RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 RBX1P62877 108 aa4.02□□□□□ -1.77
CDC42BPA-209ENST00000448940 CFAP126Q5VTH2 177 aa4.02□□□□□ -1.77
CDC42BPA-209ENST00000448940 Q6ZRP5 223 aa4.02□□□□□ -1.77
CDC42BPA-209ENST00000448940 IFI27L1Q96BM0 104 aa4.02□□□□□ -1.77
CDC42BPA-209ENST00000448940 PRO0628Q9UI54 55 aa4.02□□□□□ -1.77
CDC42BPA-209ENST00000448940 A8MZ25 164 aa4.01□□□□□ -1.77
CDC42BPA-209ENST00000448940 WFDC10BQ8IUB3 73 aa4.01□□□□□ -1.77
CDC42BPA-209ENST00000448940 FRYLO94915 3013 aa4.01□□□□□ -1.77
CDC42BPA-209ENST00000448940 FRYQ5TBA9 3013 aa4.01□□□□□ -1.77
CDC42BPA-209ENST00000448940 MRPL35Q9NZE8 188 aaKnown RBP4.01□□□□□ -1.77
CDC42BPA-209ENST00000448940 PRM2P04554 102 aa4.01□□□□□ -1.77
CDC42BPA-209ENST00000448940 Q8N8P6 123 aa4.01□□□□□ -1.77
CDC42BPA-209ENST00000448940 KLLNB2CW77 178 aa4□□□□□ -1.77
CDC42BPA-209ENST00000448940 NCR3O14931 201 aa4□□□□□ -1.77
CDC42BPA-209ENST00000448940 CDPF1Q6NVV7 123 aa4□□□□□ -1.77
CDC42BPA-209ENST00000448940 C11orf52Q96A22 123 aa4□□□□□ -1.77
CDC42BPA-209ENST00000448940 CELA1Q9UNI1 258 aa4□□□□□ -1.77
CDC42BPA-209ENST00000448940 LOC100131303A0A0U1RQF7 123 aa4□□□□□ -1.77
CDC42BPA-209ENST00000448940 RPL37AP8A6NKH3 93 aa4□□□□□ -1.77
CDC42BPA-209ENST00000448940 H7C423 109 aa4□□□□□ -1.77
CDC42BPA-209ENST00000448940 LINC00526Q96FQ7 95 aa4□□□□□ -1.77
CDC42BPA-209ENST00000448940 KMT2BQ9UMN6 2715 aaPredicted RBP4□□□□□ -1.77
CDC42BPA-209ENST00000448940 SPACA4Q8TDM5 124 aa4□□□□□ -1.77
CDC42BPA-209ENST00000448940 MAP1AP78559 2803 aaPredicted RBP3.99□□□□□ -1.77
CDC42BPA-209ENST00000448940 ITPR1Q14643 2758 aa3.99□□□□□ -1.77
CDC42BPA-209ENST00000448940 MRPL51Q4U2R6 128 aaKnown RBP3.99□□□□□ -1.77
CDC42BPA-209ENST00000448940 LYPD5Q6UWN5 251 aa3.99□□□□□ -1.77
CDC42BPA-209ENST00000448940 LINC00467Q9BRT7 94 aa3.99□□□□□ -1.77
CDC42BPA-209ENST00000448940 X6R8D5 127 aa3.99□□□□□ -1.77
CDC42BPA-209ENST00000448940 IGKV2-28A0A075B6P5 120 aa3.99□□□□□ -1.77
CDC42BPA-209ENST00000448940 IGKV3D-7A0A0C4DH55 119 aa3.99□□□□□ -1.77
CDC42BPA-209ENST00000448940 IGKV2D-28P01615 120 aa3.99□□□□□ -1.77
CDC42BPA-209ENST00000448940 CXCL6P80162 114 aa3.99□□□□□ -1.77
CDC42BPA-209ENST00000448940 MRPS36P82909 103 aaKnown RBP3.99□□□□□ -1.77
CDC42BPA-209ENST00000448940 LINC01620Q4KN68 170 aa3.99□□□□□ -1.77
CDC42BPA-209ENST00000448940 LIMD2Q9BT23 127 aa3.99□□□□□ -1.77
CDC42BPA-209ENST00000448940 SNURFQ9Y675 71 aa3.99□□□□□ -1.77
CDC42BPA-209ENST00000448940 K7EMI3 77 aa3.99□□□□□ -1.77
CDC42BPA-209ENST00000448940 BAALC-AS2P0C853 105 aa3.99□□□□□ -1.77
CDC42BPA-209ENST00000448940 UFSP1Q6NVU6 142 aa3.99□□□□□ -1.77
CDC42BPA-209ENST00000448940 ATP5EP56381 51 aaPredicted RBP3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 RNASE8Q8TDE3 154 aaKnown RBP3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 H3BNG1 76 aa3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 HIST1H2BOP23527 126 aa3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 HIST1H2BBP33778 126 aa3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 HIST1H2BDP58876 126 aa3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 HIST1H2BCP62807 126 aa3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 HIST2H2BEQ16778 126 aa3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 PIK3CD-AS1Q5SR53 167 aa3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 LINC01545Q5VT33 79 aa3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 HIST1H2BHQ93079 126 aa3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 HIST1H2BNQ99877 126 aa3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 HIST1H2BMQ99879 126 aa3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 ESRGQ1W209 222 aa3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 JMJD7-PLA2G4BH0Y9G9 81 aa3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 CLEC2BQ92478 149 aa3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 RPL39LQ96EH5 51 aaKnown RBP3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 XAGE1AQ9HD64 81 aa3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 CRYGAP11844 174 aa3.98□□□□□ -1.77
CDC42BPA-209ENST00000448940 SCXQ7RTU7 201 aa3.97□□□□□ -1.77
CDC42BPA-209ENST00000448940 COX7B2Q8TF08 81 aa3.97□□□□□ -1.77
CDC42BPA-209ENST00000448940 NREPQ16612 68 aa3.97□□□□□ -1.77
CDC42BPA-209ENST00000448940 C20orf197Q8N268 126 aa3.97□□□□□ -1.77
CDC42BPA-209ENST00000448940 Q8NAQ8 132 aa3.97□□□□□ -1.77
CDC42BPA-209ENST00000448940 UQCRQO14949 82 aa3.97□□□□□ -1.77
CDC42BPA-209ENST00000448940 Q6ZUT4 128 aa3.97□□□□□ -1.77
CDC42BPA-209ENST00000448940 SLPIP03973 132 aa3.97□□□□□ -1.77
CDC42BPA-209ENST00000448940 NEXN-AS1Q8NBZ9 246 aa3.97□□□□□ -1.77
CDC42BPA-209ENST00000448940 Q5VSD8 79 aa3.97□□□□□ -1.77
CDC42BPA-209ENST00000448940 SOSTDC1Q6X4U4 206 aa3.97□□□□□ -1.77
CDC42BPA-209ENST00000448940 CSNK1G2-AS1Q8NCQ2 148 aa3.97□□□□□ -1.77
CDC42BPA-209ENST00000448940 NDUFV3P56181 108 aaKnown RBP3.97□□□□□ -1.77
CDC42BPA-209ENST00000448940 SRSF3P84103 164 aaKnown RBP3.97□□□□□ -1.77
CDC42BPA-209ENST00000448940 PRYO14603 147 aa3.96□□□□□ -1.77
CDC42BPA-209ENST00000448940 FHL2Q14192 279 aa3.96□□□□□ -1.77
CDC42BPA-209ENST00000448940 Q6ZVH6 145 aa3.96□□□□□ -1.77
CDC42BPA-209ENST00000448940 SERF1AO75920 110 aa3.96□□□□□ -1.78
CDC42BPA-209ENST00000448940 ZNF726P1Q15940 193 aa3.96□□□□□ -1.78
CDC42BPA-209ENST00000448940 LINC00588Q9Y4M8 146 aa3.96□□□□□ -1.78
CDC42BPA-209ENST00000448940 TEX49A0A1B0GTD5 131 aa3.96□□□□□ -1.78
CDC42BPA-209ENST00000448940 NPYP01303 97 aa3.96□□□□□ -1.78
CDC42BPA-209ENST00000448940 K7EP34 96 aa3.96□□□□□ -1.78
CDC42BPA-209ENST00000448940 CHTF8P0CG12 524 aa3.96□□□□□ -1.78
CDC42BPA-209ENST00000448940 ZNF80P51504 273 aaPredicted RBP3.95□□□□□ -1.78
CDC42BPA-209ENST00000448940 Q8N9L7 120 aa3.95□□□□□ -1.78
CDC42BPA-209ENST00000448940 ASH1LQ9NR48 2969 aaKnown RBP3.95□□□□□ -1.78
CDC42BPA-209ENST00000448940 RNF185Q96GF1 192 aa3.95□□□□□ -1.78
CDC42BPA-209ENST00000448940 C20orf203Q8NBC4 194 aa3.95□□□□□ -1.78
CDC42BPA-209ENST00000448940 TRAV13-2A0A0B4J235 113 aa3.95□□□□□ -1.78
CDC42BPA-209ENST00000448940 A0A0J9YXV3 536 aa3.95□□□□□ -1.78
CDC42BPA-209ENST00000448940 F8WDY8 70 aa3.95□□□□□ -1.78
CDC42BPA-209ENST00000448940 TNP2Q05952 138 aa3.94□□□□□ -1.78
CDC42BPA-209ENST00000448940 ATP11AUNQ6ZP68 121 aa3.94□□□□□ -1.78
CDC42BPA-209ENST00000448940 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
CDC42BPA-209ENST00000448940 PYY3Q5JQD4 70 aa3.94□□□□□ -1.78
CDC42BPA-209ENST00000448940 SPAG11AQ6PDA7 123 aa3.93□□□□□ -1.78
CDC42BPA-209ENST00000448940 CDH23Q9H251 3354 aa3.93□□□□□ -1.78
CDC42BPA-209ENST00000448940 C9orf118A6NHY6 69 aa3.93□□□□□ -1.78
CDC42BPA-209ENST00000448940 RNASE3P12724 160 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms