RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 A0A087WZ39 114 aa8.06□□□□□ -1.12
HMGCS1-202ENST00000433297 FN1P02751 2386 aaKnown RBP8.06□□□□□ -1.12
HMGCS1-202ENST00000433297 FBN2P35556 2912 aa8.06□□□□□ -1.12
HMGCS1-202ENST00000433297 A0A096LPF7 62 aa8.05□□□□□ -1.12
HMGCS1-202ENST00000433297 C6orf99Q4VX62 202 aa8.05□□□□□ -1.12
HMGCS1-202ENST00000433297 SPTBN4Q9H254 2564 aa8.05□□□□□ -1.12
HMGCS1-202ENST00000433297 TRBV6-8A0A0A6YYG3 113 aa8.05□□□□□ -1.12
HMGCS1-202ENST00000433297 WFDC10AQ9H1F0 79 aa8.04□□□□□ -1.12
HMGCS1-202ENST00000433297 UTP20O75691 2785 aaKnown RBP8.04□□□□□ -1.12
HMGCS1-202ENST00000433297 LINC00959A0A1B0GUT2 108 aa8.04□□□□□ -1.12
HMGCS1-202ENST00000433297 C9orf116Q5BN46 136 aaPredicted RBP8.04□□□□□ -1.12
HMGCS1-202ENST00000433297 ATP5EP2Q5VTU8 51 aa8.04□□□□□ -1.12
HMGCS1-202ENST00000433297 RMI2Q96E14 147 aa8.04□□□□□ -1.12
HMGCS1-202ENST00000433297 A0A096LNT2 108 aa8.03□□□□□ -1.12
HMGCS1-202ENST00000433297 M0R2N4 97 aa8.03□□□□□ -1.12
HMGCS1-202ENST00000433297 DEFB130BP0DP73 79 aa8.03□□□□□ -1.12
HMGCS1-202ENST00000433297 DEFB130AP0DP74 79 aa8.03□□□□□ -1.12
HMGCS1-202ENST00000433297 TRAV10A0A0B4J240 114 aa8.03□□□□□ -1.12
HMGCS1-202ENST00000433297 PRB1P04280 392 aa8.03□□□□□ -1.12
HMGCS1-202ENST00000433297 RBM3P98179 157 aaKnown RBP8.03□□□□□ -1.12
HMGCS1-202ENST00000433297 LINC01356Q8N9X3 169 aa8.03□□□□□ -1.12
HMGCS1-202ENST00000433297 C1orf43Q9BWL3 253 aa8.03□□□□□ -1.12
HMGCS1-202ENST00000433297 SONP18583 2426 aaKnown RBP8.03□□□□□ -1.12
HMGCS1-202ENST00000433297 NIPBLQ6KC79 2804 aaeCLIP8.02□□□□□ -1.125e-7■■□□□ 13.4
HMGCS1-202ENST00000433297 EPG5Q9HCE0 2579 aa8.02□□□□□ -1.12
HMGCS1-202ENST00000433297 LINC00336Q6ZUF6 198 aa8.02□□□□□ -1.12
HMGCS1-202ENST00000433297 SCXQ7RTU7 201 aa8.02□□□□□ -1.12
HMGCS1-202ENST00000433297 IGLV10-54A0A075B6I4 117 aa8.02□□□□□ -1.13
HMGCS1-202ENST00000433297 NANOS2P60321 138 aaKnown RBP8.02□□□□□ -1.13
HMGCS1-202ENST00000433297 WFDC11Q8NEX6 87 aa8.02□□□□□ -1.13
HMGCS1-202ENST00000433297 NDUFC2-KCTD14E9PQ53 114 aa8.01□□□□□ -1.13
HMGCS1-202ENST00000433297 H7BZZ5 65 aa8.01□□□□□ -1.13
HMGCS1-202ENST00000433297 LY6G6DO95868 133 aa8.01□□□□□ -1.13
HMGCS1-202ENST00000433297 IL17DQ8TAD2 202 aa8.01□□□□□ -1.13
HMGCS1-202ENST00000433297 F8WEM9 126 aa8□□□□□ -1.13
HMGCS1-202ENST00000433297 PKIGQ9Y2B9 76 aa8□□□□□ -1.13
HMGCS1-202ENST00000433297 Q6YL49 198 aa8□□□□□ -1.13
HMGCS1-202ENST00000433297 LINC00269Q8N2A0 174 aa8□□□□□ -1.13
HMGCS1-202ENST00000433297 LINC01547P58512 204 aaPredicted RBP7.99□□□□□ -1.13
HMGCS1-202ENST00000433297 C4orf3Q8WVX3 66 aa7.99□□□□□ -1.13
HMGCS1-202ENST00000433297 SERP1Q9Y6X1 66 aa7.99□□□□□ -1.13
HMGCS1-202ENST00000433297 NAV2Q8IVL1 2488 aa7.99□□□□□ -1.13
HMGCS1-202ENST00000433297 TRAV7A0A075B6U4 112 aa7.99□□□□□ -1.13
HMGCS1-202ENST00000433297 FAM208BQ5VWN6 2430 aa7.98□□□□□ -1.13
HMGCS1-202ENST00000433297 FLNCQ14315 2725 aa7.98□□□□□ -1.13
HMGCS1-202ENST00000433297 Q6ZVQ6 151 aa7.98□□□□□ -1.13
HMGCS1-202ENST00000433297 ZNF843Q8N446 348 aa7.98□□□□□ -1.13
HMGCS1-202ENST00000433297 C16orf74Q96GX8 76 aa7.98□□□□□ -1.13
HMGCS1-202ENST00000433297 ACACBO00763 2458 aa7.97□□□□□ -1.13
HMGCS1-202ENST00000433297 LYPD5Q6UWN5 251 aa7.97□□□□□ -1.13
HMGCS1-202ENST00000433297 ANKRD17O75179 2603 aaKnown RBP7.97□□□□□ -1.13
HMGCS1-202ENST00000433297 Q6ZQT0 140 aa7.97□□□□□ -1.13
HMGCS1-202ENST00000433297 LINC00167Q96N53 147 aa7.97□□□□□ -1.13
HMGCS1-202ENST00000433297 NBEAL2Q6ZNJ1 2754 aa7.97□□□□□ -1.13
HMGCS1-202ENST00000433297 ZFYVE26Q68DK2 2539 aa7.97□□□□□ -1.13
HMGCS1-202ENST00000433297 AKAP9Q99996 3911 aa7.97□□□□□ -1.13
HMGCS1-202ENST00000433297 TRBV10-3A0A0K0K1G6 114 aa7.97□□□□□ -1.13
HMGCS1-202ENST00000433297 MRAPQ8TCY5 172 aa7.97□□□□□ -1.13
HMGCS1-202ENST00000433297 TEX15Q9BXT5 2789 aa7.97□□□□□ -1.13
HMGCS1-202ENST00000433297 GYPEP15421 78 aa7.96□□□□□ -1.13
HMGCS1-202ENST00000433297 Q8IZM0 81 aa7.96□□□□□ -1.13
HMGCS1-202ENST00000433297 SPATA3Q8NHX4 192 aa7.96□□□□□ -1.13
HMGCS1-202ENST00000433297 LINC00474Q9P2X8 69 aa7.96□□□□□ -1.13
HMGCS1-202ENST00000433297 LRRK2Q5S007 2527 aa7.96□□□□□ -1.14
HMGCS1-202ENST00000433297 PLAC8L1A1L4L8 177 aa7.96□□□□□ -1.14
HMGCS1-202ENST00000433297 Q6ZQY7 126 aa7.96□□□□□ -1.14
HMGCS1-202ENST00000433297 Q8N3U1 123 aa7.96□□□□□ -1.14
HMGCS1-202ENST00000433297 NF1P21359 2839 aa7.96□□□□□ -1.14
HMGCS1-202ENST00000433297 NBPF19A0A087WUL8 3843 aa7.95□□□□□ -1.14
HMGCS1-202ENST00000433297 LINC00575Q6W349 94 aa7.95□□□□□ -1.14
HMGCS1-202ENST00000433297 Q8NDZ9 215 aa7.95□□□□□ -1.14
HMGCS1-202ENST00000433297 TM2D3Q9BRN9 247 aa7.95□□□□□ -1.14
HMGCS1-202ENST00000433297 GIG44P09565 113 aaPredicted RBP7.95□□□□□ -1.14
HMGCS1-202ENST00000433297 PRO0628Q9UI54 55 aa7.95□□□□□ -1.14
HMGCS1-202ENST00000433297 MYO18BQ8IUG5 2567 aa7.94□□□□□ -1.14
HMGCS1-202ENST00000433297 ZNF561-AS1K7EIQ3 104 aa7.94□□□□□ -1.14
HMGCS1-202ENST00000433297 ESM1Q9NQ30 184 aa7.94□□□□□ -1.14
HMGCS1-202ENST00000433297 SETXQ7Z333 2677 aaKnown RBP7.93□□□□□ -1.14
HMGCS1-202ENST00000433297 A0A0U1RQV1 116 aa7.93□□□□□ -1.14
HMGCS1-202ENST00000433297 CCL24O00175 119 aa7.93□□□□□ -1.14
HMGCS1-202ENST00000433297 BRK1Q8WUW1 75 aa7.93□□□□□ -1.14
HMGCS1-202ENST00000433297 ANGP03950 147 aaKnown RBP7.93□□□□□ -1.14
HMGCS1-202ENST00000433297 FP248Q71RG6 208 aaPredicted RBP7.93□□□□□ -1.14
HMGCS1-202ENST00000433297 LINC00482Q8N8I6 264 aa7.93□□□□□ -1.14
HMGCS1-202ENST00000433297 MPLKIPQ8TAP9 179 aa7.93□□□□□ -1.14
HMGCS1-202ENST00000433297 SMIM26A0A096LP01 95 aa7.92□□□□□ -1.14
HMGCS1-202ENST00000433297 CACNA1AO00555 2505 aa7.92□□□□□ -1.14
HMGCS1-202ENST00000433297 J3QLI3 93 aa7.92□□□□□ -1.14
HMGCS1-202ENST00000433297 KLKP1Q107X0 134 aa7.92□□□□□ -1.14
HMGCS1-202ENST00000433297 C6orf223Q8N319 242 aa7.92□□□□□ -1.14
HMGCS1-202ENST00000433297 ABCA12Q86UK0 2595 aa7.92□□□□□ -1.14
HMGCS1-202ENST00000433297 TRBV7-6A0A0J9YX20 115 aa7.91□□□□□ -1.14
HMGCS1-202ENST00000433297 CCDC168Q8NDH2 2452 aa7.91□□□□□ -1.14
HMGCS1-202ENST00000433297 Q8N9L7 120 aa7.91□□□□□ -1.14
HMGCS1-202ENST00000433297 CHCHD10Q8WYQ3 142 aaPredicted RBP7.91□□□□□ -1.14
HMGCS1-202ENST00000433297 UNQ6190/PRO20217Q6UXQ8 127 aa7.9□□□□□ -1.14
HMGCS1-202ENST00000433297 LINC01006Q8NI28 216 aa7.9□□□□□ -1.14
HMGCS1-202ENST00000433297 DSCR9P59020 149 aa7.9□□□□□ -1.14
HMGCS1-202ENST00000433297 CFAP46Q8IYW2 2715 aa7.9□□□□□ -1.15
HMGCS1-202ENST00000433297 C10orf25Q5T742 122 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms