RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 PPDPFQ9H3Y8 114 aa6.09□□□□□ -1.43
PTPN3-204ENST00000446349 CIRBP-AS1Q8TBR5 109 aa6.09□□□□□ -1.43
PTPN3-204ENST00000446349 SPTBN4Q9H254 2564 aa6.09□□□□□ -1.43
PTPN3-204ENST00000446349 A0A1W2PPR1 153 aa6.09□□□□□ -1.43
PTPN3-204ENST00000446349 C1orf137Q5JT78 98 aa6.09□□□□□ -1.43
PTPN3-204ENST00000446349 C3orf84H3BNL1 204 aa6.09□□□□□ -1.44
PTPN3-204ENST00000446349 ENHOQ6UWT2 76 aa6.09□□□□□ -1.44
PTPN3-204ENST00000446349 RETNQ9HD89 108 aa6.08□□□□□ -1.44
PTPN3-204ENST00000446349 PRB2P02812 416 aaPredicted RBP6.08□□□□□ -1.44
PTPN3-204ENST00000446349 UNQ6190/PRO20217Q6UXQ8 127 aa6.08□□□□□ -1.44
PTPN3-204ENST00000446349 FAM236DA0A1B0GTK5 79 aa6.08□□□□□ -1.44
PTPN3-204ENST00000446349 FAM236CP0DP71 79 aa6.08□□□□□ -1.44
PTPN3-204ENST00000446349 Q6ZVQ6 151 aa6.08□□□□□ -1.44
PTPN3-204ENST00000446349 NTM-AS1Q6ZSK4 140 aa6.08□□□□□ -1.44
PTPN3-204ENST00000446349 Q8N814 137 aa6.08□□□□□ -1.44
PTPN3-204ENST00000446349 SLPIP03973 132 aa6.07□□□□□ -1.44
PTPN3-204ENST00000446349 MAPKAPK5-AS1Q8N8E1 139 aa6.07□□□□□ -1.44
PTPN3-204ENST00000446349 WWC2-AS2Q96NR7 200 aa6.06□□□□□ -1.44
PTPN3-204ENST00000446349 SERP2Q8N6R1 65 aa6.06□□□□□ -1.44
PTPN3-204ENST00000446349 LINC00337Q8N6G1 96 aa6.06□□□□□ -1.44
PTPN3-204ENST00000446349 SDIM1Q6ZPB5 146 aa6.06□□□□□ -1.44
PTPN3-204ENST00000446349 C1orf195Q5TG92 126 aa6.06□□□□□ -1.44
PTPN3-204ENST00000446349 TRBV10-3A0A0K0K1G6 114 aa6.05□□□□□ -1.44
PTPN3-204ENST00000446349 YPEL4Q96NS1 127 aa6.05□□□□□ -1.44
PTPN3-204ENST00000446349 Q9BRP9 147 aa6.05□□□□□ -1.44
PTPN3-204ENST00000446349 MDFIQ99750 246 aa6.05□□□□□ -1.44
PTPN3-204ENST00000446349 HRCT1Q6UXD1 115 aa6.05□□□□□ -1.44
PTPN3-204ENST00000446349 TRBV7-6A0A0J9YX20 115 aa6.05□□□□□ -1.44
PTPN3-204ENST00000446349 C20orf197Q8N268 126 aa6.05□□□□□ -1.44
PTPN3-204ENST00000446349 ZNF462Q96JM2 2506 aa6.05□□□□□ -1.44
PTPN3-204ENST00000446349 EDN2P20800 178 aa6.04□□□□□ -1.44
PTPN3-204ENST00000446349 LINC00526Q96FQ7 95 aa6.04□□□□□ -1.44
PTPN3-204ENST00000446349 COX6A2Q02221 97 aa6.04□□□□□ -1.44
PTPN3-204ENST00000446349 IGLV4-60A0A075B6I1 120 aa6.03□□□□□ -1.44
PTPN3-204ENST00000446349 KIF25-AS1Q9Y6Z4 181 aa6.03□□□□□ -1.44
PTPN3-204ENST00000446349 VPREB1P12018 145 aa6.03□□□□□ -1.44
PTPN3-204ENST00000446349 F8P00451 2351 aa6.03□□□□□ -1.44
PTPN3-204ENST00000446349 PLA2G1BP04054 148 aaKnown RBP6.03□□□□□ -1.44
PTPN3-204ENST00000446349 A0A0U1RQV1 116 aa6.02□□□□□ -1.45
PTPN3-204ENST00000446349 WDR87Q6ZQQ6 2873 aa6.02□□□□□ -1.45
PTPN3-204ENST00000446349 ESRGQ1W209 222 aa6.02□□□□□ -1.45
PTPN3-204ENST00000446349 TRAV7A0A075B6U4 112 aa6.02□□□□□ -1.45
PTPN3-204ENST00000446349 WFDC13Q8IUB5 93 aa6.02□□□□□ -1.45
PTPN3-204ENST00000446349 USP9YO00507 2555 aaPredicted RBP6.01□□□□□ -1.45
PTPN3-204ENST00000446349 Q6Q795 121 aa6.01□□□□□ -1.45
PTPN3-204ENST00000446349 SPATA3Q8NHX4 192 aa6.01□□□□□ -1.45
PTPN3-204ENST00000446349 SCXQ7RTU7 201 aa6.01□□□□□ -1.45
PTPN3-204ENST00000446349 CHD8Q9HCK8 2581 aa6.01□□□□□ -1.45
PTPN3-204ENST00000446349 C11orf72Q8NBR9 251 aa6□□□□□ -1.45
PTPN3-204ENST00000446349 FASNP49327 2511 aaKnown RBP6□□□□□ -1.45
PTPN3-204ENST00000446349 PRM2P04554 102 aa6□□□□□ -1.45
PTPN3-204ENST00000446349 C2orf91Q6ZV80 131 aa6□□□□□ -1.45
PTPN3-204ENST00000446349 MPLKIPQ8TAP9 179 aa6□□□□□ -1.45
PTPN3-204ENST00000446349 C9orf116Q5BN46 136 aaPredicted RBP6□□□□□ -1.45
PTPN3-204ENST00000446349 TP53AIP1Q9HCN2 124 aa6□□□□□ -1.45
PTPN3-204ENST00000446349 A8MZ25 164 aa5.99□□□□□ -1.45
PTPN3-204ENST00000446349 Q6ZRP5 223 aa5.99□□□□□ -1.45
PTPN3-204ENST00000446349 LINC00694P0DN24 101 aa5.99□□□□□ -1.45
PTPN3-204ENST00000446349 FAM19A4Q96LR4 140 aa5.99□□□□□ -1.45
PTPN3-204ENST00000446349 KLK9Q2XQG4 91 aa5.99□□□□□ -1.45
PTPN3-204ENST00000446349 KRTAP24-1Q3LI83 254 aa5.99□□□□□ -1.45
PTPN3-204ENST00000446349 NBDYA0A0U1RRE5 68 aa5.98□□□□□ -1.45
PTPN3-204ENST00000446349 LINC00575Q6W349 94 aa5.98□□□□□ -1.45
PTPN3-204ENST00000446349 C22orf24Q9Y442 160 aa5.98□□□□□ -1.45
PTPN3-204ENST00000446349 Q6ZRU5 148 aa5.98□□□□□ -1.45
PTPN3-204ENST00000446349 LINC01546A6NGU7 62 aa5.98□□□□□ -1.45
PTPN3-204ENST00000446349 COX7CP15954 63 aa5.97□□□□□ -1.45
PTPN3-204ENST00000446349 IGHV6-1A0A0B4J1U7 121 aa5.97□□□□□ -1.45
PTPN3-204ENST00000446349 EP400Q96L91 3159 aa5.96□□□□□ -1.45
PTPN3-204ENST00000446349 CXCL6P80162 114 aa5.96□□□□□ -1.46
PTPN3-204ENST00000446349 hDV103S1A0JD37 113 aa5.96□□□□□ -1.46
PTPN3-204ENST00000446349 C16orf90A8MZG2 172 aa5.96□□□□□ -1.46
PTPN3-204ENST00000446349 CRYGAP11844 174 aa5.96□□□□□ -1.46
PTPN3-204ENST00000446349 SMCR5Q8TEV8 140 aa5.95□□□□□ -1.46
PTPN3-204ENST00000446349 IGLV5-39A0A0G2JS06 123 aa5.95□□□□□ -1.46
PTPN3-204ENST00000446349 A6NED7 52 aa5.95□□□□□ -1.46
PTPN3-204ENST00000446349 DNAH10OSP0CZ25 163 aa5.95□□□□□ -1.46
PTPN3-204ENST00000446349 SBSPONQ8IVN8 264 aa5.95□□□□□ -1.46
PTPN3-204ENST00000446349 PKD1L2Q7Z442 2459 aa5.95□□□□□ -1.46
PTPN3-204ENST00000446349 IGHV3OR16-9A0A0B4J2B5 98 aa5.94□□□□□ -1.46
PTPN3-204ENST00000446349 CEP295Q9C0D2 2601 aa5.94□□□□□ -1.46
PTPN3-204ENST00000446349 FAM30AQ9NZY2 134 aa5.94□□□□□ -1.46
PTPN3-204ENST00000446349 CELA1Q9UNI1 258 aa5.94□□□□□ -1.46
PTPN3-204ENST00000446349 MT-ATP8P03928 68 aa5.93□□□□□ -1.46
PTPN3-204ENST00000446349 LINC01547P58512 204 aaPredicted RBP5.93□□□□□ -1.46
PTPN3-204ENST00000446349 Q6ZSN1 163 aa5.93□□□□□ -1.46
PTPN3-204ENST00000446349 Q8NBF4 154 aa5.93□□□□□ -1.46
PTPN3-204ENST00000446349 RTL8CO15255 209 aa5.93□□□□□ -1.46
PTPN3-204ENST00000446349 IGLV5-45A0A087WSX0 123 aa5.93□□□□□ -1.46
PTPN3-204ENST00000446349 A0A087WSZ3 146 aa5.93□□□□□ -1.46
PTPN3-204ENST00000446349 GVQW2A0A096LPI5 108 aaPredicted RBP5.93□□□□□ -1.46
PTPN3-204ENST00000446349 HCG22E2RYF7 251 aa5.93□□□□□ -1.46
PTPN3-204ENST00000446349 GAS8-AS1O95177 125 aa5.93□□□□□ -1.46
PTPN3-204ENST00000446349 Q8NAQ8 132 aa5.92□□□□□ -1.46
PTPN3-204ENST00000446349 LINC00208Q96KT6 92 aa5.92□□□□□ -1.46
PTPN3-204ENST00000446349 LINC00336Q6ZUF6 198 aa5.92□□□□□ -1.46
PTPN3-204ENST00000446349 SETD2Q9BYW2 2564 aaPredicted RBP5.92□□□□□ -1.46
PTPN3-204ENST00000446349 BCE1O60756 84 aa5.92□□□□□ -1.46
PTPN3-204ENST00000446349 X6R8D5 127 aa5.92□□□□□ -1.46
PTPN3-204ENST00000446349 H3BPC8 53 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms