RNA–Protein interactions for RNA: ENST00000444811.6

NELFE-206, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-206ENST00000444811 Q6ZRP5 223 aa12.3□□□□□ -0.44
NELFE-206ENST00000444811 Q8IZM0 81 aa12.3□□□□□ -0.44
NELFE-206ENST00000444811 TOMM7Q9P0U1 55 aa12.3□□□□□ -0.44
NELFE-206ENST00000444811 TRBV30A0A0K0K1B3 111 aa12.29□□□□□ -0.44
NELFE-206ENST00000444811 LINC00469Q8N7U9 141 aa12.29□□□□□ -0.44
NELFE-206ENST00000444811 C7orf33Q8WU49 177 aa12.29□□□□□ -0.44
NELFE-206ENST00000444811 PACRGQ96M98 296 aaPredicted RBP12.29□□□□□ -0.44
NELFE-206ENST00000444811 SMIM1B2RUZ4 78 aa12.28□□□□□ -0.44
NELFE-206ENST00000444811 PRSS2P07478 247 aa12.28□□□□□ -0.44
NELFE-206ENST00000444811 C9orf116Q5BN46 136 aaPredicted RBP12.27□□□□□ -0.45
NELFE-206ENST00000444811 UBR4Q5T4S7 5183 aa12.26□□□□□ -0.45
NELFE-206ENST00000444811 TRGC2P03986 189 aa12.26□□□□□ -0.45
NELFE-206ENST00000444811 KRTAP29-1A8MX34 341 aaPredicted RBP12.25□□□□□ -0.45
NELFE-206ENST00000444811 IGLC3P0DOY3 106 aa12.25□□□□□ -0.45
NELFE-206ENST00000444811 C6orf226Q5I0X4 101 aa12.25□□□□□ -0.45
NELFE-206ENST00000444811 CHCHD1Q96BP2 118 aaKnown RBP12.25□□□□□ -0.45
NELFE-206ENST00000444811 COLCA2A8K830 154 aa12.24□□□□□ -0.45
NELFE-206ENST00000444811 NDUFA6P56556 154 aa12.24□□□□□ -0.45
NELFE-206ENST00000444811 CKS1BP61024 79 aa12.24□□□□□ -0.45
NELFE-206ENST00000444811 PRR3P79522 188 aaKnown RBP12.24□□□□□ -0.45
NELFE-206ENST00000444811 GAGE2EQ4V326 116 aa12.24□□□□□ -0.45
NELFE-206ENST00000444811 GAGE2DQ9UEU5 116 aa12.24□□□□□ -0.45
NELFE-206ENST00000444811 ATP5LO75964 103 aa12.23□□□□□ -0.45
NELFE-206ENST00000444811 SPINK8P0C7L1 97 aa12.23□□□□□ -0.45
NELFE-206ENST00000444811 FAM168BA1KXE4 195 aa12.22□□□□□ -0.45
NELFE-206ENST00000444811 NDUFC2-KCTD14E9PQ53 114 aa12.22□□□□□ -0.45
NELFE-206ENST00000444811 ZNF22P17026 224 aaPredicted RBP12.21□□□□□ -0.45
NELFE-206ENST00000444811 KRTAP7-1Q8IUC3 87 aa12.21□□□□□ -0.45
NELFE-206ENST00000444811 COX7B2Q8TF08 81 aa12.21□□□□□ -0.45
NELFE-206ENST00000444811 F8VRH5 84 aa12.2□□□□□ -0.46
NELFE-206ENST00000444811 CXCL5P42830 114 aa12.2□□□□□ -0.46
NELFE-206ENST00000444811 LINC00310P59036 64 aa12.2□□□□□ -0.46
NELFE-206ENST00000444811 C9orf129Q5T035 196 aaKnown RBP12.2□□□□□ -0.46
NELFE-206ENST00000444811 PHF5AQ7RTV0 110 aaKnown RBP12.2□□□□□ -0.46
NELFE-206ENST00000444811 BAGE3Q86Y29 109 aa12.19□□□□□ -0.46
NELFE-206ENST00000444811 IGLV5-39A0A0G2JS06 123 aa12.18□□□□□ -0.46
NELFE-206ENST00000444811 H3BRM9 83 aa12.18□□□□□ -0.46
NELFE-206ENST00000444811 C11orf86A6NJI1 115 aa12.17□□□□□ -0.46
NELFE-206ENST00000444811 J3QL48 77 aa12.17□□□□□ -0.46
NELFE-206ENST00000444811 SCO1O75880 301 aa12.17□□□□□ -0.46
NELFE-206ENST00000444811 OXTP01178 125 aa12.17□□□□□ -0.46
NELFE-206ENST00000444811 FAM19A5Q7Z5A7 132 aaPredicted RBP12.17□□□□□ -0.46
NELFE-206ENST00000444811 FAM19A2Q8N3H0 131 aa12.17□□□□□ -0.46
NELFE-206ENST00000444811 HSBP1O75506 76 aa12.16□□□□□ -0.46
NELFE-206ENST00000444811 IFI27L1Q96BM0 104 aa12.16□□□□□ -0.46
NELFE-206ENST00000444811 SERF1AO75920 110 aa12.15□□□□□ -0.46
NELFE-206ENST00000444811 CHTOPQ9Y3Y2 248 aaKnown RBP12.15□□□□□ -0.46
NELFE-206ENST00000444811 TRAV12-1A0A0B4J245 112 aa12.14□□□□□ -0.47
NELFE-206ENST00000444811 KRTAP11-1Q8IUC1 163 aa12.14□□□□□ -0.47
NELFE-206ENST00000444811 NUPR1O60356 82 aa12.13□□□□□ -0.47
NELFE-206ENST00000444811 PSORS1C2Q9UIG4 136 aa12.13□□□□□ -0.47
NELFE-206ENST00000444811 XAGE1AQ9HD64 81 aa12.12□□□□□ -0.47
NELFE-206ENST00000444811 SRSF9Q13242 221 aaKnown RBP eCLIP12.11□□□□□ -0.47
NELFE-206ENST00000444811 TMEM170BQ5T4T1 132 aa12.11□□□□□ -0.47
NELFE-206ENST00000444811 SERTAD4-AS1Q5TG53 156 aa12.11□□□□□ -0.47
NELFE-206ENST00000444811 M0QXV9 152 aa12.1□□□□□ -0.47
NELFE-206ENST00000444811 TMEM223A0PJW6 202 aa12.07□□□□□ -0.48
NELFE-206ENST00000444811 LEPROTL1O95214 131 aa12.07□□□□□ -0.48
NELFE-206ENST00000444811 C1orf137Q5JT78 98 aa12.07□□□□□ -0.48
NELFE-206ENST00000444811 SPINK6Q6UWN8 80 aa12.07□□□□□ -0.48
NELFE-206ENST00000444811 MT1HL1P0DM35 61 aa12.06□□□□□ -0.48
NELFE-206ENST00000444811 ODF1Q14990 250 aa12.06□□□□□ -0.48
NELFE-206ENST00000444811 C22orf24Q9Y442 160 aa12.06□□□□□ -0.48
NELFE-206ENST00000444811 TNXBP22105 4242 aa12.03□□□□□ -0.48
NELFE-206ENST00000444811 H0Y8G0 127 aa12.03□□□□□ -0.48
NELFE-206ENST00000444811 HIST1H2BKO60814 126 aa12.03□□□□□ -0.48
NELFE-206ENST00000444811 HIST1H2BJP06899 126 aa12.03□□□□□ -0.48
NELFE-206ENST00000444811 HIST1H2BOP23527 126 aa12.03□□□□□ -0.48
NELFE-206ENST00000444811 HIST1H2BBP33778 126 aa12.03□□□□□ -0.48
NELFE-206ENST00000444811 HIST1H2BDP58876 126 aa12.03□□□□□ -0.48
NELFE-206ENST00000444811 HIST1H2BCP62807 126 aa12.03□□□□□ -0.48
NELFE-206ENST00000444811 UBE2BP63146 152 aa12.03□□□□□ -0.48
NELFE-206ENST00000444811 HIST2H2BEQ16778 126 aa12.03□□□□□ -0.48
NELFE-206ENST00000444811 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.03□□□□□ -0.48
NELFE-206ENST00000444811 HIST1H2BHQ93079 126 aa12.03□□□□□ -0.48
NELFE-206ENST00000444811 ZNF625Q96I27 306 aaPredicted RBP12.03□□□□□ -0.48
NELFE-206ENST00000444811 HIST1H2BNQ99877 126 aa12.03□□□□□ -0.48
NELFE-206ENST00000444811 HIST1H2BMQ99879 126 aa12.03□□□□□ -0.48
NELFE-206ENST00000444811 FABP4P15090 132 aa12.02□□□□□ -0.49
NELFE-206ENST00000444811 PFN2P35080 140 aa12.02□□□□□ -0.49
NELFE-206ENST00000444811 HSPB8Q9UJY1 196 aa12.02□□□□□ -0.49
NELFE-206ENST00000444811 ERG28Q9UKR5 140 aa12.02□□□□□ -0.49
NELFE-206ENST00000444811 PLA2G2DQ9UNK4 145 aa12.02□□□□□ -0.49
NELFE-206ENST00000444811 IGLV7-43P04211 117 aa12.01□□□□□ -0.49
NELFE-206ENST00000444811 SFTA2Q6UW10 78 aa12□□□□□ -0.49
NELFE-206ENST00000444811 TP73-AS1Q9UF72 201 aa12□□□□□ -0.49
NELFE-206ENST00000444811 LINC01600Q96MT4 127 aa11.99□□□□□ -0.49
NELFE-206ENST00000444811 IGLV5-37A0A075B6J1 123 aa11.98□□□□□ -0.49
NELFE-206ENST00000444811 LBHQ53QV2 105 aaPredicted RBP11.98□□□□□ -0.49
NELFE-206ENST00000444811 MRPL55Q7Z7F7 128 aaKnown RBP11.98□□□□□ -0.49
NELFE-206ENST00000444811 COX17Q14061 63 aa11.97□□□□□ -0.49
NELFE-206ENST00000444811 REG3GQ6UW15 175 aa11.96□□□□□ -0.49
NELFE-206ENST00000444811 SND1-IT1Q9HBX3 110 aa11.96□□□□□ -0.49
NELFE-206ENST00000444811 LINC00167Q96N53 147 aa11.95□□□□□ -0.5
NELFE-206ENST00000444811 PMCHL2Q9BQD1 86 aa11.95□□□□□ -0.5
NELFE-206ENST00000444811 DPM2O94777 84 aa11.93□□□□□ -0.5
NELFE-206ENST00000444811 PLNP26678 52 aa11.93□□□□□ -0.5
NELFE-206ENST00000444811 TSPEAR-AS2P59090 65 aa11.93□□□□□ -0.5
NELFE-206ENST00000444811 Q8NDZ9 215 aa11.93□□□□□ -0.5
NELFE-206ENST00000444811 VPREB1P12018 145 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms