RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 H3BQ85 93 aa5.38□□□□□ -1.55
CPSF6-202ENST00000435070 LINC00337Q8N6G1 96 aa5.38□□□□□ -1.55
CPSF6-202ENST00000435070 HRNRQ86YZ3 2850 aaPredicted RBP5.38□□□□□ -1.55
CPSF6-202ENST00000435070 LRCOL1A6NCL2 159 aa5.38□□□□□ -1.55
CPSF6-202ENST00000435070 ENHOQ6UWT2 76 aa5.38□□□□□ -1.55
CPSF6-202ENST00000435070 TMEM254Q8TBM7 123 aa5.38□□□□□ -1.55
CPSF6-202ENST00000435070 Q6JHZ5 121 aa5.38□□□□□ -1.55
CPSF6-202ENST00000435070 MIR7-3HGQ8N6C7 128 aa5.38□□□□□ -1.55
CPSF6-202ENST00000435070 BLCAPP62952 87 aa5.38□□□□□ -1.55
CPSF6-202ENST00000435070 PTPN13Q12923 2485 aa5.37□□□□□ -1.55
CPSF6-202ENST00000435070 USP9YO00507 2555 aaPredicted RBP5.37□□□□□ -1.55
CPSF6-202ENST00000435070 SMIM11BQ8TCY0 68 aa5.37□□□□□ -1.55
CPSF6-202ENST00000435070 SNURFQ9Y675 71 aa5.37□□□□□ -1.55
CPSF6-202ENST00000435070 LINC00242Q5T6M2 205 aa5.37□□□□□ -1.55
CPSF6-202ENST00000435070 C16orf74Q96GX8 76 aa5.37□□□□□ -1.55
CPSF6-202ENST00000435070 SND1-IT1Q9HBX3 110 aa5.37□□□□□ -1.55
CPSF6-202ENST00000435070 K7EQD1 137 aa5.37□□□□□ -1.55
CPSF6-202ENST00000435070 SPAG11BQ08648 103 aa5.37□□□□□ -1.55
CPSF6-202ENST00000435070 PRORYQ9H606 182 aa5.37□□□□□ -1.55
CPSF6-202ENST00000435070 SPART-AS1P0CW21 52 aa5.36□□□□□ -1.55
CPSF6-202ENST00000435070 FN1P02751 2386 aaKnown RBP5.36□□□□□ -1.55
CPSF6-202ENST00000435070 SMIM1B2RUZ4 78 aa5.36□□□□□ -1.55
CPSF6-202ENST00000435070 IGFL3Q6UXB1 125 aa5.36□□□□□ -1.55
CPSF6-202ENST00000435070 IGF2RP11717 2491 aa5.35□□□□□ -1.55
CPSF6-202ENST00000435070 TLN2Q9Y4G6 2542 aa5.35□□□□□ -1.55
CPSF6-202ENST00000435070 PLA2G2CQ5R387 149 aa5.35□□□□□ -1.55
CPSF6-202ENST00000435070 IGHV4-30-4P0DP06 118 aa5.34□□□□□ -1.55
CPSF6-202ENST00000435070 IGHV4-31P0DP07 118 aa5.34□□□□□ -1.55
CPSF6-202ENST00000435070 IGKV2-28A0A075B6P5 120 aa5.34□□□□□ -1.55
CPSF6-202ENST00000435070 IGKV2D-28P01615 120 aa5.34□□□□□ -1.55
CPSF6-202ENST00000435070 PDE6GP18545 87 aa5.34□□□□□ -1.55
CPSF6-202ENST00000435070 C10orf99Q6UWK7 81 aa5.34□□□□□ -1.55
CPSF6-202ENST00000435070 WFDC10BQ8IUB3 73 aa5.34□□□□□ -1.55
CPSF6-202ENST00000435070 PRO0628Q9UI54 55 aa5.34□□□□□ -1.55
CPSF6-202ENST00000435070 PSPHP1O15172 72 aa5.34□□□□□ -1.55
CPSF6-202ENST00000435070 CRYBG3Q68DQ2 2970 aa5.34□□□□□ -1.56
CPSF6-202ENST00000435070 CDSNQ15517 529 aa5.34□□□□□ -1.56
CPSF6-202ENST00000435070 DEFB135Q30KP9 77 aa5.33□□□□□ -1.56
CPSF6-202ENST00000435070 USP9XQ93008 2570 aaPredicted RBP5.33□□□□□ -1.56
CPSF6-202ENST00000435070 IGLV5-39A0A0G2JS06 123 aa5.33□□□□□ -1.56
CPSF6-202ENST00000435070 FAM19A3Q7Z5A8 133 aa5.33□□□□□ -1.56
CPSF6-202ENST00000435070 LINC00474Q9P2X8 69 aa5.33□□□□□ -1.56
CPSF6-202ENST00000435070 SCXQ7RTU7 201 aa5.33□□□□□ -1.56
CPSF6-202ENST00000435070 WFDC10AQ9H1F0 79 aa5.33□□□□□ -1.56
CPSF6-202ENST00000435070 H3BUA1 57 aa5.33□□□□□ -1.56
CPSF6-202ENST00000435070 Q6ZTI0 123 aa5.33□□□□□ -1.56
CPSF6-202ENST00000435070 B9D2Q9BPU9 175 aa5.32□□□□□ -1.56
CPSF6-202ENST00000435070 HIVEP3Q5T1R4 2406 aa5.32□□□□□ -1.56
CPSF6-202ENST00000435070 TMEM256-PLSCR3K7ERE1 68 aa5.32□□□□□ -1.56
CPSF6-202ENST00000435070 Q8NA96 180 aa5.32□□□□□ -1.56
CPSF6-202ENST00000435070 ZNF706Q9Y5V0 76 aaPredicted RBP5.32□□□□□ -1.56
CPSF6-202ENST00000435070 PRYO14603 147 aa5.32□□□□□ -1.56
CPSF6-202ENST00000435070 CSMD2Q7Z408 3487 aa5.31□□□□□ -1.56
CPSF6-202ENST00000435070 IGLV5-45A0A087WSX0 123 aa5.31□□□□□ -1.56
CPSF6-202ENST00000435070 PRR3P79522 188 aaKnown RBP5.31□□□□□ -1.56
CPSF6-202ENST00000435070 CXCL6P80162 114 aa5.31□□□□□ -1.56
CPSF6-202ENST00000435070 SPAG11AQ6PDA7 123 aa5.31□□□□□ -1.56
CPSF6-202ENST00000435070 MDFIQ99750 246 aa5.31□□□□□ -1.56
CPSF6-202ENST00000435070 KLK9Q2XQG4 91 aa5.3□□□□□ -1.56
CPSF6-202ENST00000435070 C11orf72Q8NBR9 251 aa5.3□□□□□ -1.56
CPSF6-202ENST00000435070 C4orf3Q8WVX3 66 aa5.3□□□□□ -1.56
CPSF6-202ENST00000435070 IGKV2-24A0A0C4DH68 120 aa5.3□□□□□ -1.56
CPSF6-202ENST00000435070 K7EQG2 157 aa5.3□□□□□ -1.56
CPSF6-202ENST00000435070 CCKP06307 115 aa5.3□□□□□ -1.56
CPSF6-202ENST00000435070 ATP5EP2Q5VTU8 51 aa5.3□□□□□ -1.56
CPSF6-202ENST00000435070 H7BZZ5 65 aa5.3□□□□□ -1.56
CPSF6-202ENST00000435070 ZFYVE26Q68DK2 2539 aa5.3□□□□□ -1.56
CPSF6-202ENST00000435070 IL17DQ8TAD2 202 aa5.29□□□□□ -1.56
CPSF6-202ENST00000435070 ABCA2Q9BZC7 2435 aa5.29□□□□□ -1.56
CPSF6-202ENST00000435070 TRAV10A0A0B4J240 114 aa5.29□□□□□ -1.56
CPSF6-202ENST00000435070 A0A1W2PPR1 153 aa5.29□□□□□ -1.56
CPSF6-202ENST00000435070 FP248Q71RG6 208 aaPredicted RBP5.29□□□□□ -1.56
CPSF6-202ENST00000435070 C11orf45Q8TAV5 145 aa5.29□□□□□ -1.56
CPSF6-202ENST00000435070 ITPR1Q14643 2758 aa5.29□□□□□ -1.56
CPSF6-202ENST00000435070 C1orf158Q8N1D5 194 aa5.29□□□□□ -1.56
CPSF6-202ENST00000435070 C19orf84I3L1E1 186 aa5.28□□□□□ -1.56
CPSF6-202ENST00000435070 AVPP01185 164 aa5.28□□□□□ -1.56
CPSF6-202ENST00000435070 LYPD5Q6UWN5 251 aa5.28□□□□□ -1.56
CPSF6-202ENST00000435070 KLK12Q9UKR0 248 aa5.28□□□□□ -1.56
CPSF6-202ENST00000435070 NTM-AS1Q6ZSK4 140 aa5.28□□□□□ -1.56
CPSF6-202ENST00000435070 DIRC1Q969H9 104 aa5.28□□□□□ -1.56
CPSF6-202ENST00000435070 NCOR2Q9Y618 2525 aa5.28□□□□□ -1.56
CPSF6-202ENST00000435070 POLQO75417 2590 aa5.28□□□□□ -1.56
CPSF6-202ENST00000435070 LMO4P61968 165 aa5.28□□□□□ -1.56
CPSF6-202ENST00000435070 BSNQ9UPA5 3926 aa5.27□□□□□ -1.57
CPSF6-202ENST00000435070 Q6ZQY7 126 aa5.27□□□□□ -1.57
CPSF6-202ENST00000435070 ADORA2A-AS1P86434 159 aa5.27□□□□□ -1.57
CPSF6-202ENST00000435070 M0R2N4 97 aa5.27□□□□□ -1.57
CPSF6-202ENST00000435070 DNAJC9-AS1A6NH13 148 aa5.27□□□□□ -1.57
CPSF6-202ENST00000435070 OBSCN-AS1Q96MR7 158 aa5.27□□□□□ -1.57
CPSF6-202ENST00000435070 CDC42SE2Q9NRR3 84 aa5.27□□□□□ -1.57
CPSF6-202ENST00000435070 ZNF292O60281 2723 aa5.27□□□□□ -1.57
CPSF6-202ENST00000435070 TRBV7-6A0A0J9YX20 115 aa5.27□□□□□ -1.57
CPSF6-202ENST00000435070 CELA1Q9UNI1 258 aa5.27□□□□□ -1.57
CPSF6-202ENST00000435070 K7EMT4 169 aa5.26□□□□□ -1.57
CPSF6-202ENST00000435070 Q6ZVQ6 151 aa5.26□□□□□ -1.57
CPSF6-202ENST00000435070 X6R8D5 127 aa5.26□□□□□ -1.57
CPSF6-202ENST00000435070 MIFP14174 115 aa5.26□□□□□ -1.57
CPSF6-202ENST00000435070 C11orf71Q6IPW1 123 aa5.26□□□□□ -1.57
CPSF6-202ENST00000435070 A0A096LNI7 61 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms