RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 LINC01549A6NIU2 74 aa12.07□□□□□ -0.48
VCP-203ENST00000448530 KRTAP10-8P60410 259 aa12.07□□□□□ -0.48
VCP-203ENST00000448530 UBE2BP63146 152 aa12.07□□□□□ -0.48
VCP-203ENST00000448530 CDKN2A-AS1Q9UH64 79 aa12.07□□□□□ -0.48
VCP-203ENST00000448530 IGLV7-43P04211 117 aa12.06□□□□□ -0.48
VCP-203ENST00000448530 DIRC1Q969H9 104 aa12.06□□□□□ -0.48
VCP-203ENST00000448530 LINC00469Q8N7U9 141 aa12.05□□□□□ -0.48
VCP-203ENST00000448530 FA2HQ7L5A8 372 aa12.04□□□□□ -0.48
VCP-203ENST00000448530 SMCO4Q9NRQ5 59 aa12.04□□□□□ -0.48
VCP-203ENST00000448530 F8VRH5 84 aa12.03□□□□□ -0.48
VCP-203ENST00000448530 FABP9Q0Z7S8 132 aa12.03□□□□□ -0.48
VCP-203ENST00000448530 RHEBQ15382 184 aa12.03□□□□□ -0.48
VCP-203ENST00000448530 C9orf129Q5T035 196 aaKnown RBP12.03□□□□□ -0.48
VCP-203ENST00000448530 MRPL18Q9H0U6 180 aaKnown RBP12.03□□□□□ -0.48
VCP-203ENST00000448530 RPS10P5Q9NQ39 176 aa12.03□□□□□ -0.48
VCP-203ENST00000448530 CXCL5P42830 114 aa12.02□□□□□ -0.49
VCP-203ENST00000448530 TNXBP22105 4242 aa12.01□□□□□ -0.49
VCP-203ENST00000448530 TINCRA0A1B0GVN0 87 aa12.01□□□□□ -0.49
VCP-203ENST00000448530 LINC01546A6NGU7 62 aa12.01□□□□□ -0.49
VCP-203ENST00000448530 ODF1Q14990 250 aa12.01□□□□□ -0.49
VCP-203ENST00000448530 KRTAP11-1Q8IUC1 163 aa12.01□□□□□ -0.49
VCP-203ENST00000448530 KRTAP7-1Q8IUC3 87 aa12.01□□□□□ -0.49
VCP-203ENST00000448530 UBR4Q5T4S7 5183 aa12.01□□□□□ -0.49
VCP-203ENST00000448530 PDZD11Q5EBL8 140 aa11.99□□□□□ -0.49
VCP-203ENST00000448530 C10orf91Q5T1B1 145 aa11.99□□□□□ -0.49
VCP-203ENST00000448530 CST9LQ9H4G1 147 aa11.99□□□□□ -0.49
VCP-203ENST00000448530 XAGE1AQ9HD64 81 aa11.99□□□□□ -0.49
VCP-203ENST00000448530 CARHSP1Q9Y2V2 147 aaKnown RBP11.99□□□□□ -0.49
VCP-203ENST00000448530 SMIM1B2RUZ4 78 aa11.98□□□□□ -0.49
VCP-203ENST00000448530 H0Y9J4 135 aa11.98□□□□□ -0.49
VCP-203ENST00000448530 PMVKQ15126 192 aa11.98□□□□□ -0.49
VCP-203ENST00000448530 COX7B2Q8TF08 81 aa11.98□□□□□ -0.49
VCP-203ENST00000448530 LBHQ53QV2 105 aaPredicted RBP11.97□□□□□ -0.49
VCP-203ENST00000448530 IGLV5-45A0A087WSX0 123 aa11.96□□□□□ -0.49
VCP-203ENST00000448530 C22orf24Q9Y442 160 aa11.95□□□□□ -0.5
VCP-203ENST00000448530 H3BRM9 83 aa11.94□□□□□ -0.5
VCP-203ENST00000448530 SPINK8P0C7L1 97 aa11.94□□□□□ -0.5
VCP-203ENST00000448530 TRAPPC1Q9Y5R8 145 aa11.94□□□□□ -0.5
VCP-203ENST00000448530 NDUFA6P56556 154 aa11.93□□□□□ -0.5
VCP-203ENST00000448530 PRR26Q8N8Z3 221 aa11.93□□□□□ -0.5
VCP-203ENST00000448530 NUPR1O60356 82 aa11.91□□□□□ -0.5
VCP-203ENST00000448530 TP73-AS1Q9UF72 201 aa11.91□□□□□ -0.5
VCP-203ENST00000448530 IGLV1-50A0A075B6I6 118 aa11.9□□□□□ -0.5
VCP-203ENST00000448530 LINC00614P0C842 121 aa11.9□□□□□ -0.5
VCP-203ENST00000448530 NDUFA5Q16718 116 aa11.9□□□□□ -0.5
VCP-203ENST00000448530 MRPL55Q7Z7F7 128 aaKnown RBP11.9□□□□□ -0.5
VCP-203ENST00000448530 ATP5LO75964 103 aa11.89□□□□□ -0.51
VCP-203ENST00000448530 APOC3P02656 99 aa11.89□□□□□ -0.51
VCP-203ENST00000448530 RAB5BP61020 215 aa11.89□□□□□ -0.51
VCP-203ENST00000448530 C18orf32Q8TCD1 76 aa11.89□□□□□ -0.51
VCP-203ENST00000448530 ZNF861PO60384 105 aa11.88□□□□□ -0.51
VCP-203ENST00000448530 HBDP02042 147 aa11.88□□□□□ -0.51
VCP-203ENST00000448530 SNAPINO95295 136 aa11.87□□□□□ -0.51
VCP-203ENST00000448530 IGLC3P0DOY3 106 aa11.87□□□□□ -0.51
VCP-203ENST00000448530 SVBPQ8N300 66 aa11.86□□□□□ -0.51
VCP-203ENST00000448530 A0A096LNJ9 63 aa11.85□□□□□ -0.51
VCP-203ENST00000448530 RPL13AP40429 203 aaKnown RBP11.85□□□□□ -0.51
VCP-203ENST00000448530 NKAPP1Q8N9T2 125 aa11.85□□□□□ -0.51
VCP-203ENST00000448530 KRTAP1-4P0C5Y4 121 aa11.84□□□□□ -0.51
VCP-203ENST00000448530 PMCHL1Q16048 86 aa11.84□□□□□ -0.51
VCP-203ENST00000448530 URB1-AS1Q96HZ7 61 aa11.84□□□□□ -0.51
VCP-203ENST00000448530 LRP2P98164 4655 aa11.84□□□□□ -0.51
VCP-203ENST00000448530 ZNF22P17026 224 aaPredicted RBP11.83□□□□□ -0.52
VCP-203ENST00000448530 RPL28P46779 137 aaKnown RBP11.83□□□□□ -0.52
VCP-203ENST00000448530 LINC00167Q96N53 147 aa11.83□□□□□ -0.52
VCP-203ENST00000448530 IGLV5-39A0A0G2JS06 123 aa11.82□□□□□ -0.52
VCP-203ENST00000448530 GAGE10A6NGK3 116 aa11.82□□□□□ -0.52
VCP-203ENST00000448530 RPL37AP8A6NKH3 93 aa11.82□□□□□ -0.52
VCP-203ENST00000448530 BCE1O60756 84 aa11.82□□□□□ -0.52
VCP-203ENST00000448530 PFN2P35080 140 aa11.82□□□□□ -0.52
VCP-203ENST00000448530 BAGE3Q86Y29 109 aa11.81□□□□□ -0.52
VCP-203ENST00000448530 IGLV5-37A0A075B6J1 123 aa11.8□□□□□ -0.52
VCP-203ENST00000448530 TMEM170BQ5T4T1 132 aa11.8□□□□□ -0.52
VCP-203ENST00000448530 ERG28Q9UKR5 140 aa11.78□□□□□ -0.52
VCP-203ENST00000448530 C11orf86A6NJI1 115 aa11.77□□□□□ -0.53
VCP-203ENST00000448530 SFTA2Q6UW10 78 aa11.77□□□□□ -0.53
VCP-203ENST00000448530 COX17Q14061 63 aa11.76□□□□□ -0.53
VCP-203ENST00000448530 CHTOPQ9Y3Y2 248 aaKnown RBP11.76□□□□□ -0.53
VCP-203ENST00000448530 UBE2AP49459 152 aa11.75□□□□□ -0.53
VCP-203ENST00000448530 CHCHD1Q96BP2 118 aaKnown RBP11.75□□□□□ -0.53
VCP-203ENST00000448530 ZNF625Q96I27 306 aaPredicted RBP11.75□□□□□ -0.53
VCP-203ENST00000448530 SND1-IT1Q9HBX3 110 aa11.75□□□□□ -0.53
VCP-203ENST00000448530 RPL24P83731 157 aaKnown RBP11.74□□□□□ -0.53
VCP-203ENST00000448530 IGKV2-28A0A075B6P5 120 aa11.73□□□□□ -0.53
VCP-203ENST00000448530 IGKV2D-28P01615 120 aa11.73□□□□□ -0.53
VCP-203ENST00000448530 IFI27L1Q96BM0 104 aa11.72□□□□□ -0.53
VCP-203ENST00000448530 SCO1O75880 301 aa11.71□□□□□ -0.53
VCP-203ENST00000448530 YPEL4Q96NS1 127 aa11.71□□□□□ -0.53
VCP-203ENST00000448530 TRAV12-1A0A0B4J245 112 aa11.7□□□□□ -0.54
VCP-203ENST00000448530 CRYGAP11844 174 aa11.7□□□□□ -0.54
VCP-203ENST00000448530 VPREB1P12018 145 aa11.7□□□□□ -0.54
VCP-203ENST00000448530 LINC00158P58513 81 aa11.69□□□□□ -0.54
VCP-203ENST00000448530 HSBP1O75506 76 aa11.68□□□□□ -0.54
VCP-203ENST00000448530 TMEM223A0PJW6 202 aa11.67□□□□□ -0.54
VCP-203ENST00000448530 PRR4Q16378 134 aa11.67□□□□□ -0.54
VCP-203ENST00000448530 TYMSOSQ8TAI1 123 aa11.67□□□□□ -0.54
VCP-203ENST00000448530 RNF213Q63HN8 5207 aa11.67□□□□□ -0.54
VCP-203ENST00000448530 A0A087X002 238 aa11.66□□□□□ -0.54
VCP-203ENST00000448530 ATP6V1G1O75348 118 aa11.66□□□□□ -0.54
VCP-203ENST00000448530 FAM19A1Q7Z5A9 133 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms