -0.84
HDLBP-223ENST00000449864 SERTAD4-AS1Q5TG53 156 aa9.8□□□□□ -0.84
HDLBP-223ENST00000449864 SPINK6Q6UWN8 80 aa9.79□□□□□ -0.84
HDLBP-223ENST00000449864 TINCRA0A1B0GVN0 87 aa9.78□□□□□ -0.84
HDLBP-223ENST00000449864 PMVKQ15126 192 aa9.78□□□□□ -0.84
HDLBP-223ENST00000449864 C18orf32Q8TCD1 76 aa9.78□□□□□ -0.84
HDLBP-223ENST00000449864 PSORS1C2Q9UIG4 136 aa9.78□□□□□ -0.84
HDLBP-223ENST00000449864 REG3GQ6UW15 175 aa9.77□□□□□ -0.85
HDLBP-223ENST00000449864 CST9LQ9H4G1 147 aa9.77□□□□□ -0.85
HDLBP-223ENST00000449864 SMIM1B2RUZ4 78 aa9.76□□□□□ -0.85
HDLBP-223ENST00000449864 F8VRH5 84 aa9.76□□□□□ -0.85
HDLBP-223ENST00000449864 MT1HL1P0DM35 61 aa9.76□□□□□ -0.85
HDLBP-223ENST00000449864 CXCL5P42830 114 aa9.76□□□□□ -0.85
HDLBP-223ENST00000449864 C1orf137Q5JT78 98 aa9.76□□□□□ -0.85
HDLBP-223ENST00000449864 M0QXV9 152 aa9.75□□□□□ -0.85
HDLBP-223ENST00000449864 NDUFA6P56556 154 aa9.75□□□□□ -0.85
HDLBP-223ENST00000449864 PDZD11Q5EBL8 140 aa9.75□□□□□ -0.85
HDLBP-223ENST00000449864 COX7B2Q8TF08 81 aa9.75□□□□□ -0.85
HDLBP-223ENST00000449864 IGLV5-45A0A087WSX0 123 aa9.74□□□□□ -0.85
HDLBP-223ENST00000449864 HBDP02042 147 aa9.74□□□□□ -0.85
HDLBP-223ENST00000449864 LINC00614P0C842 121 aa9.74□□□□□ -0.85
HDLBP-223ENST00000449864 RAB5BP61020 215 aa9.74□□□□□ -0.85
HDLBP-223ENST00000449864 UBE2BP63146 152 aa9.74□□□□□ -0.85
HDLBP-223ENST00000449864 C9orf129Q5T035 196 aaKnown RBP9.74□□□□□ -0.85
HDLBP-223ENST00000449864 A0A096LNJ9 63 aa9.73□□□□□ -0.85
HDLBP-223ENST00000449864 H3BRM9 83 aa9.73□□□□□ -0.85
HDLBP-223ENST00000449864 SPINK8P0C7L1 97 aa9.73□□□□□ -0.85
HDLBP-223ENST00000449864 SRSF9Q13242 221 aaKnown RBP eCLIP9.73□□□□□ -0.853e-10■■■■■ 32.5
HDLBP-223ENST00000449864 PMCHL1Q16048 86 aa9.73□□□□□ -0.85
HDLBP-223ENST00000449864 URB1-AS1Q96HZ7 61 aa9.73□□□□□ -0.85
HDLBP-223ENST00000449864 LINC01600Q96MT4 127 aa9.72□□□□□ -0.85
HDLBP-223ENST00000449864 PLA2G2DQ9UNK4 145 aa9.72□□□□□ -0.85
HDLBP-223ENST00000449864 XAGE1AQ9HD64 81 aa9.71□□□□□ -0.86
HDLBP-223ENST00000449864 ATP5LO75964 103 aa9.7□□□□□ -0.86
HDLBP-223ENST00000449864 IGLC3P0DOY3 106 aa9.7□□□□□ -0.86
HDLBP-223ENST00000449864 KRTAP7-1Q8IUC3 87 aa9.7□□□□□ -0.86
HDLBP-223ENST00000449864 IGLV7-43P04211 117 aa9.69□□□□□ -0.86
HDLBP-223ENST00000449864 KRTAP11-1Q8IUC1 163 aa9.69□□□□□ -0.86
HDLBP-223ENST00000449864 CBLN2Q8IUK8 224 aa9.68□□□□□ -0.86
HDLBP-223ENST00000449864 YPEL4Q96NS1 127 aa9.68□□□□□ -0.86
HDLBP-223ENST00000449864 DIRC1Q969H9 104 aa9.67□□□□□ -0.86
HDLBP-223ENST00000449864 ZNF22P17026 224 aaPredicted RBP9.66□□□□□ -0.86
HDLBP-223ENST00000449864 BAGE3Q86Y29 109 aa9.66□□□□□ -0.86
HDLBP-223ENST00000449864 LBHQ53QV2 105 aaPredicted RBP9.65□□□□□ -0.86
HDLBP-223ENST00000449864 CHCHD1Q96BP2 118 aaKnown RBP9.65□□□□□ -0.86
HDLBP-223ENST00000449864 C22orf24Q9Y442 160 aa9.65□□□□□ -0.86
HDLBP-223ENST00000449864 TMEM170BQ5T4T1 132 aa9.64□□□□□ -0.87
HDLBP-223ENST00000449864 IGLV5-39A0A0G2JS06 123 aa9.63□□□□□ -0.87
HDLBP-223ENST00000449864 C11orf86A6NJI1 115 aa9.63□□□□□ -0.87
HDLBP-223ENST00000449864 CHTOPQ9Y3Y2 248 aaKnown RBP9.63□□□□□ -0.87
HDLBP-223ENST00000449864 H0Y9J4 135 aa9.62□□□□□ -0.87
HDLBP-223ENST00000449864 MRPL55Q7Z7F7 128 aaKnown RBP9.62□□□□□ -0.87
HDLBP-223ENST00000449864 HSBP1O75506 76 aa9.61□□□□□ -0.87
HDLBP-223ENST00000449864 PFN2P35080 140 aa9.61□□□□□ -0.87
HDLBP-223ENST00000449864 KRTAP10-8P60410 259 aa9.61□□□□□ -0.87
HDLBP-223ENST00000449864 SLC7A5P1Q8MH63 180 aa9.61□□□□□ -0.87
HDLBP-223ENST00000449864 IFI27L1Q96BM0 104 aa9.61□□□□□ -0.87
HDLBP-223ENST00000449864 TP73-AS1Q9UF72 201 aa9.61□□□□□ -0.87
HDLBP-223ENST00000449864 NUPR1O60356 82 aa9.6□□□□□ -0.87
HDLBP-223ENST00000449864 NKAPP1Q8N9T2 125 aa9.6□□□□□ -0.87
HDLBP-223ENST00000449864 SFTA2Q6UW10 78 aa9.59□□□□□ -0.87
HDLBP-223ENST00000449864 ERG28Q9UKR5 140 aa9.59□□□□□ -0.87
HDLBP-223ENST00000449864 HMCN2Q8NDA2 5059 aa9.58□□□□□ -0.88
HDLBP-223ENST00000449864 TRAV12-1A0A0B4J245 112 aa9.58□□□□□ -0.88
HDLBP-223ENST00000449864 TRGC2P03986 189 aa9.58□□□□□ -0.88
HDLBP-223ENST00000449864 ODF1Q14990 250 aa9.58□□□□□ -0.88
HDLBP-223ENST00000449864 GAGE10A6NGK3 116 aa9.57□□□□□ -0.88
HDLBP-223ENST00000449864 RPL37AP8A6NKH3 93 aa9.57□□□□□ -0.88
HDLBP-223ENST00000449864 FAM19A2Q8N3H0 131 aa9.57□□□□□ -0.88
HDLBP-223ENST00000449864 ZNF625Q96I27 306 aaPredicted RBP9.57□□□□□ -0.88
HDLBP-223ENST00000449864 LINC00167Q96N53 147 aa9.56□□□□□ -0.88
HDLBP-223ENST00000449864 TNXBP22105 4242 aa9.55□□□□□ -0.88
HDLBP-223ENST00000449864 IGLV5-37A0A075B6J1 123 aa9.55□□□□□ -0.88
HDLBP-223ENST00000449864 H0Y8G0 127 aa9.55□□□□□ -0.88
HDLBP-223ENST00000449864 COX17Q14061 63 aa9.55□□□□□ -0.88
HDLBP-223ENST00000449864 PRR26Q8N8Z3 221 aa9.55□□□□□ -0.88
HDLBP-223ENST00000449864 TMEM223A0PJW6 202 aa9.54□□□□□ -0.88
HDLBP-223ENST00000449864 ZNF861PO60384 105 aa9.54□□□□□ -0.88
HDLBP-223ENST00000449864 BCE1O60756 84 aa9.54□□□□□ -0.88
HDLBP-223ENST00000449864 SND1-IT1Q9HBX3 110 aa9.54□□□□□ -0.88
HDLBP-223ENST00000449864 SERF1AO75920 110 aa9.53□□□□□ -0.88
HDLBP-223ENST00000449864 RPL28P46779 137 aaKnown RBP9.53□□□□□ -0.88
HDLBP-223ENST00000449864 LEPROTL1O95214 131 aa9.52□□□□□ -0.89
HDLBP-223ENST00000449864 RPL24P83731 157 aaKnown RBP9.52□□□□□ -0.89
HDLBP-223ENST00000449864 IGLV1-50A0A075B6I6 118 aa9.51□□□□□ -0.89
HDLBP-223ENST00000449864 IGKV2-28A0A075B6P5 120 aa9.51□□□□□ -0.89
HDLBP-223ENST00000449864 IGKV2D-28P01615 120 aa9.51□□□□□ -0.89
HDLBP-223ENST00000449864 LINC00158P58513 81 aa9.51□□□□□ -0.89
HDLBP-223ENST00000449864 SCO1O75880 301 aa9.5□□□□□ -0.89
HDLBP-223ENST00000449864 KRTAP1-4P0C5Y4 121 aa9.5□□□□□ -0.89
HDLBP-223ENST00000449864 LINC00310P59036 64 aa9.5□□□□□ -0.89
HDLBP-223ENST00000449864 COLCA2A8K830 154 aa9.49□□□□□ -0.89
HDLBP-223ENST00000449864 VPREB1P12018 145 aa9.49□□□□□ -0.89
HDLBP-223ENST00000449864 RPL13AP40429 203 aaKnown RBP9.49□□□□□ -0.89
HDLBP-223ENST00000449864 UBE2AP49459 152 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms