RNA–Protein interactions for RNA: ENST00000434517.1

TOP3B-205, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-205ENST00000434517 CKS1BP61024 79 aa13.76□□□□□ -0.21
TOP3B-205ENST00000434517 HAMPP81172 84 aa13.76□□□□□ -0.21
TOP3B-205ENST00000434517 ODF1Q14990 250 aa13.75□□□□□ -0.21
TOP3B-205ENST00000434517 UNQ6190/PRO20217Q6UXQ8 127 aa13.75□□□□□ -0.21
TOP3B-205ENST00000434517 XGP55808 180 aa13.74□□□□□ -0.21
TOP3B-205ENST00000434517 C2orf82Q6UX34 121 aa13.74□□□□□ -0.21
TOP3B-205ENST00000434517 COX7B2Q8TF08 81 aa13.74□□□□□ -0.21
TOP3B-205ENST00000434517 RNF151Q2KHN1 245 aa13.73□□□□□ -0.21
TOP3B-205ENST00000434517 C10orf25Q5T742 122 aa13.73□□□□□ -0.21
TOP3B-205ENST00000434517 LOC107984640A0A0U1RRK4 108 aa13.72□□□□□ -0.21
TOP3B-205ENST00000434517 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.72□□□□□ -0.21
TOP3B-205ENST00000434517 IGKV2-24A0A0C4DH68 120 aa13.71□□□□□ -0.21
TOP3B-205ENST00000434517 S100A6P06703 90 aa13.71□□□□□ -0.21
TOP3B-205ENST00000434517 CHTF8P0CG12 524 aa13.71□□□□□ -0.21
TOP3B-205ENST00000434517 DPH3Q96FX2 82 aa13.71□□□□□ -0.21
TOP3B-205ENST00000434517 C6orf48Q9UBA6 75 aa13.71□□□□□ -0.21
TOP3B-205ENST00000434517 PLNP26678 52 aa13.7□□□□□ -0.22
TOP3B-205ENST00000434517 CXCL5P42830 114 aa13.7□□□□□ -0.22
TOP3B-205ENST00000434517 SCXQ7RTU7 201 aa13.7□□□□□ -0.22
TOP3B-205ENST00000434517 A0A096LNI7 61 aa13.69□□□□□ -0.22
TOP3B-205ENST00000434517 TRBV30A0A0K0K1B3 111 aa13.69□□□□□ -0.22
TOP3B-205ENST00000434517 SYS1-DBNDD2H3BUS1 97 aa13.69□□□□□ -0.22
TOP3B-205ENST00000434517 RPL18AQ02543 176 aaKnown RBP13.69□□□□□ -0.22
TOP3B-205ENST00000434517 PMCHL2Q9BQD1 86 aa13.69□□□□□ -0.22
TOP3B-205ENST00000434517 IGLV5-39A0A0G2JS06 123 aa13.68□□□□□ -0.22
TOP3B-205ENST00000434517 PANO1I0J062 215 aa13.68□□□□□ -0.22
TOP3B-205ENST00000434517 DPM2O94777 84 aa13.68□□□□□ -0.22
TOP3B-205ENST00000434517 GAGE2BQ13066 116 aa13.68□□□□□ -0.22
TOP3B-205ENST00000434517 TMEM223A0PJW6 202 aa13.67□□□□□ -0.22
TOP3B-205ENST00000434517 MAJINQ3KP22 176 aa13.67□□□□□ -0.22
TOP3B-205ENST00000434517 SPACA4Q8TDM5 124 aa13.67□□□□□ -0.22
TOP3B-205ENST00000434517 IGKCP01834 107 aa13.66□□□□□ -0.22
TOP3B-205ENST00000434517 CIRBP-AS1Q8TBR5 109 aa13.66□□□□□ -0.22
TOP3B-205ENST00000434517 LINC00474Q9P2X8 69 aa13.66□□□□□ -0.22
TOP3B-205ENST00000434517 S100A2P29034 98 aa13.65□□□□□ -0.22
TOP3B-205ENST00000434517 PTTG1IPP53801 180 aa13.65□□□□□ -0.22
TOP3B-205ENST00000434517 KRTDAPP60985 99 aa13.65□□□□□ -0.22
TOP3B-205ENST00000434517 CIRBPQ14011 172 aaKnown RBP13.65□□□□□ -0.22
TOP3B-205ENST00000434517 C3orf79P0CE67 100 aa13.64□□□□□ -0.23
TOP3B-205ENST00000434517 C9orf116Q5BN46 136 aaPredicted RBP13.64□□□□□ -0.23
TOP3B-205ENST00000434517 PET117Q6UWS5 81 aa13.64□□□□□ -0.23
TOP3B-205ENST00000434517 SMR3BP02814 79 aaPredicted RBP13.63□□□□□ -0.23
TOP3B-205ENST00000434517 TLX1NBP0CAT3 122 aa13.63□□□□□ -0.23
TOP3B-205ENST00000434517 HIST3H2BBQ8N257 126 aa13.63□□□□□ -0.23
TOP3B-205ENST00000434517 DMBT1Q9UGM3 2413 aaPredicted RBP13.61□□□□□ -0.23
TOP3B-205ENST00000434517 A0A087WYN8 130 aa13.61□□□□□ -0.23
TOP3B-205ENST00000434517 HERVK_113P61574 105 aa13.61□□□□□ -0.23
TOP3B-205ENST00000434517 Q6ZRP5 223 aa13.61□□□□□ -0.23
TOP3B-205ENST00000434517 STPG4Q8N801 248 aa13.61□□□□□ -0.23
TOP3B-205ENST00000434517 NDUFC2-KCTD14E9PQ53 114 aa13.6□□□□□ -0.23
TOP3B-205ENST00000434517 GAGE2EQ4V326 116 aa13.6□□□□□ -0.23
TOP3B-205ENST00000434517 LINC01545Q5VT33 79 aa13.6□□□□□ -0.23
TOP3B-205ENST00000434517 GAGE2DQ9UEU5 116 aa13.6□□□□□ -0.23
TOP3B-205ENST00000434517 SNRPEP62304 92 aaKnown RBP13.59□□□□□ -0.23
TOP3B-205ENST00000434517 C20orf202A1L168 122 aa13.58□□□□□ -0.24
TOP3B-205ENST00000434517 SFTA2Q6UW10 78 aa13.58□□□□□ -0.24
TOP3B-205ENST00000434517 HIST1H2BLQ99880 126 aa13.58□□□□□ -0.24
TOP3B-205ENST00000434517 Q8N1X5 172 aa13.57□□□□□ -0.24
TOP3B-205ENST00000434517 PLAC8Q9NZF1 115 aa13.57□□□□□ -0.24
TOP3B-205ENST00000434517 LEPROTO15243 131 aa13.55□□□□□ -0.24
TOP3B-205ENST00000434517 LINC00528Q8N1L1 170 aa13.55□□□□□ -0.24
TOP3B-205ENST00000434517 PLEKHB2Q96CS7 222 aa13.55□□□□□ -0.24
TOP3B-205ENST00000434517 ZNF625Q96I27 306 aaPredicted RBP13.55□□□□□ -0.24
TOP3B-205ENST00000434517 FAM229AH3BQW9 127 aa13.54□□□□□ -0.24
TOP3B-205ENST00000434517 C5orf52A6NGY3 159 aa13.52□□□□□ -0.25
TOP3B-205ENST00000434517 EPM2AB3EWF7 344 aa13.52□□□□□ -0.25
TOP3B-205ENST00000434517 PFN2P35080 140 aa13.52□□□□□ -0.25
TOP3B-205ENST00000434517 Q5VSD8 79 aa13.52□□□□□ -0.25
TOP3B-205ENST00000434517 ERG28Q9UKR5 140 aa13.52□□□□□ -0.25
TOP3B-205ENST00000434517 LGALS3P17931 250 aaKnown RBP13.51□□□□□ -0.25
TOP3B-205ENST00000434517 NDUFA12Q9UI09 145 aa13.51□□□□□ -0.25
TOP3B-205ENST00000434517 A0A1W2PNN7 141 aa13.5□□□□□ -0.25
TOP3B-205ENST00000434517 J3QQQ9 107 aa13.5□□□□□ -0.25
TOP3B-205ENST00000434517 TSPEAR-AS2P59090 65 aa13.5□□□□□ -0.25
TOP3B-205ENST00000434517 XAGE1AQ9HD64 81 aa13.5□□□□□ -0.25
TOP3B-205ENST00000434517 MYMXA0A1B0GTQ4 84 aa13.49□□□□□ -0.25
TOP3B-205ENST00000434517 AKR1D1P51857 326 aa13.49□□□□□ -0.25
TOP3B-205ENST00000434517 HERV-K104P63124 156 aa13.49□□□□□ -0.25
TOP3B-205ENST00000434517 C9orf129Q5T035 196 aaKnown RBP13.49□□□□□ -0.25
TOP3B-205ENST00000434517 FAM168BA1KXE4 195 aa13.48□□□□□ -0.25
TOP3B-205ENST00000434517 E9PLD3 99 aa13.48□□□□□ -0.25
TOP3B-205ENST00000434517 COX17Q14061 63 aa13.48□□□□□ -0.25
TOP3B-205ENST00000434517 FAM19A5Q7Z5A7 132 aaPredicted RBP13.48□□□□□ -0.25
TOP3B-205ENST00000434517 C7orf33Q8WU49 177 aa13.48□□□□□ -0.25
TOP3B-205ENST00000434517 MEIG1Q5JSS6 88 aa13.47□□□□□ -0.25
TOP3B-205ENST00000434517 PLA2G1BP04054 148 aaKnown RBP13.46□□□□□ -0.25
TOP3B-205ENST00000434517 NMUP48645 174 aa13.46□□□□□ -0.25
TOP3B-205ENST00000434517 LINC00158P58513 81 aa13.46□□□□□ -0.25
TOP3B-205ENST00000434517 ATOH7Q8N100 152 aa13.46□□□□□ -0.25
TOP3B-205ENST00000434517 FAT1Q14517 4588 aa13.45□□□□□ -0.26
TOP3B-205ENST00000434517 TMA7Q9Y2S6 64 aaKnown RBP13.45□□□□□ -0.26
TOP3B-205ENST00000434517 A0A0U1RRA0 63 aa13.44□□□□□ -0.26
TOP3B-205ENST00000434517 RPL37AP61513 92 aaKnown RBP13.44□□□□□ -0.26
TOP3B-205ENST00000434517 LINC00587B1AMM8 73 aa13.43□□□□□ -0.26
TOP3B-205ENST00000434517 SMIM13P0DJ93 91 aa13.42□□□□□ -0.26
TOP3B-205ENST00000434517 PHF5AQ7RTV0 110 aaKnown RBP13.42□□□□□ -0.26
TOP3B-205ENST00000434517 M0QXV9 152 aa13.41□□□□□ -0.26
TOP3B-205ENST00000434517 SND1-IT1Q9HBX3 110 aa13.41□□□□□ -0.26
TOP3B-205ENST00000434517 SERTAD4-AS1Q5TG53 156 aa13.4□□□□□ -0.26
TOP3B-205ENST00000434517 IGKV2D-26A0A0A0MRZ7 120 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms