RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 FAM110AQ9BQ89 295 aa11.71□□□□□ -0.54
TTC3-209ENST00000438055 A0A087WZ39 114 aa11.7□□□□□ -0.54
TTC3-209ENST00000438055 LECT2O14960 151 aa11.69□□□□□ -0.54
TTC3-209ENST00000438055 LINC00269Q8N2A0 174 aa11.69□□□□□ -0.54
TTC3-209ENST00000438055 IBA57-AS1B1ANH7 110 aa11.69□□□□□ -0.54
TTC3-209ENST00000438055 DAD1P61803 113 aa11.68□□□□□ -0.54
TTC3-209ENST00000438055 SS18L2Q9UHA2 77 aa11.68□□□□□ -0.54
TTC3-209ENST00000438055 IGKV2-28A0A075B6P5 120 aa11.67□□□□□ -0.54
TTC3-209ENST00000438055 IGKV2D-28P01615 120 aa11.67□□□□□ -0.54
TTC3-209ENST00000438055 SLPIP03973 132 aa11.67□□□□□ -0.54
TTC3-209ENST00000438055 A0A087WYN8 130 aa11.67□□□□□ -0.54
TTC3-209ENST00000438055 INAFM2P0DMQ5 153 aa11.66□□□□□ -0.54
TTC3-209ENST00000438055 RPL28P46779 137 aaKnown RBP11.66□□□□□ -0.54
TTC3-209ENST00000438055 PRR3P79522 188 aaKnown RBP11.65□□□□□ -0.54
TTC3-209ENST00000438055 KIR2DL5BQ8NHK3 375 aa11.65□□□□□ -0.54
TTC3-209ENST00000438055 KRTAP10-3P60369 221 aa11.65□□□□□ -0.54
TTC3-209ENST00000438055 Q8N3U1 123 aa11.65□□□□□ -0.54
TTC3-209ENST00000438055 C14orf132Q9NPU4 83 aa11.65□□□□□ -0.55
TTC3-209ENST00000438055 FAM240AA0A1B0GVK7 77 aa11.64□□□□□ -0.55
TTC3-209ENST00000438055 CCDC179H3BU77 68 aa11.64□□□□□ -0.55
TTC3-209ENST00000438055 LY6G6DO95868 133 aa11.64□□□□□ -0.55
TTC3-209ENST00000438055 X6R8D5 127 aa11.63□□□□□ -0.55
TTC3-209ENST00000438055 FAM236AA0A1B0GUQ0 79 aa11.63□□□□□ -0.55
TTC3-209ENST00000438055 FAM236BA0A1B0GV22 79 aa11.63□□□□□ -0.55
TTC3-209ENST00000438055 INAFM1C9JVW0 142 aa11.63□□□□□ -0.55
TTC3-209ENST00000438055 ACYP1P07311 99 aa11.63□□□□□ -0.55
TTC3-209ENST00000438055 SPATA3Q8NHX4 192 aa11.63□□□□□ -0.55
TTC3-209ENST00000438055 H0YGX0 51 aa11.62□□□□□ -0.55
TTC3-209ENST00000438055 C3orf56Q8N813 242 aa11.62□□□□□ -0.55
TTC3-209ENST00000438055 LINC00526Q96FQ7 95 aa11.62□□□□□ -0.55
TTC3-209ENST00000438055 CHCHD10Q8WYQ3 142 aaPredicted RBP11.62□□□□□ -0.55
TTC3-209ENST00000438055 C9orf116Q5BN46 136 aaPredicted RBP11.62□□□□□ -0.55
TTC3-209ENST00000438055 LINC01600Q96MT4 127 aa11.61□□□□□ -0.55
TTC3-209ENST00000438055 C9orf66Q5T8R8 295 aa11.61□□□□□ -0.55
TTC3-209ENST00000438055 NHLRC4P0CG21 123 aaPredicted RBP11.61□□□□□ -0.55
TTC3-209ENST00000438055 REG3AQ06141 175 aa11.6□□□□□ -0.55
TTC3-209ENST00000438055 IGHV4-28A0A0C4DH34 117 aa11.6□□□□□ -0.55
TTC3-209ENST00000438055 AKAP9Q99996 3911 aa11.6□□□□□ -0.55
TTC3-209ENST00000438055 VWFP04275 2813 aa11.6□□□□□ -0.55
TTC3-209ENST00000438055 NCR3O14931 201 aa11.59□□□□□ -0.55
TTC3-209ENST00000438055 MRPL23Q16540 153 aaKnown RBP11.59□□□□□ -0.55
TTC3-209ENST00000438055 Q6Q795 121 aa11.59□□□□□ -0.55
TTC3-209ENST00000438055 APOC4P55056 127 aa11.59□□□□□ -0.55
TTC3-209ENST00000438055 DEFB121Q5J5C9 76 aa11.59□□□□□ -0.55
TTC3-209ENST00000438055 S100A7L2Q5SY68 101 aa11.59□□□□□ -0.55
TTC3-209ENST00000438055 SMIM9A6NGZ8 99 aa11.59□□□□□ -0.55
TTC3-209ENST00000438055 PDZD2O15018 2839 aa11.58□□□□□ -0.56
TTC3-209ENST00000438055 LINC00643Q86TS7 51 aa11.58□□□□□ -0.56
TTC3-209ENST00000438055 Q8IZM0 81 aa11.58□□□□□ -0.56
TTC3-209ENST00000438055 A0A1B0GUV1 79 aa11.57□□□□□ -0.56
TTC3-209ENST00000438055 LYRM9A8MSI8 78 aa11.57□□□□□ -0.56
TTC3-209ENST00000438055 KLK12Q9UKR0 248 aa11.56□□□□□ -0.56
TTC3-209ENST00000438055 SMCR5Q8TEV8 140 aa11.56□□□□□ -0.56
TTC3-209ENST00000438055 CD164L2Q6UWJ8 174 aa11.56□□□□□ -0.56
TTC3-209ENST00000438055 ORMDL1Q9P0S3 153 aa11.56□□□□□ -0.56
TTC3-209ENST00000438055 IGKV3D-7A0A0C4DH55 119 aa11.55□□□□□ -0.56
TTC3-209ENST00000438055 CELA1Q9UNI1 258 aa11.55□□□□□ -0.56
TTC3-209ENST00000438055 C9orf129Q5T035 196 aaKnown RBP11.54□□□□□ -0.56
TTC3-209ENST00000438055 SPART-AS1P0CW21 52 aa11.53□□□□□ -0.56
TTC3-209ENST00000438055 SPAG11BQ08648 103 aa11.53□□□□□ -0.56
TTC3-209ENST00000438055 SDIM1Q6ZPB5 146 aa11.52□□□□□ -0.56
TTC3-209ENST00000438055 TEP1Q99973 2627 aaKnown RBP11.52□□□□□ -0.57
TTC3-209ENST00000438055 C6orf223Q8N319 242 aa11.52□□□□□ -0.57
TTC3-209ENST00000438055 FLNBO75369 2602 aaKnown RBP11.51□□□□□ -0.57
TTC3-209ENST00000438055 LINC00612Q8N6U2 182 aa11.51□□□□□ -0.57
TTC3-209ENST00000438055 UNQ6190/PRO20217Q6UXQ8 127 aa11.5□□□□□ -0.57
TTC3-209ENST00000438055 TMEM126AQ9H061 195 aa11.5□□□□□ -0.57
TTC3-209ENST00000438055 TRBV7-7A0A0K0K1E9 115 aa11.5□□□□□ -0.57
TTC3-209ENST00000438055 C6orf99Q4VX62 202 aa11.5□□□□□ -0.57
TTC3-209ENST00000438055 C22orf24Q9Y442 160 aa11.49□□□□□ -0.57
TTC3-209ENST00000438055 CXCL5P42830 114 aa11.48□□□□□ -0.57
TTC3-209ENST00000438055 TENM1Q9UKZ4 2725 aa11.48□□□□□ -0.57
TTC3-209ENST00000438055 RPL18AQ02543 176 aaKnown RBP11.48□□□□□ -0.57
TTC3-209ENST00000438055 HIST1H4AP62805 103 aaKnown RBP11.47□□□□□ -0.57
TTC3-209ENST00000438055 NSD1Q96L73 2696 aaPredicted RBP11.47□□□□□ -0.57
TTC3-209ENST00000438055 PPDPFQ9H3Y8 114 aa11.47□□□□□ -0.57
TTC3-209ENST00000438055 C10orf25Q5T742 122 aa11.46□□□□□ -0.57
TTC3-209ENST00000438055 XAGE1AQ9HD64 81 aa11.46□□□□□ -0.58
TTC3-209ENST00000438055 IGHV4-30-4P0DP06 118 aa11.46□□□□□ -0.58
TTC3-209ENST00000438055 C9orf153Q5TBE3 101 aa11.46□□□□□ -0.58
TTC3-209ENST00000438055 LAMTOR3Q9UHA4 124 aa11.46□□□□□ -0.58
TTC3-209ENST00000438055 MIFP14174 115 aa11.45□□□□□ -0.58
TTC3-209ENST00000438055 IMUPQ9GZP8 106 aa11.45□□□□□ -0.58
TTC3-209ENST00000438055 LINC00846Q9NV44 126 aa11.45□□□□□ -0.58
TTC3-209ENST00000438055 CYSRT1A8MQ03 144 aa11.45□□□□□ -0.58
TTC3-209ENST00000438055 KIAA0087Q14695 138 aa11.45□□□□□ -0.58
TTC3-209ENST00000438055 F8P00451 2351 aa11.45□□□□□ -0.58
TTC3-209ENST00000438055 OTOGQ6ZRI0 2925 aa11.43□□□□□ -0.58
TTC3-209ENST00000438055 KLK5Q9Y337 293 aaPredicted RBP11.43□□□□□ -0.58
TTC3-209ENST00000438055 HIGD2BQ4VC39 106 aa11.43□□□□□ -0.58
TTC3-209ENST00000438055 Q8N814 137 aa11.43□□□□□ -0.58
TTC3-209ENST00000438055 LELP1Q5T871 98 aa11.42□□□□□ -0.58
TTC3-209ENST00000438055 ANK3Q12955 4377 aaKnown RBP11.42□□□□□ -0.58
TTC3-209ENST00000438055 Q8NAQ8 132 aa11.42□□□□□ -0.58
TTC3-209ENST00000438055 COX17Q14061 63 aa11.42□□□□□ -0.58
TTC3-209ENST00000438055 A0A087WVE0 104 aa11.41□□□□□ -0.58
TTC3-209ENST00000438055 RETNQ9HD89 108 aa11.41□□□□□ -0.58
TTC3-209ENST00000438055 ZNF561-AS1K7EIQ3 104 aa11.41□□□□□ -0.58
TTC3-209ENST00000438055 SMIM20Q8N5G0 67 aa11.41□□□□□ -0.58
TTC3-209ENST00000438055 HIVEP1P15822 2718 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms