RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 CMC4P56277 68 aaPredicted RBP3.55□□□□□ -1.84
HERC1-201ENST00000443617 LYPD5Q6UWN5 251 aa3.55□□□□□ -1.84
HERC1-201ENST00000443617 DEFB130BP0DP73 79 aa3.55□□□□□ -1.84
HERC1-201ENST00000443617 DEFB130AP0DP74 79 aa3.55□□□□□ -1.84
HERC1-201ENST00000443617 SLURP1P55000 103 aa3.55□□□□□ -1.84
HERC1-201ENST00000443617 SCXQ7RTU7 201 aa3.55□□□□□ -1.84
HERC1-201ENST00000443617 PRUNE2Q8WUY3 3088 aa3.55□□□□□ -1.84
HERC1-201ENST00000443617 Q8NA96 180 aa3.54□□□□□ -1.84
HERC1-201ENST00000443617 CR1P17927 2039 aa3.54□□□□□ -1.84
HERC1-201ENST00000443617 LAMA3Q16787 3333 aa3.54□□□□□ -1.84
HERC1-201ENST00000443617 LINC00575Q6W349 94 aa3.54□□□□□ -1.84
HERC1-201ENST00000443617 ZNF843Q8N446 348 aa3.54□□□□□ -1.84
HERC1-201ENST00000443617 MSMBP08118 114 aa3.54□□□□□ -1.84
HERC1-201ENST00000443617 BRCA2P51587 3418 aa3.54□□□□□ -1.84
HERC1-201ENST00000443617 PMAIP1Q13794 54 aa3.54□□□□□ -1.84
HERC1-201ENST00000443617 IGHV4-61A0A0C4DH41 118 aa3.54□□□□□ -1.84
HERC1-201ENST00000443617 Q8N3U1 123 aa3.54□□□□□ -1.84
HERC1-201ENST00000443617 BAHCC1Q9P281 2608 aa3.54□□□□□ -1.84
HERC1-201ENST00000443617 UNC80Q8N2C7 3258 aa3.54□□□□□ -1.84
HERC1-201ENST00000443617 FAM19A3Q7Z5A8 133 aa3.53□□□□□ -1.84
HERC1-201ENST00000443617 ERC2-IT1O76042 136 aa3.53□□□□□ -1.84
HERC1-201ENST00000443617 Q6ZVQ6 151 aa3.53□□□□□ -1.84
HERC1-201ENST00000443617 IGHV3OR16-9A0A0B4J2B5 98 aa3.53□□□□□ -1.84
HERC1-201ENST00000443617 GYPEP15421 78 aa3.53□□□□□ -1.84
HERC1-201ENST00000443617 DEFB136Q30KP8 78 aa3.53□□□□□ -1.84
HERC1-201ENST00000443617 ESRGQ1W209 222 aa3.53□□□□□ -1.84
HERC1-201ENST00000443617 KLKP1Q107X0 134 aa3.53□□□□□ -1.84
HERC1-201ENST00000443617 Q96MF0 132 aa3.53□□□□□ -1.84
HERC1-201ENST00000443617 J3QKU1 62 aa3.53□□□□□ -1.84
HERC1-201ENST00000443617 COX7BP24311 80 aa3.53□□□□□ -1.84
HERC1-201ENST00000443617 TRBV6-8A0A0A6YYG3 113 aa3.53□□□□□ -1.85
HERC1-201ENST00000443617 Q6ZQT0 140 aa3.53□□□□□ -1.85
HERC1-201ENST00000443617 LINC00482Q8N8I6 264 aa3.53□□□□□ -1.85
HERC1-201ENST00000443617 DNAH14Q0VDD8 3507 aa3.52□□□□□ -1.85
HERC1-201ENST00000443617 TACC2O95359 2948 aa3.52□□□□□ -1.85
HERC1-201ENST00000443617 LY6G6DO95868 133 aa3.52□□□□□ -1.85
HERC1-201ENST00000443617 DEFB114Q30KQ6 69 aa3.52□□□□□ -1.85
HERC1-201ENST00000443617 COX17Q14061 63 aa3.52□□□□□ -1.85
HERC1-201ENST00000443617 NBEAL1Q6ZS30 2694 aa3.52□□□□□ -1.85
HERC1-201ENST00000443617 CLPSL2Q6UWE3 100 aa3.52□□□□□ -1.85
HERC1-201ENST00000443617 HTN3P15516 51 aa3.52□□□□□ -1.85
HERC1-201ENST00000443617 CHCHD10Q8WYQ3 142 aaPredicted RBP3.52□□□□□ -1.85
HERC1-201ENST00000443617 C10orf99Q6UWK7 81 aa3.52□□□□□ -1.85
HERC1-201ENST00000443617 SPATA3Q8NHX4 192 aa3.52□□□□□ -1.85
HERC1-201ENST00000443617 KALRNO60229 2985 aa3.52□□□□□ -1.85
HERC1-201ENST00000443617 C6orf99Q4VX62 202 aa3.52□□□□□ -1.85
HERC1-201ENST00000443617 UTP20O75691 2785 aaKnown RBP3.52□□□□□ -1.85
HERC1-201ENST00000443617 A0A1W2PRX2 142 aa3.52□□□□□ -1.85
HERC1-201ENST00000443617 C16orf74Q96GX8 76 aa3.52□□□□□ -1.85
HERC1-201ENST00000443617 LINC00167Q96N53 147 aa3.52□□□□□ -1.85
HERC1-201ENST00000443617 DSCR9P59020 149 aa3.52□□□□□ -1.85
HERC1-201ENST00000443617 XIRP2A4UGR9 3374 aa3.51□□□□□ -1.85
HERC1-201ENST00000443617 LINC00959A0A1B0GUT2 108 aa3.51□□□□□ -1.85
HERC1-201ENST00000443617 PSPHP1O15172 72 aa3.51□□□□□ -1.85
HERC1-201ENST00000443617 FP248Q71RG6 208 aaPredicted RBP3.51□□□□□ -1.85
HERC1-201ENST00000443617 A8MTW9 85 aa3.51□□□□□ -1.85
HERC1-201ENST00000443617 CCL24O00175 119 aa3.51□□□□□ -1.85
HERC1-201ENST00000443617 ADORA2A-AS1P86434 159 aa3.51□□□□□ -1.85
HERC1-201ENST00000443617 CDSNQ15517 529 aa3.51□□□□□ -1.85
HERC1-201ENST00000443617 LINC01356Q8N9X3 169 aa3.51□□□□□ -1.85
HERC1-201ENST00000443617 C9orf116Q5BN46 136 aaPredicted RBP3.51□□□□□ -1.85
HERC1-201ENST00000443617 PRYO14603 147 aa3.51□□□□□ -1.85
HERC1-201ENST00000443617 CD164L2Q6UWJ8 174 aa3.51□□□□□ -1.85
HERC1-201ENST00000443617 COL27A1Q8IZC6 1860 aaPredicted RBP3.51□□□□□ -1.85
HERC1-201ENST00000443617 Q8IZM0 81 aa3.51□□□□□ -1.85
HERC1-201ENST00000443617 TM2D3Q9BRN9 247 aa3.51□□□□□ -1.85
HERC1-201ENST00000443617 EPM2AB3EWF7 344 aa3.51□□□□□ -1.85
HERC1-201ENST00000443617 MAP6D1Q9H9H5 199 aa3.51□□□□□ -1.85
HERC1-201ENST00000443617 DEFB112Q30KQ8 113 aa3.51□□□□□ -1.85
HERC1-201ENST00000443617 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.51□□□□□ -1.85
HERC1-201ENST00000443617 Q6ZQY7 126 aa3.51□□□□□ -1.85
HERC1-201ENST00000443617 FLNCQ14315 2725 aa3.5□□□□□ -1.85
HERC1-201ENST00000443617 LRCOL1A6NCL2 159 aa3.5□□□□□ -1.85
HERC1-201ENST00000443617 MUC7Q8TAX7 377 aa3.5□□□□□ -1.85
HERC1-201ENST00000443617 SETXQ7Z333 2677 aaKnown RBP3.5□□□□□ -1.85
HERC1-201ENST00000443617 UBR5O95071 2799 aaPredicted RBP3.5□□□□□ -1.85
HERC1-201ENST00000443617 LINC00269Q8N2A0 174 aa3.5□□□□□ -1.85
HERC1-201ENST00000443617 IGLV10-54A0A075B6I4 117 aa3.5□□□□□ -1.85
HERC1-201ENST00000443617 PLAC8L1A1L4L8 177 aa3.5□□□□□ -1.85
HERC1-201ENST00000443617 ZNF73O43830 326 aaPredicted RBP3.5□□□□□ -1.85
HERC1-201ENST00000443617 C4orf3Q8WVX3 66 aa3.5□□□□□ -1.85
HERC1-201ENST00000443617 DIRC1Q969H9 104 aa3.5□□□□□ -1.85
HERC1-201ENST00000443617 ANGP03950 147 aaKnown RBP3.5□□□□□ -1.85
HERC1-201ENST00000443617 SPTBN5Q9NRC6 3674 aaKnown RBP3.5□□□□□ -1.85
HERC1-201ENST00000443617 IGLV4-60A0A075B6I1 120 aa3.49□□□□□ -1.85
HERC1-201ENST00000443617 LYRM9A8MSI8 78 aa3.49□□□□□ -1.85
HERC1-201ENST00000443617 MP68P56378 58 aa3.49□□□□□ -1.85
HERC1-201ENST00000443617 MRPL55Q7Z7F7 128 aaKnown RBP3.49□□□□□ -1.85
HERC1-201ENST00000443617 C16orf95Q9H693 158 aa3.49□□□□□ -1.85
HERC1-201ENST00000443617 LOC100131303A0A0U1RQF7 123 aa3.49□□□□□ -1.85
HERC1-201ENST00000443617 VPREB1P12018 145 aa3.49□□□□□ -1.85
HERC1-201ENST00000443617 AVPP01185 164 aa3.49□□□□□ -1.85
HERC1-201ENST00000443617 DEFB105AQ8NG35 78 aa3.49□□□□□ -1.85
HERC1-201ENST00000443617 IL17DQ8TAD2 202 aa3.49□□□□□ -1.85
HERC1-201ENST00000443617 DMBT1Q9UGM3 2413 aaPredicted RBP3.48□□□□□ -1.85
HERC1-201ENST00000443617 C6orf223Q8N319 242 aa3.48□□□□□ -1.85
HERC1-201ENST00000443617 Q8N9L7 120 aa3.48□□□□□ -1.85
HERC1-201ENST00000443617 C1orf158Q8N1D5 194 aa3.48□□□□□ -1.85
HERC1-201ENST00000443617 IGHV4-30-2A0A087WSY4 118 aa3.48□□□□□ -1.85
HERC1-201ENST00000443617 MKI67P46013 3256 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms