RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 ODF1Q14990 250 aa6.81□□□□□ -1.32
SMPD4-211ENST00000449159 UNQ6190/PRO20217Q6UXQ8 127 aa6.81□□□□□ -1.32
SMPD4-211ENST00000449159 TOMM7Q9P0U1 55 aa6.81□□□□□ -1.32
SMPD4-211ENST00000449159 HSPB8Q9UJY1 196 aa6.81□□□□□ -1.32
SMPD4-211ENST00000449159 MYCBP2O75592 4640 aa6.81□□□□□ -1.32
SMPD4-211ENST00000449159 F8VRH5 84 aa6.8□□□□□ -1.32
SMPD4-211ENST00000449159 Q8IZM0 81 aa6.8□□□□□ -1.32
SMPD4-211ENST00000449159 A0A096LNI7 61 aa6.79□□□□□ -1.32
SMPD4-211ENST00000449159 IGKV2-24A0A0C4DH68 120 aa6.79□□□□□ -1.32
SMPD4-211ENST00000449159 H3BRM9 83 aa6.79□□□□□ -1.32
SMPD4-211ENST00000449159 NDUFA1O15239 70 aa6.79□□□□□ -1.32
SMPD4-211ENST00000449159 PRSS2P07478 247 aa6.79□□□□□ -1.32
SMPD4-211ENST00000449159 SCXQ7RTU7 201 aa6.79□□□□□ -1.32
SMPD4-211ENST00000449159 PMCHL2Q9BQD1 86 aa6.79□□□□□ -1.32
SMPD4-211ENST00000449159 C6orf48Q9UBA6 75 aa6.79□□□□□ -1.32
SMPD4-211ENST00000449159 SRRM2Q9UQ35 2752 aaKnown RBP6.79□□□□□ -1.32
SMPD4-211ENST00000449159 IGLV5-39A0A0G2JS06 123 aa6.78□□□□□ -1.32
SMPD4-211ENST00000449159 LOC105371267A0A1B0GV96 52 aa6.78□□□□□ -1.32
SMPD4-211ENST00000449159 TMEM170BQ5T4T1 132 aa6.78□□□□□ -1.32
SMPD4-211ENST00000449159 COX7B2Q8TF08 81 aa6.78□□□□□ -1.32
SMPD4-211ENST00000449159 F8WDY8 70 aa6.77□□□□□ -1.33
SMPD4-211ENST00000449159 INAFM2P0DMQ5 153 aa6.77□□□□□ -1.33
SMPD4-211ENST00000449159 CKS1BP61024 79 aa6.77□□□□□ -1.33
SMPD4-211ENST00000449159 CIRBPQ14011 172 aaKnown RBP6.77□□□□□ -1.33
SMPD4-211ENST00000449159 C9orf116Q5BN46 136 aaPredicted RBP6.77□□□□□ -1.33
SMPD4-211ENST00000449159 C6orf226Q5I0X4 101 aa6.77□□□□□ -1.33
SMPD4-211ENST00000449159 Q5VSD8 79 aa6.77□□□□□ -1.33
SMPD4-211ENST00000449159 CIRBP-AS1Q8TBR5 109 aa6.77□□□□□ -1.33
SMPD4-211ENST00000449159 SPACA4Q8TDM5 124 aa6.77□□□□□ -1.33
SMPD4-211ENST00000449159 MAP1LC3CQ9BXW4 147 aa6.77□□□□□ -1.33
SMPD4-211ENST00000449159 LOC107984640A0A0U1RRK4 108 aa6.76□□□□□ -1.33
SMPD4-211ENST00000449159 SMR3BP02814 79 aaPredicted RBP6.76□□□□□ -1.33
SMPD4-211ENST00000449159 RPL18AQ02543 176 aaKnown RBP6.76□□□□□ -1.33
SMPD4-211ENST00000449159 RNF151Q2KHN1 245 aa6.76□□□□□ -1.33
SMPD4-211ENST00000449159 TRBV30A0A0K0K1B3 111 aa6.75□□□□□ -1.33
SMPD4-211ENST00000449159 TMEM223A0PJW6 202 aa6.75□□□□□ -1.33
SMPD4-211ENST00000449159 SYS1-DBNDD2H3BUS1 97 aa6.75□□□□□ -1.33
SMPD4-211ENST00000449159 GAGE2BQ13066 116 aa6.75□□□□□ -1.33
SMPD4-211ENST00000449159 MAJINQ3KP22 176 aa6.75□□□□□ -1.33
SMPD4-211ENST00000449159 TMA7Q9Y2S6 64 aaKnown RBP6.75□□□□□ -1.33
SMPD4-211ENST00000449159 A0A087WYN8 130 aa6.74□□□□□ -1.33
SMPD4-211ENST00000449159 DPM2O94777 84 aa6.74□□□□□ -1.33
SMPD4-211ENST00000449159 C3orf79P0CE67 100 aa6.74□□□□□ -1.33
SMPD4-211ENST00000449159 PLNP26678 52 aa6.74□□□□□ -1.33
SMPD4-211ENST00000449159 CXCL5P42830 114 aa6.74□□□□□ -1.33
SMPD4-211ENST00000449159 PTTG1IPP53801 180 aa6.74□□□□□ -1.33
SMPD4-211ENST00000449159 Q6ZRP5 223 aa6.74□□□□□ -1.33
SMPD4-211ENST00000449159 HIST3H2BBQ8N257 126 aa6.74□□□□□ -1.33
SMPD4-211ENST00000449159 IGKCP01834 107 aa6.73□□□□□ -1.33
SMPD4-211ENST00000449159 KRTDAPP60985 99 aa6.73□□□□□ -1.33
SMPD4-211ENST00000449159 LINC01545Q5VT33 79 aa6.73□□□□□ -1.33
SMPD4-211ENST00000449159 PKIGQ9Y2B9 76 aa6.73□□□□□ -1.33
SMPD4-211ENST00000449159 NDUFC2-KCTD14E9PQ53 114 aa6.72□□□□□ -1.33
SMPD4-211ENST00000449159 S100A6P06703 90 aa6.72□□□□□ -1.33
SMPD4-211ENST00000449159 TLX1NBP0CAT3 122 aa6.72□□□□□ -1.33
SMPD4-211ENST00000449159 GAGE2EQ4V326 116 aa6.72□□□□□ -1.33
SMPD4-211ENST00000449159 PET117Q6UWS5 81 aa6.72□□□□□ -1.33
SMPD4-211ENST00000449159 STPG4Q8N801 248 aa6.72□□□□□ -1.33
SMPD4-211ENST00000449159 DPH3Q96FX2 82 aa6.72□□□□□ -1.33
SMPD4-211ENST00000449159 HIST1H2BLQ99880 126 aa6.72□□□□□ -1.33
SMPD4-211ENST00000449159 PLAC8Q9NZF1 115 aa6.72□□□□□ -1.33
SMPD4-211ENST00000449159 GAGE2DQ9UEU5 116 aa6.72□□□□□ -1.33
SMPD4-211ENST00000449159 PKHD1L1Q86WI1 4243 aa6.72□□□□□ -1.33
SMPD4-211ENST00000449159 FLG2Q5D862 2391 aaPredicted RBP6.72□□□□□ -1.33
SMPD4-211ENST00000449159 TSPEAR-AS2P59090 65 aa6.71□□□□□ -1.34
SMPD4-211ENST00000449159 SNRPEP62304 92 aaKnown RBP6.71□□□□□ -1.34
SMPD4-211ENST00000449159 LINC00528Q8N1L1 170 aa6.71□□□□□ -1.34
SMPD4-211ENST00000449159 LINC00474Q9P2X8 69 aa6.71□□□□□ -1.34
SMPD4-211ENST00000449159 FAM168BA1KXE4 195 aa6.7□□□□□ -1.34
SMPD4-211ENST00000449159 S100A2P29034 98 aa6.7□□□□□ -1.34
SMPD4-211ENST00000449159 ZNF625Q96I27 306 aaPredicted RBP6.7□□□□□ -1.34
SMPD4-211ENST00000449159 A0A1W2PNN7 141 aa6.69□□□□□ -1.34
SMPD4-211ENST00000449159 C5orf52A6NGY3 159 aa6.69□□□□□ -1.34
SMPD4-211ENST00000449159 C9orf129Q5T035 196 aaKnown RBP6.69□□□□□ -1.34
SMPD4-211ENST00000449159 PFN2P35080 140 aa6.68□□□□□ -1.34
SMPD4-211ENST00000449159 KRTAP7-1Q8IUC3 87 aa6.68□□□□□ -1.34
SMPD4-211ENST00000449159 XAGE1AQ9HD64 81 aa6.68□□□□□ -1.34
SMPD4-211ENST00000449159 FAM229AH3BQW9 127 aa6.67□□□□□ -1.34
SMPD4-211ENST00000449159 LEPROTO15243 131 aa6.67□□□□□ -1.34
SMPD4-211ENST00000449159 HERVK_113P61574 105 aa6.67□□□□□ -1.34
SMPD4-211ENST00000449159 FAM19A5Q7Z5A7 132 aaPredicted RBP6.67□□□□□ -1.34
SMPD4-211ENST00000449159 ATOH7Q8N100 152 aa6.67□□□□□ -1.34
SMPD4-211ENST00000449159 NDUFA12Q9UI09 145 aa6.67□□□□□ -1.34
SMPD4-211ENST00000449159 ERG28Q9UKR5 140 aa6.67□□□□□ -1.34
SMPD4-211ENST00000449159 J3QQQ9 107 aa6.66□□□□□ -1.34
SMPD4-211ENST00000449159 SFTA2Q6UW10 78 aa6.66□□□□□ -1.34
SMPD4-211ENST00000449159 PLEKHB2Q96CS7 222 aa6.66□□□□□ -1.34
SMPD4-211ENST00000449159 IGKV2D-26A0A0A0MRZ7 120 aa6.65□□□□□ -1.34
SMPD4-211ENST00000449159 C20orf202A1L168 122 aa6.65□□□□□ -1.34
SMPD4-211ENST00000449159 E9PLD3 99 aa6.65□□□□□ -1.34
SMPD4-211ENST00000449159 J3QL48 77 aa6.65□□□□□ -1.34
SMPD4-211ENST00000449159 KRTAP10-4P60372 401 aaPredicted RBP6.65□□□□□ -1.34
SMPD4-211ENST00000449159 CTAG1AP78358 180 aa6.65□□□□□ -1.34
SMPD4-211ENST00000449159 SERTAD4-AS1Q5TG53 156 aa6.65□□□□□ -1.34
SMPD4-211ENST00000449159 A0A0U1RRA0 63 aa6.64□□□□□ -1.35
SMPD4-211ENST00000449159 MYMXA0A1B0GTQ4 84 aa6.64□□□□□ -1.35
SMPD4-211ENST00000449159 LGALS3P17931 250 aaKnown RBP6.64□□□□□ -1.35
SMPD4-211ENST00000449159 PHF5AQ7RTV0 110 aaKnown RBP6.64□□□□□ -1.35
SMPD4-211ENST00000449159 SMIM13P0DJ93 91 aa6.63□□□□□ -1.35
SMPD4-211ENST00000449159 LINC00158P58513 81 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms