RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 CHTF8P0CG12 524 aa11.69□□□□□ -0.54
HLA-F-220ENST00000434407 PACRGQ96M98 296 aaPredicted RBP11.69□□□□□ -0.54
HLA-F-220ENST00000434407 CAMK2N2Q96S95 79 aa11.69□□□□□ -0.54
HLA-F-220ENST00000434407 A0A0J9YXV3 536 aa11.68□□□□□ -0.54
HLA-F-220ENST00000434407 FAM229AH3BQW9 127 aa11.68□□□□□ -0.54
HLA-F-220ENST00000434407 PMVKQ15126 192 aa11.68□□□□□ -0.54
HLA-F-220ENST00000434407 PMCHL1Q16048 86 aa11.68□□□□□ -0.54
HLA-F-220ENST00000434407 RNF151Q2KHN1 245 aa11.68□□□□□ -0.54
HLA-F-220ENST00000434407 FAM19A2Q8N3H0 131 aa11.68□□□□□ -0.54
HLA-F-220ENST00000434407 PKIGQ9Y2B9 76 aa11.68□□□□□ -0.54
HLA-F-220ENST00000434407 TINCRA0A1B0GVN0 87 aa11.67□□□□□ -0.54
HLA-F-220ENST00000434407 AKR1D1P51857 326 aa11.67□□□□□ -0.54
HLA-F-220ENST00000434407 CDKN2A-AS1Q9UH64 79 aa11.67□□□□□ -0.54
HLA-F-220ENST00000434407 IGLV5-45A0A087WSX0 123 aa11.66□□□□□ -0.54
HLA-F-220ENST00000434407 A0A096LNI7 61 aa11.66□□□□□ -0.54
HLA-F-220ENST00000434407 GEMIN7Q9H840 131 aaKnown RBP11.66□□□□□ -0.54
HLA-F-220ENST00000434407 MRPL35Q9NZE8 188 aaKnown RBP11.66□□□□□ -0.54
HLA-F-220ENST00000434407 A0A087WYN8 130 aa11.65□□□□□ -0.54
HLA-F-220ENST00000434407 PLAC8Q9NZF1 115 aa11.65□□□□□ -0.54
HLA-F-220ENST00000434407 NDUFA1O15239 70 aa11.64□□□□□ -0.55
HLA-F-220ENST00000434407 ATP5LO75964 103 aa11.64□□□□□ -0.55
HLA-F-220ENST00000434407 C10orf25Q5T742 122 aa11.64□□□□□ -0.55
HLA-F-220ENST00000434407 LINC00474Q9P2X8 69 aa11.64□□□□□ -0.55
HLA-F-220ENST00000434407 FLG2Q5D862 2391 aaPredicted RBP11.63□□□□□ -0.55
HLA-F-220ENST00000434407 LOC107984640A0A0U1RRK4 108 aa11.63□□□□□ -0.55
HLA-F-220ENST00000434407 UNQ6190/PRO20217Q6UXQ8 127 aa11.63□□□□□ -0.55
HLA-F-220ENST00000434407 IGKV2-24A0A0C4DH68 120 aa11.62□□□□□ -0.55
HLA-F-220ENST00000434407 PTTG1IPP53801 180 aa11.62□□□□□ -0.55
HLA-F-220ENST00000434407 KRTAP10-4P60372 401 aaPredicted RBP11.62□□□□□ -0.55
HLA-F-220ENST00000434407 MAJINQ3KP22 176 aa11.62□□□□□ -0.55
HLA-F-220ENST00000434407 Q8IZM0 81 aa11.62□□□□□ -0.55
HLA-F-220ENST00000434407 LEPROTL1O95214 131 aa11.61□□□□□ -0.55
HLA-F-220ENST00000434407 PLA2G1BP04054 148 aaKnown RBP11.61□□□□□ -0.55
HLA-F-220ENST00000434407 IGLC3P0DOY3 106 aa11.61□□□□□ -0.55
HLA-F-220ENST00000434407 LINC00469Q8N7U9 141 aa11.61□□□□□ -0.55
HLA-F-220ENST00000434407 DPH3Q96FX2 82 aa11.61□□□□□ -0.55
HLA-F-220ENST00000434407 C6orf48Q9UBA6 75 aa11.61□□□□□ -0.55
HLA-F-220ENST00000434407 SMIM1B2RUZ4 78 aa11.6□□□□□ -0.55
HLA-F-220ENST00000434407 TLX1NBP0CAT3 122 aa11.6□□□□□ -0.55
HLA-F-220ENST00000434407 HSPB8Q9UJY1 196 aa11.6□□□□□ -0.55
HLA-F-220ENST00000434407 TRBV30A0A0K0K1B3 111 aa11.59□□□□□ -0.55
HLA-F-220ENST00000434407 C2orf82Q6UX34 121 aa11.59□□□□□ -0.55
HLA-F-220ENST00000434407 XP32Q5T750 250 aa11.58□□□□□ -0.56
HLA-F-220ENST00000434407 STPG4Q8N801 248 aa11.58□□□□□ -0.56
HLA-F-220ENST00000434407 PRSS2P07478 247 aa11.57□□□□□ -0.56
HLA-F-220ENST00000434407 GAGE2BQ13066 116 aa11.57□□□□□ -0.56
HLA-F-220ENST00000434407 C6orf226Q5I0X4 101 aa11.57□□□□□ -0.56
HLA-F-220ENST00000434407 IFI27L1Q96BM0 104 aa11.57□□□□□ -0.56
HLA-F-220ENST00000434407 TOMM7Q9P0U1 55 aa11.57□□□□□ -0.56
HLA-F-220ENST00000434407 INAFM2P0DMQ5 153 aa11.56□□□□□ -0.56
HLA-F-220ENST00000434407 KRTDAPP60985 99 aa11.56□□□□□ -0.56
HLA-F-220ENST00000434407 MYCBP2O75592 4640 aa11.55□□□□□ -0.56
HLA-F-220ENST00000434407 TRAV12-1A0A0B4J245 112 aa11.55□□□□□ -0.56
HLA-F-220ENST00000434407 ZNF22P17026 224 aaPredicted RBP11.55□□□□□ -0.56
HLA-F-220ENST00000434407 RPL18AQ02543 176 aaKnown RBP11.55□□□□□ -0.56
HLA-F-220ENST00000434407 Q6ZRP5 223 aa11.55□□□□□ -0.56
HLA-F-220ENST00000434407 MAP1LC3CQ9BXW4 147 aa11.55□□□□□ -0.56
HLA-F-220ENST00000434407 PKHD1L1Q86WI1 4243 aa11.54□□□□□ -0.56
HLA-F-220ENST00000434407 H3BRM9 83 aa11.54□□□□□ -0.56
HLA-F-220ENST00000434407 SPINK8P0C7L1 97 aa11.54□□□□□ -0.56
HLA-F-220ENST00000434407 C3orf79P0CE67 100 aa11.54□□□□□ -0.56
HLA-F-220ENST00000434407 CXCL5P42830 114 aa11.54□□□□□ -0.56
HLA-F-220ENST00000434407 CKS1BP61024 79 aa11.54□□□□□ -0.56
HLA-F-220ENST00000434407 JOSD1Q15040 202 aaPredicted RBP11.54□□□□□ -0.56
HLA-F-220ENST00000434407 IGLV5-39A0A0G2JS06 123 aa11.53□□□□□ -0.56
HLA-F-220ENST00000434407 C11orf86A6NJI1 115 aa11.53□□□□□ -0.56
HLA-F-220ENST00000434407 RPL37AP61513 92 aaKnown RBP11.53□□□□□ -0.56
HLA-F-220ENST00000434407 COX7B2Q8TF08 81 aa11.53□□□□□ -0.56
HLA-F-220ENST00000434407 A0A1W2PNN7 141 aa11.52□□□□□ -0.57
HLA-F-220ENST00000434407 NDUFC2-KCTD14E9PQ53 114 aa11.52□□□□□ -0.57
HLA-F-220ENST00000434407 F8VRH5 84 aa11.52□□□□□ -0.57
HLA-F-220ENST00000434407 SCGB1D1O95968 90 aa11.52□□□□□ -0.57
HLA-F-220ENST00000434407 C9orf116Q5BN46 136 aaPredicted RBP11.52□□□□□ -0.57
HLA-F-220ENST00000434407 CHTOPQ9Y3Y2 248 aaKnown RBP11.52□□□□□ -0.57
HLA-F-220ENST00000434407 PYY3Q5JQD4 70 aa11.51□□□□□ -0.57
HLA-F-220ENST00000434407 SYS1-DBNDD2H3BUS1 97 aa11.5□□□□□ -0.57
HLA-F-220ENST00000434407 SMIM6P0DI80 62 aa11.5□□□□□ -0.57
HLA-F-220ENST00000434407 PET117Q6UWS5 81 aa11.5□□□□□ -0.57
HLA-F-220ENST00000434407 C7orf33Q8WU49 177 aa11.49□□□□□ -0.57
HLA-F-220ENST00000434407 C20orf202A1L168 122 aa11.47□□□□□ -0.57
HLA-F-220ENST00000434407 H0Y8G0 127 aa11.47□□□□□ -0.57
HLA-F-220ENST00000434407 ODF1Q14990 250 aa11.47□□□□□ -0.57
HLA-F-220ENST00000434407 GAGE2EQ4V326 116 aa11.47□□□□□ -0.57
HLA-F-220ENST00000434407 LINC00518Q8N0U6 118 aa11.47□□□□□ -0.57
HLA-F-220ENST00000434407 GAGE2DQ9UEU5 116 aa11.47□□□□□ -0.57
HLA-F-220ENST00000434407 TMEM170BQ5T4T1 132 aa11.46□□□□□ -0.57
HLA-F-220ENST00000434407 C9orf129Q5T035 196 aaKnown RBP11.45□□□□□ -0.58
HLA-F-220ENST00000434407 C12orf57Q99622 126 aa11.45□□□□□ -0.58
HLA-F-220ENST00000434407 DMBT1Q9UGM3 2413 aaPredicted RBP11.44□□□□□ -0.58
HLA-F-220ENST00000434407 TMEM223A0PJW6 202 aa11.44□□□□□ -0.58
HLA-F-220ENST00000434407 KRTAP7-1Q8IUC3 87 aa11.44□□□□□ -0.58
HLA-F-220ENST00000434407 FAM168BA1KXE4 195 aa11.43□□□□□ -0.58
HLA-F-220ENST00000434407 HNRNPA3P51991 378 aaKnown RBP11.43□□□□□ -0.58
HLA-F-220ENST00000434407 LINC01545Q5VT33 79 aa11.43□□□□□ -0.58
HLA-F-220ENST00000434407 LRP1Q07954 4544 aaKnown RBP11.42□□□□□ -0.58
HLA-F-220ENST00000434407 PRR3P79522 188 aaKnown RBP11.42□□□□□ -0.58
HLA-F-220ENST00000434407 S100A12P80511 92 aa11.41□□□□□ -0.58
HLA-F-220ENST00000434407 FAT3Q8TDW7 4589 aa11.4□□□□□ -0.58
HLA-F-220ENST00000434407 PHF5AQ7RTV0 110 aaKnown RBP11.4□□□□□ -0.58
HLA-F-220ENST00000434407 ZNF625Q96I27 306 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms