RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.69□□□□□ -1.5
SMG1-202ENST00000446231 PRR15LQ9BU68 103 aa5.69□□□□□ -1.5
SMG1-202ENST00000446231 TRBV6-8A0A0A6YYG3 113 aa5.68□□□□□ -1.5
SMG1-202ENST00000446231 CXCL6P80162 114 aa5.68□□□□□ -1.5
SMG1-202ENST00000446231 IGF2-ASQ6U949 168 aa5.68□□□□□ -1.5
SMG1-202ENST00000446231 Q8N2B8 174 aa5.68□□□□□ -1.5
SMG1-202ENST00000446231 BEAN1Q3B7T3 259 aa5.68□□□□□ -1.5
SMG1-202ENST00000446231 COX17Q14061 63 aa5.68□□□□□ -1.5
SMG1-202ENST00000446231 C4orf3Q8WVX3 66 aa5.68□□□□□ -1.5
SMG1-202ENST00000446231 TRAV10A0A0B4J240 114 aa5.68□□□□□ -1.5
SMG1-202ENST00000446231 DEFB114Q30KQ6 69 aa5.68□□□□□ -1.5
SMG1-202ENST00000446231 F8WDY8 70 aa5.68□□□□□ -1.5
SMG1-202ENST00000446231 RNF223E7ERA6 249 aa5.67□□□□□ -1.5
SMG1-202ENST00000446231 LINC00336Q6ZUF6 198 aa5.67□□□□□ -1.5
SMG1-202ENST00000446231 C3orf84H3BNL1 204 aa5.67□□□□□ -1.5
SMG1-202ENST00000446231 K7ENP7 123 aa5.67□□□□□ -1.5
SMG1-202ENST00000446231 APOC4P55056 127 aa5.67□□□□□ -1.5
SMG1-202ENST00000446231 MAPK1IP1LQ8NDC0 245 aa5.66□□□□□ -1.5
SMG1-202ENST00000446231 TRANK1O15050 2925 aa5.66□□□□□ -1.5
SMG1-202ENST00000446231 MAP6D1Q9H9H5 199 aa5.66□□□□□ -1.5
SMG1-202ENST00000446231 DHRS4-AS1Q9P1J3 65 aa5.66□□□□□ -1.5
SMG1-202ENST00000446231 PRYO14603 147 aa5.66□□□□□ -1.5
SMG1-202ENST00000446231 REG3AQ06141 175 aa5.66□□□□□ -1.5
SMG1-202ENST00000446231 BRI3O95415 125 aa5.66□□□□□ -1.5
SMG1-202ENST00000446231 LINC00959A0A1B0GUT2 108 aa5.66□□□□□ -1.5
SMG1-202ENST00000446231 IGLV5-45A0A087WSX0 123 aa5.66□□□□□ -1.5
SMG1-202ENST00000446231 NBEAQ8NFP9 2946 aa5.65□□□□□ -1.5
SMG1-202ENST00000446231 Q8IZM0 81 aa5.65□□□□□ -1.5
SMG1-202ENST00000446231 XAGE1AQ9HD64 81 aa5.65□□□□□ -1.5
SMG1-202ENST00000446231 ESM1Q9NQ30 184 aa5.65□□□□□ -1.5
SMG1-202ENST00000446231 KLK12Q9UKR0 248 aa5.65□□□□□ -1.51
SMG1-202ENST00000446231 IGKV2D-24A0A075B6R9 120 aa5.65□□□□□ -1.51
SMG1-202ENST00000446231 LINC01561Q8N1V8 128 aa5.65□□□□□ -1.51
SMG1-202ENST00000446231 IGHV4-30-2A0A087WSY4 118 aa5.64□□□□□ -1.51
SMG1-202ENST00000446231 NANOS2P60321 138 aaKnown RBP5.64□□□□□ -1.51
SMG1-202ENST00000446231 WFDC10BQ8IUB3 73 aa5.64□□□□□ -1.51
SMG1-202ENST00000446231 LOC110117498A0A087WWA1 95 aa5.64□□□□□ -1.51
SMG1-202ENST00000446231 M0R378 163 aa5.64□□□□□ -1.51
SMG1-202ENST00000446231 SPART-AS1P0CW21 52 aa5.64□□□□□ -1.51
SMG1-202ENST00000446231 LITAFQ99732 161 aa5.64□□□□□ -1.51
SMG1-202ENST00000446231 CR1P17927 2039 aa5.63□□□□□ -1.51
SMG1-202ENST00000446231 DSPP15924 2871 aaKnown RBP5.63□□□□□ -1.51
SMG1-202ENST00000446231 CELSR2Q9HCU4 2923 aa5.63□□□□□ -1.51
SMG1-202ENST00000446231 DEFB4AO15263 64 aa5.63□□□□□ -1.51
SMG1-202ENST00000446231 H0Y9J4 135 aa5.63□□□□□ -1.51
SMG1-202ENST00000446231 FHL2Q14192 279 aa5.63□□□□□ -1.51
SMG1-202ENST00000446231 C9orf116Q5BN46 136 aaPredicted RBP5.63□□□□□ -1.51
SMG1-202ENST00000446231 WFDC13Q8IUB5 93 aa5.63□□□□□ -1.51
SMG1-202ENST00000446231 CFAP54Q96N23 3096 aa5.62□□□□□ -1.51
SMG1-202ENST00000446231 PLAC8L1A1L4L8 177 aa5.62□□□□□ -1.51
SMG1-202ENST00000446231 IGKV4-1P06312 121 aa5.62□□□□□ -1.51
SMG1-202ENST00000446231 LINC00575Q6W349 94 aa5.62□□□□□ -1.51
SMG1-202ENST00000446231 CEP350Q5VT06 3117 aa5.62□□□□□ -1.51
SMG1-202ENST00000446231 EIF4EBP3O60516 100 aaPredicted RBP5.62□□□□□ -1.51
SMG1-202ENST00000446231 SPATA3Q8NHX4 192 aa5.62□□□□□ -1.51
SMG1-202ENST00000446231 PRO0255Q9UI72 69 aa5.62□□□□□ -1.51
SMG1-202ENST00000446231 DNAH12Q6ZR08 3092 aa5.62□□□□□ -1.51
SMG1-202ENST00000446231 FBXL19-AS1Q494R0 122 aa5.61□□□□□ -1.51
SMG1-202ENST00000446231 IGLV1-40P01703 118 aa5.61□□□□□ -1.51
SMG1-202ENST00000446231 LIMD2Q9BT23 127 aa5.61□□□□□ -1.51
SMG1-202ENST00000446231 IGSF10Q6WRI0 2623 aa5.61□□□□□ -1.51
SMG1-202ENST00000446231 UNQ6190/PRO20217Q6UXQ8 127 aa5.61□□□□□ -1.51
SMG1-202ENST00000446231 MUC7Q8TAX7 377 aa5.6□□□□□ -1.51
SMG1-202ENST00000446231 SRCAPQ6ZRS2 3230 aa5.6□□□□□ -1.51
SMG1-202ENST00000446231 MUC22E2RYF6 1773 aaPredicted RBP5.6□□□□□ -1.51
SMG1-202ENST00000446231 A8MTW9 85 aa5.59□□□□□ -1.51
SMG1-202ENST00000446231 LOC100131303A0A0U1RQF7 123 aa5.59□□□□□ -1.51
SMG1-202ENST00000446231 ERC2-IT1O76042 136 aa5.59□□□□□ -1.51
SMG1-202ENST00000446231 PSCAO43653 123 aa5.59□□□□□ -1.51
SMG1-202ENST00000446231 Q8NA96 180 aa5.59□□□□□ -1.51
SMG1-202ENST00000446231 Q8N9L7 120 aa5.59□□□□□ -1.52
SMG1-202ENST00000446231 LTBP2Q14767 1821 aa5.59□□□□□ -1.52
SMG1-202ENST00000446231 C10orf99Q6UWK7 81 aa5.58□□□□□ -1.52
SMG1-202ENST00000446231 C2orf48Q96LS8 159 aa5.58□□□□□ -1.52
SMG1-202ENST00000446231 HIGD2AQ9BW72 106 aa5.58□□□□□ -1.52
SMG1-202ENST00000446231 EDN2P20800 178 aa5.58□□□□□ -1.52
SMG1-202ENST00000446231 C10orf25Q5T742 122 aa5.58□□□□□ -1.52
SMG1-202ENST00000446231 A0A0J9YWU9 116 aa5.58□□□□□ -1.52
SMG1-202ENST00000446231 LINC01600Q96MT4 127 aa5.58□□□□□ -1.52
SMG1-202ENST00000446231 UBE2DNLQ8IWF7 75 aa5.58□□□□□ -1.52
SMG1-202ENST00000446231 CYSRT1A8MQ03 144 aa5.58□□□□□ -1.52
SMG1-202ENST00000446231 LINC00474Q9P2X8 69 aa5.58□□□□□ -1.52
SMG1-202ENST00000446231 SYCNQ0VAF6 134 aa5.58□□□□□ -1.52
SMG1-202ENST00000446231 WFDC10AQ9H1F0 79 aa5.57□□□□□ -1.52
SMG1-202ENST00000446231 ADORA2A-AS1P86434 159 aa5.57□□□□□ -1.52
SMG1-202ENST00000446231 TM2D3Q9BRN9 247 aa5.57□□□□□ -1.52
SMG1-202ENST00000446231 CASC2Q6XLA1 102 aa5.57□□□□□ -1.52
SMG1-202ENST00000446231 KPRPQ5T749 579 aaPredicted RBP5.56□□□□□ -1.52
SMG1-202ENST00000446231 IGLV4-60A0A075B6I1 120 aa5.56□□□□□ -1.52
SMG1-202ENST00000446231 H7BZZ5 65 aa5.56□□□□□ -1.52
SMG1-202ENST00000446231 Q6ZQT0 140 aa5.56□□□□□ -1.52
SMG1-202ENST00000446231 OBSCN-AS1Q96MR7 158 aa5.55□□□□□ -1.52
SMG1-202ENST00000446231 C11orf72Q8NBR9 251 aa5.55□□□□□ -1.52
SMG1-202ENST00000446231 Q6YL49 198 aa5.55□□□□□ -1.52
SMG1-202ENST00000446231 LINC00482Q8N8I6 264 aa5.54□□□□□ -1.52
SMG1-202ENST00000446231 C11orf71Q6IPW1 123 aa5.54□□□□□ -1.52
SMG1-202ENST00000446231 BBC3Q96PG8 261 aaPredicted RBP5.54□□□□□ -1.52
SMG1-202ENST00000446231 FLNCQ14315 2725 aa5.54□□□□□ -1.52
SMG1-202ENST00000446231 IGKV2-28A0A075B6P5 120 aa5.54□□□□□ -1.52
SMG1-202ENST00000446231 IGKV2D-28P01615 120 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 167.4 ms