RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 Q6ZUT4 128 aa1.56□□□□□ -2.16
PMS1-215ENST00000447232 DEDD2Q8WXF8 326 aa1.56□□□□□ -2.16
PMS1-215ENST00000447232 RNASE7Q9H1E1 156 aaKnown RBP1.56□□□□□ -2.16
PMS1-215ENST00000447232 TMEM167BQ9NRX6 74 aa1.56□□□□□ -2.16
PMS1-215ENST00000447232 NDUFAF8A1L188 74 aa1.55□□□□□ -2.16
PMS1-215ENST00000447232 C7orf77A4D0Y5 90 aa1.55□□□□□ -2.16
PMS1-215ENST00000447232 TRGC1P0CF51 173 aa1.55□□□□□ -2.16
PMS1-215ENST00000447232 CDC34P49427 236 aaPredicted RBP1.55□□□□□ -2.16
PMS1-215ENST00000447232 FAM104AQ969W3 186 aa1.55□□□□□ -2.16
PMS1-215ENST00000447232 TMEM242Q9NWH2 141 aa1.55□□□□□ -2.16
PMS1-215ENST00000447232 TRBV6-5A0A0K0K1A5 114 aa1.55□□□□□ -2.16
PMS1-215ENST00000447232 RGS5O15539 181 aa1.55□□□□□ -2.16
PMS1-215ENST00000447232 SCO1O75880 301 aa1.55□□□□□ -2.16
PMS1-215ENST00000447232 PMCHP20382 165 aa1.55□□□□□ -2.16
PMS1-215ENST00000447232 AP3S2P59780 193 aa1.55□□□□□ -2.16
PMS1-215ENST00000447232 C6orf99Q4VX62 202 aa1.55□□□□□ -2.16
PMS1-215ENST00000447232 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
PMS1-215ENST00000447232 IGLV9-49A0A0B4J1Y8 123 aa1.54□□□□□ -2.16
PMS1-215ENST00000447232 RAB19A4D1S5 217 aa1.54□□□□□ -2.16
PMS1-215ENST00000447232 UBE2G1P62253 170 aa1.54□□□□□ -2.16
PMS1-215ENST00000447232 TOMM5Q8N4H5 51 aa1.54□□□□□ -2.16
PMS1-215ENST00000447232 FUNDC2Q9BWH2 189 aa1.54□□□□□ -2.16
PMS1-215ENST00000447232 RAB26Q9ULW5 256 aa1.54□□□□□ -2.16
PMS1-215ENST00000447232 PYGO1Q9Y3Y4 419 aa1.54□□□□□ -2.16
PMS1-215ENST00000447232 FAM25EA8MYX2 175 aa1.54□□□□□ -2.16
PMS1-215ENST00000447232 VCYO14598 125 aa1.54□□□□□ -2.16
PMS1-215ENST00000447232 NOL3O60936 208 aaKnown RBP1.54□□□□□ -2.16
PMS1-215ENST00000447232 CXorf1O96002 111 aa1.54□□□□□ -2.16
PMS1-215ENST00000447232 KIAA1644Q3SXP7 199 aa1.54□□□□□ -2.16
PMS1-215ENST00000447232 NKAPP1Q8N9T2 125 aa1.54□□□□□ -2.16
PMS1-215ENST00000447232 TIMM21Q9BVV7 248 aa1.54□□□□□ -2.16
PMS1-215ENST00000447232 TRBV27A0A0K0K1C4 114 aa1.53□□□□□ -2.16
PMS1-215ENST00000447232 FAM74A7A6NL05 159 aa1.53□□□□□ -2.16
PMS1-215ENST00000447232 IFNA1P01562 189 aa1.53□□□□□ -2.16
PMS1-215ENST00000447232 POLR2KP53803 58 aaKnown RBP1.53□□□□□ -2.16
PMS1-215ENST00000447232 FAM19A3Q7Z5A8 133 aa1.53□□□□□ -2.16
PMS1-215ENST00000447232 SCGB1C1Q8TD33 95 aa1.53□□□□□ -2.16
PMS1-215ENST00000447232 LIMD2Q9BT23 127 aa1.53□□□□□ -2.16
PMS1-215ENST00000447232 TPPP3Q9BW30 176 aa1.53□□□□□ -2.16
PMS1-215ENST00000447232 NKX6-2Q9C056 277 aaPredicted RBP1.53□□□□□ -2.16
PMS1-215ENST00000447232 TRBV20-1A0A075B6N2 111 aa1.53□□□□□ -2.16
PMS1-215ENST00000447232 F2Z2F3 143 aa1.53□□□□□ -2.16
PMS1-215ENST00000447232 INMT-MINDY4F8WBC2 141 aa1.53□□□□□ -2.16
PMS1-215ENST00000447232 SMAGPQ0VAQ4 97 aa1.53□□□□□ -2.16
PMS1-215ENST00000447232 TEX261Q6UWH6 196 aa1.53□□□□□ -2.16
PMS1-215ENST00000447232 LINC01561Q8N1V8 128 aa1.53□□□□□ -2.16
PMS1-215ENST00000447232 CNFNQ9BYD5 112 aa1.53□□□□□ -2.16
PMS1-215ENST00000447232 TGIF2-C20orf24A0A0A6YYL0 155 aa1.53□□□□□ -2.17
PMS1-215ENST00000447232 DEFA1P59665 94 aa1.53□□□□□ -2.17
PMS1-215ENST00000447232 KRTAP12-2P59991 146 aa1.53□□□□□ -2.17
PMS1-215ENST00000447232 ATP11AUNQ6ZP68 121 aa1.53□□□□□ -2.17
PMS1-215ENST00000447232 TCEAL7Q9BRU2 100 aa1.53□□□□□ -2.17
PMS1-215ENST00000447232 F8VRH5 84 aa1.52□□□□□ -2.17
PMS1-215ENST00000447232 MT1BP07438 61 aa1.52□□□□□ -2.17
PMS1-215ENST00000447232 FHITP49789 147 aa1.52□□□□□ -2.17
PMS1-215ENST00000447232 CKS1BP61024 79 aa1.52□□□□□ -2.17
PMS1-215ENST00000447232 ADAMTSL4-AS1Q5T5F5 129 aa1.52□□□□□ -2.17
PMS1-215ENST00000447232 GAGE2AQ6NT46 116 aa1.52□□□□□ -2.17
PMS1-215ENST00000447232 Q75L30 129 aa1.52□□□□□ -2.17
PMS1-215ENST00000447232 Q8IZM0 81 aa1.52□□□□□ -2.17
PMS1-215ENST00000447232 SMCR5Q8TEV8 140 aa1.52□□□□□ -2.17
PMS1-215ENST00000447232 HSPB11Q9Y547 144 aa1.52□□□□□ -2.17
PMS1-215ENST00000447232 VPREB1P12018 145 aa1.52□□□□□ -2.17
PMS1-215ENST00000447232 BTCP35070 178 aa1.52□□□□□ -2.17
PMS1-215ENST00000447232 AKR1C3P42330 323 aa1.52□□□□□ -2.17
PMS1-215ENST00000447232 C9orf62Q8N4C0 152 aa1.52□□□□□ -2.17
PMS1-215ENST00000447232 TIMM17AQ99595 171 aa1.52□□□□□ -2.17
PMS1-215ENST00000447232 ST20Q9HBF5 79 aa1.52□□□□□ -2.17
PMS1-215ENST00000447232 MRPS36P82909 103 aaKnown RBP1.51□□□□□ -2.17
PMS1-215ENST00000447232 Q6ZVH6 145 aa1.51□□□□□ -2.17
PMS1-215ENST00000447232 BAGE2Q86Y30 109 aa1.51□□□□□ -2.17
PMS1-215ENST00000447232 ALKBH7Q9BT30 221 aaPredicted RBP1.51□□□□□ -2.17
PMS1-215ENST00000447232 SMIM3Q9BZL3 60 aa1.51□□□□□ -2.17
PMS1-215ENST00000447232 VCX3BQ9H321 246 aa1.51□□□□□ -2.17
PMS1-215ENST00000447232 NAP1L6A6NFF2 107 aa1.51□□□□□ -2.17
PMS1-215ENST00000447232 A8MWP4 228 aa1.51□□□□□ -2.17
PMS1-215ENST00000447232 SIX6O95475 246 aa1.51□□□□□ -2.17
PMS1-215ENST00000447232 S100A9P06702 114 aaKnown RBP1.51□□□□□ -2.17
PMS1-215ENST00000447232 ATP6V0CP27449 155 aa1.51□□□□□ -2.17
PMS1-215ENST00000447232 HBBP68871 147 aa1.51□□□□□ -2.17
PMS1-215ENST00000447232 ZNF726P1Q15940 193 aa1.51□□□□□ -2.17
PMS1-215ENST00000447232 C6orf226Q5I0X4 101 aa1.51□□□□□ -2.17
PMS1-215ENST00000447232 C1orf195Q5TG92 126 aa1.51□□□□□ -2.17
PMS1-215ENST00000447232 NUDT15Q9NV35 164 aa1.51□□□□□ -2.17
PMS1-215ENST00000447232 FXYD6-FXYD2A0A087WZ82 144 aa1.5□□□□□ -2.17
PMS1-215ENST00000447232 FAM236DA0A1B0GTK5 79 aa1.5□□□□□ -2.17
PMS1-215ENST00000447232 FAM236CP0DP71 79 aa1.5□□□□□ -2.17
PMS1-215ENST00000447232 PRAC1Q96KF2 57 aa1.5□□□□□ -2.17
PMS1-215ENST00000447232 PSMG3Q9BT73 122 aaPredicted RBP1.5□□□□□ -2.17
PMS1-215ENST00000447232 ACTR3CQ9C0K3 210 aaPredicted RBP1.5□□□□□ -2.17
PMS1-215ENST00000447232 MED9Q9NWA0 146 aa1.5□□□□□ -2.17
PMS1-215ENST00000447232 TOMM7Q9P0U1 55 aa1.5□□□□□ -2.17
PMS1-215ENST00000447232 V9GYH0 126 aa1.5□□□□□ -2.17
PMS1-215ENST00000447232 A0A0G2JQZ4 141 aa1.5□□□□□ -2.17
PMS1-215ENST00000447232 MBP02144 154 aa1.5□□□□□ -2.17
PMS1-215ENST00000447232 FCER1GP30273 86 aa1.5□□□□□ -2.17
PMS1-215ENST00000447232 SPRR1AP35321 89 aa1.5□□□□□ -2.17
PMS1-215ENST00000447232 RPL39P62891 51 aaKnown RBP1.5□□□□□ -2.17
PMS1-215ENST00000447232 PYDC2Q56P42 97 aa1.5□□□□□ -2.17
PMS1-215ENST00000447232 C10orf91Q5T1B1 145 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms