RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 PDZD11Q5EBL8 140 aa13.61□□□□□ -0.23
TRAF4-205ENST00000444415 Q8IZM0 81 aa13.61□□□□□ -0.23
TRAF4-205ENST00000444415 GEMIN7Q9H840 131 aaKnown RBP13.61□□□□□ -0.23
TRAF4-205ENST00000444415 HBDP02042 147 aa13.6□□□□□ -0.23
TRAF4-205ENST00000444415 C7orf33Q8WU49 177 aa13.6□□□□□ -0.23
TRAF4-205ENST00000444415 TRBV30A0A0K0K1B3 111 aa13.59□□□□□ -0.23
TRAF4-205ENST00000444415 PRR3P79522 188 aaKnown RBP13.59□□□□□ -0.23
TRAF4-205ENST00000444415 LINC00469Q8N7U9 141 aa13.59□□□□□ -0.23
TRAF4-205ENST00000444415 TOMM7Q9P0U1 55 aa13.59□□□□□ -0.23
TRAF4-205ENST00000444415 KRTAP7-1Q8IUC3 87 aa13.58□□□□□ -0.24
TRAF4-205ENST00000444415 FAM168BA1KXE4 195 aa13.57□□□□□ -0.24
TRAF4-205ENST00000444415 PACRGQ96M98 296 aaPredicted RBP13.55□□□□□ -0.24
TRAF4-205ENST00000444415 IGLC3P0DOY3 106 aa13.55□□□□□ -0.24
TRAF4-205ENST00000444415 RAB5BP61020 215 aa13.55□□□□□ -0.24
TRAF4-205ENST00000444415 GAGE2EQ4V326 116 aa13.55□□□□□ -0.24
TRAF4-205ENST00000444415 GAGE2DQ9UEU5 116 aa13.55□□□□□ -0.24
TRAF4-205ENST00000444415 NDUFC2-KCTD14E9PQ53 114 aa13.54□□□□□ -0.24
TRAF4-205ENST00000444415 TRGC2P03986 189 aa13.54□□□□□ -0.24
TRAF4-205ENST00000444415 PRSS2P07478 247 aa13.54□□□□□ -0.24
TRAF4-205ENST00000444415 SPINK8P0C7L1 97 aa13.54□□□□□ -0.24
TRAF4-205ENST00000444415 C6orf226Q5I0X4 101 aa13.54□□□□□ -0.24
TRAF4-205ENST00000444415 C9orf129Q5T035 196 aaKnown RBP13.53□□□□□ -0.24
TRAF4-205ENST00000444415 PHF5AQ7RTV0 110 aaKnown RBP13.53□□□□□ -0.24
TRAF4-205ENST00000444415 LINC00310P59036 64 aa13.52□□□□□ -0.25
TRAF4-205ENST00000444415 CKS1BP61024 79 aa13.52□□□□□ -0.25
TRAF4-205ENST00000444415 COLCA2A8K830 154 aa13.51□□□□□ -0.25
TRAF4-205ENST00000444415 KRTAP11-1Q8IUC1 163 aa13.51□□□□□ -0.25
TRAF4-205ENST00000444415 CHCHD1Q96BP2 118 aaKnown RBP13.51□□□□□ -0.25
TRAF4-205ENST00000444415 J3QL48 77 aa13.5□□□□□ -0.25
TRAF4-205ENST00000444415 ZNF22P17026 224 aaPredicted RBP13.5□□□□□ -0.25
TRAF4-205ENST00000444415 F8VRH5 84 aa13.49□□□□□ -0.25
TRAF4-205ENST00000444415 OXTP01178 125 aa13.49□□□□□ -0.25
TRAF4-205ENST00000444415 NDUFA6P56556 154 aa13.49□□□□□ -0.25
TRAF4-205ENST00000444415 COX7B2Q8TF08 81 aa13.49□□□□□ -0.25
TRAF4-205ENST00000444415 ATP5LO75964 103 aa13.48□□□□□ -0.25
TRAF4-205ENST00000444415 IGLV5-39A0A0G2JS06 123 aa13.48□□□□□ -0.25
TRAF4-205ENST00000444415 C11orf86A6NJI1 115 aa13.48□□□□□ -0.25
TRAF4-205ENST00000444415 FAM19A5Q7Z5A7 132 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-205ENST00000444415 CXCL5P42830 114 aa13.47□□□□□ -0.25
TRAF4-205ENST00000444415 BAGE3Q86Y29 109 aa13.47□□□□□ -0.25
TRAF4-205ENST00000444415 PSORS1C2Q9UIG4 136 aa13.47□□□□□ -0.25
TRAF4-205ENST00000444415 FAM19A2Q8N3H0 131 aa13.46□□□□□ -0.25
TRAF4-205ENST00000444415 HMCN2Q8NDA2 5059 aa13.46□□□□□ -0.26
TRAF4-205ENST00000444415 SCO1O75880 301 aa13.45□□□□□ -0.26
TRAF4-205ENST00000444415 MT1HL1P0DM35 61 aa13.45□□□□□ -0.26
TRAF4-205ENST00000444415 SRSF9Q13242 221 aaKnown RBP eCLIP13.44□□□□□ -0.262e-6■■■□□ 16.3
TRAF4-205ENST00000444415 H3BRM9 83 aa13.43□□□□□ -0.26
TRAF4-205ENST00000444415 SERTAD4-AS1Q5TG53 156 aa13.43□□□□□ -0.26
TRAF4-205ENST00000444415 XAGE1AQ9HD64 81 aa13.43□□□□□ -0.26
TRAF4-205ENST00000444415 NUPR1O60356 82 aa13.42□□□□□ -0.26
TRAF4-205ENST00000444415 IFI27L1Q96BM0 104 aa13.42□□□□□ -0.26
TRAF4-205ENST00000444415 SERF1AO75920 110 aa13.42□□□□□ -0.26
TRAF4-205ENST00000444415 M0QXV9 152 aa13.41□□□□□ -0.26
TRAF4-205ENST00000444415 HSBP1O75506 76 aa13.41□□□□□ -0.26
TRAF4-205ENST00000444415 CHTOPQ9Y3Y2 248 aaKnown RBP13.41□□□□□ -0.26
TRAF4-205ENST00000444415 TRAV12-1A0A0B4J245 112 aa13.4□□□□□ -0.26
TRAF4-205ENST00000444415 TMEM170BQ5T4T1 132 aa13.37□□□□□ -0.27
TRAF4-205ENST00000444415 SPINK6Q6UWN8 80 aa13.37□□□□□ -0.27
TRAF4-205ENST00000444415 C1orf137Q5JT78 98 aa13.36□□□□□ -0.27
TRAF4-205ENST00000444415 TMEM223A0PJW6 202 aa13.34□□□□□ -0.27
TRAF4-205ENST00000444415 ODF1Q14990 250 aa13.34□□□□□ -0.27
TRAF4-205ENST00000444415 C22orf24Q9Y442 160 aa13.34□□□□□ -0.27
TRAF4-205ENST00000444415 ZNF625Q96I27 306 aaPredicted RBP13.33□□□□□ -0.28
TRAF4-205ENST00000444415 LEPROTL1O95214 131 aa13.31□□□□□ -0.28
TRAF4-205ENST00000444415 IGLV7-43P04211 117 aa13.31□□□□□ -0.28
TRAF4-205ENST00000444415 LINC01600Q96MT4 127 aa13.31□□□□□ -0.28
TRAF4-205ENST00000444415 HIST1H2BKO60814 126 aa13.29□□□□□ -0.28
TRAF4-205ENST00000444415 HIST1H2BJP06899 126 aa13.29□□□□□ -0.28
TRAF4-205ENST00000444415 HIST1H2BOP23527 126 aa13.29□□□□□ -0.28
TRAF4-205ENST00000444415 HIST1H2BBP33778 126 aa13.29□□□□□ -0.28
TRAF4-205ENST00000444415 PFN2P35080 140 aa13.29□□□□□ -0.28
TRAF4-205ENST00000444415 HIST1H2BDP58876 126 aa13.29□□□□□ -0.28
TRAF4-205ENST00000444415 HIST1H2BCP62807 126 aa13.29□□□□□ -0.28
TRAF4-205ENST00000444415 UBE2BP63146 152 aa13.29□□□□□ -0.28
TRAF4-205ENST00000444415 HIST2H2BEQ16778 126 aa13.29□□□□□ -0.28
TRAF4-205ENST00000444415 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-205ENST00000444415 HIST1H2BHQ93079 126 aa13.29□□□□□ -0.28
TRAF4-205ENST00000444415 HIST1H2BNQ99877 126 aa13.29□□□□□ -0.28
TRAF4-205ENST00000444415 HIST1H2BMQ99879 126 aa13.29□□□□□ -0.28
TRAF4-205ENST00000444415 H0Y8G0 127 aa13.29□□□□□ -0.28
TRAF4-205ENST00000444415 ERG28Q9UKR5 140 aa13.29□□□□□ -0.28
TRAF4-205ENST00000444415 PLA2G2DQ9UNK4 145 aa13.29□□□□□ -0.28
TRAF4-205ENST00000444415 TP73-AS1Q9UF72 201 aa13.28□□□□□ -0.28
TRAF4-205ENST00000444415 FABP4P15090 132 aa13.27□□□□□ -0.29
TRAF4-205ENST00000444415 IGLV5-37A0A075B6J1 123 aa13.26□□□□□ -0.29
TRAF4-205ENST00000444415 MRPL55Q7Z7F7 128 aaKnown RBP13.26□□□□□ -0.29
TRAF4-205ENST00000444415 Q8NDZ9 215 aa13.26□□□□□ -0.29
TRAF4-205ENST00000444415 SND1-IT1Q9HBX3 110 aa13.24□□□□□ -0.29
TRAF4-205ENST00000444415 KRTAP10-8P60410 259 aa13.23□□□□□ -0.29
TRAF4-205ENST00000444415 REG3GQ6UW15 175 aa13.23□□□□□ -0.29
TRAF4-205ENST00000444415 LINC00167Q96N53 147 aa13.23□□□□□ -0.29
TRAF4-205ENST00000444415 PMCHL2Q9BQD1 86 aa13.23□□□□□ -0.29
TRAF4-205ENST00000444415 HSPB8Q9UJY1 196 aa13.23□□□□□ -0.29
TRAF4-205ENST00000444415 COX17Q14061 63 aa13.23□□□□□ -0.29
TRAF4-205ENST00000444415 TSPEAR-AS2P59090 65 aa13.22□□□□□ -0.29
TRAF4-205ENST00000444415 LBHQ53QV2 105 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-205ENST00000444415 VPREB1P12018 145 aa13.21□□□□□ -0.3
TRAF4-205ENST00000444415 SFTA2Q6UW10 78 aa13.21□□□□□ -0.3
TRAF4-205ENST00000444415 GAGE10A6NGK3 116 aa13.2□□□□□ -0.3
TRAF4-205ENST00000444415 H0Y9J4 135 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms