RNA–Protein interactions for RNA: ENST00000444481.3

VCX3B-203, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 812 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-203ENST00000444481 TOMM7Q9P0U1 55 aa11.21□□□□□ -0.61
VCX3B-203ENST00000444481 CDKN2A-AS1Q9UH64 79 aa11.21□□□□□ -0.61
VCX3B-203ENST00000444481 MRPL18Q9H0U6 180 aaKnown RBP11.2□□□□□ -0.62
VCX3B-203ENST00000444481 FAM168BA1KXE4 195 aa11.19□□□□□ -0.62
VCX3B-203ENST00000444481 FABP9Q0Z7S8 132 aa11.19□□□□□ -0.62
VCX3B-203ENST00000444481 C1orf137Q5JT78 98 aa11.19□□□□□ -0.62
VCX3B-203ENST00000444481 TINCRA0A1B0GVN0 87 aa11.18□□□□□ -0.62
VCX3B-203ENST00000444481 FA2HQ7L5A8 372 aa11.18□□□□□ -0.62
VCX3B-203ENST00000444481 FAM19A5Q7Z5A7 132 aaPredicted RBP11.18□□□□□ -0.62
VCX3B-203ENST00000444481 SMCO4Q9NRQ5 59 aa11.18□□□□□ -0.62
VCX3B-203ENST00000444481 TNXBP22105 4242 aa11.18□□□□□ -0.62
VCX3B-203ENST00000444481 CXCL5P42830 114 aa11.17□□□□□ -0.62
VCX3B-203ENST00000444481 KRTAP10-8P60410 259 aa11.17□□□□□ -0.62
VCX3B-203ENST00000444481 C9orf129Q5T035 196 aaKnown RBP11.16□□□□□ -0.62
VCX3B-203ENST00000444481 LINC00469Q8N7U9 141 aa11.16□□□□□ -0.62
VCX3B-203ENST00000444481 IGLV5-45A0A087WSX0 123 aa11.15□□□□□ -0.62
VCX3B-203ENST00000444481 F8VRH5 84 aa11.15□□□□□ -0.62
VCX3B-203ENST00000444481 M0QXV9 152 aa11.15□□□□□ -0.62
VCX3B-203ENST00000444481 IGLV7-43P04211 117 aa11.15□□□□□ -0.62
VCX3B-203ENST00000444481 PDZD11Q5EBL8 140 aa11.15□□□□□ -0.62
VCX3B-203ENST00000444481 KRTAP7-1Q8IUC3 87 aa11.15□□□□□ -0.62
VCX3B-203ENST00000444481 CST9LQ9H4G1 147 aa11.15□□□□□ -0.62
VCX3B-203ENST00000444481 PMVKQ15126 192 aa11.14□□□□□ -0.63
VCX3B-203ENST00000444481 SMIM1B2RUZ4 78 aa11.13□□□□□ -0.63
VCX3B-203ENST00000444481 ODF1Q14990 250 aa11.13□□□□□ -0.63
VCX3B-203ENST00000444481 TRAPPC1Q9Y5R8 145 aa11.13□□□□□ -0.63
VCX3B-203ENST00000444481 UBE2BP63146 152 aa11.12□□□□□ -0.63
VCX3B-203ENST00000444481 NDUFA5Q16718 116 aa11.12□□□□□ -0.63
VCX3B-203ENST00000444481 DIRC1Q969H9 104 aa11.12□□□□□ -0.63
VCX3B-203ENST00000444481 SNAPINO95295 136 aa11.11□□□□□ -0.63
VCX3B-203ENST00000444481 APOC3P02656 99 aa11.11□□□□□ -0.63
VCX3B-203ENST00000444481 KRTAP11-1Q8IUC1 163 aa11.11□□□□□ -0.63
VCX3B-203ENST00000444481 COX7B2Q8TF08 81 aa11.11□□□□□ -0.63
VCX3B-203ENST00000444481 LINC00614P0C842 121 aa11.1□□□□□ -0.63
VCX3B-203ENST00000444481 SVBPQ8N300 66 aa11.1□□□□□ -0.63
VCX3B-203ENST00000444481 H3BRM9 83 aa11.09□□□□□ -0.63
VCX3B-203ENST00000444481 C18orf32Q8TCD1 76 aa11.09□□□□□ -0.63
VCX3B-203ENST00000444481 LBHQ53QV2 105 aaPredicted RBP11.08□□□□□ -0.64
VCX3B-203ENST00000444481 XAGE1AQ9HD64 81 aa11.08□□□□□ -0.64
VCX3B-203ENST00000444481 H0Y9J4 135 aa11.07□□□□□ -0.64
VCX3B-203ENST00000444481 RAB5BP61020 215 aa11.07□□□□□ -0.64
VCX3B-203ENST00000444481 URB1-AS1Q96HZ7 61 aa11.07□□□□□ -0.64
VCX3B-203ENST00000444481 C22orf24Q9Y442 160 aa11.07□□□□□ -0.64
VCX3B-203ENST00000444481 A0A096LNJ9 63 aa11.06□□□□□ -0.64
VCX3B-203ENST00000444481 HBDP02042 147 aa11.06□□□□□ -0.64
VCX3B-203ENST00000444481 SPINK8P0C7L1 97 aa11.06□□□□□ -0.64
VCX3B-203ENST00000444481 IGLC3P0DOY3 106 aa11.06□□□□□ -0.64
VCX3B-203ENST00000444481 TP73-AS1Q9UF72 201 aa11.06□□□□□ -0.64
VCX3B-203ENST00000444481 NUPR1O60356 82 aa11.04□□□□□ -0.64
VCX3B-203ENST00000444481 ATP5LO75964 103 aa11.03□□□□□ -0.64
VCX3B-203ENST00000444481 NDUFA6P56556 154 aa11.03□□□□□ -0.64
VCX3B-203ENST00000444481 IGLV5-39A0A0G2JS06 123 aa11.01□□□□□ -0.65
VCX3B-203ENST00000444481 MRPL55Q7Z7F7 128 aaKnown RBP11.01□□□□□ -0.65
VCX3B-203ENST00000444481 ZNF861PO60384 105 aa11□□□□□ -0.65
VCX3B-203ENST00000444481 ZNF22P17026 224 aaPredicted RBP11□□□□□ -0.65
VCX3B-203ENST00000444481 IGLV1-50A0A075B6I6 118 aa10.99□□□□□ -0.65
VCX3B-203ENST00000444481 PMCHL1Q16048 86 aa10.99□□□□□ -0.65
VCX3B-203ENST00000444481 UBR4Q5T4S7 5183 aa10.99□□□□□ -0.65
VCX3B-203ENST00000444481 BAGE3Q86Y29 109 aa10.98□□□□□ -0.65
VCX3B-203ENST00000444481 PRR26Q8N8Z3 221 aa10.98□□□□□ -0.65
VCX3B-203ENST00000444481 YPEL4Q96NS1 127 aa10.98□□□□□ -0.65
VCX3B-203ENST00000444481 IGLV5-37A0A075B6J1 123 aa10.97□□□□□ -0.65
VCX3B-203ENST00000444481 KRTAP1-4P0C5Y4 121 aa10.97□□□□□ -0.65
VCX3B-203ENST00000444481 CHCHD1Q96BP2 118 aaKnown RBP10.97□□□□□ -0.65
VCX3B-203ENST00000444481 SFTA2Q6UW10 78 aa10.96□□□□□ -0.65
VCX3B-203ENST00000444481 COX17Q14061 63 aa10.95□□□□□ -0.66
VCX3B-203ENST00000444481 LINC00167Q96N53 147 aa10.95□□□□□ -0.66
VCX3B-203ENST00000444481 C11orf86A6NJI1 115 aa10.94□□□□□ -0.66
VCX3B-203ENST00000444481 BCE1O60756 84 aa10.94□□□□□ -0.66
VCX3B-203ENST00000444481 RPL13AP40429 203 aaKnown RBP10.94□□□□□ -0.66
VCX3B-203ENST00000444481 TMEM170BQ5T4T1 132 aa10.94□□□□□ -0.66
VCX3B-203ENST00000444481 NKAPP1Q8N9T2 125 aa10.94□□□□□ -0.66
VCX3B-203ENST00000444481 PFN2P35080 140 aa10.93□□□□□ -0.66
VCX3B-203ENST00000444481 RPL28P46779 137 aaKnown RBP10.93□□□□□ -0.66
VCX3B-203ENST00000444481 ERG28Q9UKR5 140 aa10.93□□□□□ -0.66
VCX3B-203ENST00000444481 CHTOPQ9Y3Y2 248 aaKnown RBP10.93□□□□□ -0.66
VCX3B-203ENST00000444481 TRAV12-1A0A0B4J245 112 aa10.92□□□□□ -0.66
VCX3B-203ENST00000444481 LRP2P98164 4655 aa10.91□□□□□ -0.66
VCX3B-203ENST00000444481 RPL37AP8A6NKH3 93 aa10.91□□□□□ -0.66
VCX3B-203ENST00000444481 IFI27L1Q96BM0 104 aa10.91□□□□□ -0.66
VCX3B-203ENST00000444481 GAGE10A6NGK3 116 aa10.89□□□□□ -0.67
VCX3B-203ENST00000444481 SND1-IT1Q9HBX3 110 aa10.89□□□□□ -0.67
VCX3B-203ENST00000444481 HSBP1O75506 76 aa10.88□□□□□ -0.67
VCX3B-203ENST00000444481 RPL24P83731 157 aaKnown RBP10.88□□□□□ -0.67
VCX3B-203ENST00000444481 CBLN2Q8IUK8 224 aa10.88□□□□□ -0.67
VCX3B-203ENST00000444481 ZNF625Q96I27 306 aaPredicted RBP10.88□□□□□ -0.67
VCX3B-203ENST00000444481 TMEM223A0PJW6 202 aa10.87□□□□□ -0.67
VCX3B-203ENST00000444481 VPREB1P12018 145 aa10.86□□□□□ -0.67
VCX3B-203ENST00000444481 IGKV2-28A0A075B6P5 120 aa10.83□□□□□ -0.68
VCX3B-203ENST00000444481 IGKV2D-28P01615 120 aa10.83□□□□□ -0.68
VCX3B-203ENST00000444481 TRGC2P03986 189 aa10.83□□□□□ -0.68
VCX3B-203ENST00000444481 UBE2AP49459 152 aa10.83□□□□□ -0.68
VCX3B-203ENST00000444481 KRTAP13-1Q8IUC0 172 aa10.83□□□□□ -0.68
VCX3B-203ENST00000444481 FAM19A2Q8N3H0 131 aa10.83□□□□□ -0.68
VCX3B-203ENST00000444481 SCO1O75880 301 aa10.82□□□□□ -0.68
VCX3B-203ENST00000444481 LINC00158P58513 81 aa10.82□□□□□ -0.68
VCX3B-203ENST00000444481 CRYGAP11844 174 aa10.81□□□□□ -0.68
VCX3B-203ENST00000444481 TMEM126AQ9H061 195 aa10.8□□□□□ -0.68
VCX3B-203ENST00000444481 LINC00587B1AMM8 73 aa10.79□□□□□ -0.68
VCX3B-203ENST00000444481 LEPROTL1O95214 131 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms