RNA–Protein interactions for RNA: ENST00000431374.6

TSPAN9-203, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-203ENST00000431374 ALKBH7Q9BT30 221 aaPredicted RBP9.67□□□□□ -0.86
TSPAN9-203ENST00000431374 C20orf202A1L168 122 aa9.66□□□□□ -0.86
TSPAN9-203ENST00000431374 PMCHL1Q16048 86 aa9.66□□□□□ -0.86
TSPAN9-203ENST00000431374 ZC2HC1BQ5TFG8 222 aa9.66□□□□□ -0.86
TSPAN9-203ENST00000431374 LINC00173Q6ZV60 143 aa9.66□□□□□ -0.86
TSPAN9-203ENST00000431374 VAMP8Q9BV40 100 aa9.66□□□□□ -0.86
TSPAN9-203ENST00000431374 LINC00474Q9P2X8 69 aa9.66□□□□□ -0.86
TSPAN9-203ENST00000431374 A0A087WZ39 114 aa9.65□□□□□ -0.86
TSPAN9-203ENST00000431374 HSBP1O75506 76 aa9.65□□□□□ -0.86
TSPAN9-203ENST00000431374 G0S2P27469 103 aa9.65□□□□□ -0.86
TSPAN9-203ENST00000431374 STPG4Q8N801 248 aa9.65□□□□□ -0.86
TSPAN9-203ENST00000431374 VCX2Q9H322 139 aa9.65□□□□□ -0.86
TSPAN9-203ENST00000431374 LOC107984640A0A0U1RRK4 108 aa9.64□□□□□ -0.87
TSPAN9-203ENST00000431374 PTTG1IPP53801 180 aa9.64□□□□□ -0.87
TSPAN9-203ENST00000431374 TOMM6Q96B49 74 aa9.64□□□□□ -0.87
TSPAN9-203ENST00000431374 TIMM17AQ99595 171 aa9.64□□□□□ -0.87
TSPAN9-203ENST00000431374 LINC01546A6NGU7 62 aa9.63□□□□□ -0.87
TSPAN9-203ENST00000431374 F8WDY8 70 aa9.63□□□□□ -0.87
TSPAN9-203ENST00000431374 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.63□□□□□ -0.87
TSPAN9-203ENST00000431374 M0R143 59 aa9.63□□□□□ -0.87
TSPAN9-203ENST00000431374 HNRNPA3P51991 378 aaKnown RBP9.63□□□□□ -0.87
TSPAN9-203ENST00000431374 MIEN1Q9BRT3 115 aa9.63□□□□□ -0.87
TSPAN9-203ENST00000431374 KRTAP29-1A8MX34 341 aaPredicted RBP9.62□□□□□ -0.87
TSPAN9-203ENST00000431374 GAGE2BQ13066 116 aa9.62□□□□□ -0.87
TSPAN9-203ENST00000431374 RNF151Q2KHN1 245 aa9.62□□□□□ -0.87
TSPAN9-203ENST00000431374 PAPPA-AS1Q5QFB9 102 aa9.62□□□□□ -0.87
TSPAN9-203ENST00000431374 LINC01561Q8N1V8 128 aa9.62□□□□□ -0.87
TSPAN9-203ENST00000431374 LINC00469Q8N7U9 141 aa9.62□□□□□ -0.87
TSPAN9-203ENST00000431374 C7orf33Q8WU49 177 aa9.62□□□□□ -0.87
TSPAN9-203ENST00000431374 MRPL35Q9NZE8 188 aaKnown RBP9.62□□□□□ -0.87
TSPAN9-203ENST00000431374 A0A0J9YXV3 536 aa9.61□□□□□ -0.87
TSPAN9-203ENST00000431374 NDUFA1O15239 70 aa9.61□□□□□ -0.87
TSPAN9-203ENST00000431374 KRTDAPP60985 99 aa9.61□□□□□ -0.87
TSPAN9-203ENST00000431374 KIAA0087Q14695 138 aa9.61□□□□□ -0.87
TSPAN9-203ENST00000431374 FAM19A3Q7Z5A8 133 aa9.61□□□□□ -0.87
TSPAN9-203ENST00000431374 J3QL48 77 aa9.6□□□□□ -0.87
TSPAN9-203ENST00000431374 C10orf25Q5T742 122 aa9.6□□□□□ -0.87
TSPAN9-203ENST00000431374 ERASQ7Z444 233 aa9.6□□□□□ -0.87
TSPAN9-203ENST00000431374 SCGB3A1Q96QR1 104 aa9.6□□□□□ -0.87
TSPAN9-203ENST00000431374 C3orf79P0CE67 100 aa9.59□□□□□ -0.87
TSPAN9-203ENST00000431374 RPL18AQ02543 176 aaKnown RBP9.59□□□□□ -0.87
TSPAN9-203ENST00000431374 UNQ6190/PRO20217Q6UXQ8 127 aa9.59□□□□□ -0.87
TSPAN9-203ENST00000431374 FA2HQ7L5A8 372 aa9.59□□□□□ -0.87
TSPAN9-203ENST00000431374 UQCR10Q9UDW1 63 aa9.59□□□□□ -0.87
TSPAN9-203ENST00000431374 LINC01549A6NIU2 74 aa9.58□□□□□ -0.88
TSPAN9-203ENST00000431374 C6orf48Q9UBA6 75 aa9.58□□□□□ -0.88
TSPAN9-203ENST00000431374 A0A1W2PNN7 141 aa9.57□□□□□ -0.88
TSPAN9-203ENST00000431374 HERVK_113P63121 156 aa9.57□□□□□ -0.88
TSPAN9-203ENST00000431374 SEC11AP67812 179 aa9.57□□□□□ -0.88
TSPAN9-203ENST00000431374 HSPB8Q9UJY1 196 aa9.57□□□□□ -0.88
TSPAN9-203ENST00000431374 OXTP01178 125 aa9.56□□□□□ -0.88
TSPAN9-203ENST00000431374 LINC00614P0C842 121 aa9.56□□□□□ -0.88
TSPAN9-203ENST00000431374 TLX1NBP0CAT3 122 aa9.56□□□□□ -0.88
TSPAN9-203ENST00000431374 PRR3P79522 188 aaKnown RBP9.56□□□□□ -0.88
TSPAN9-203ENST00000431374 HMCN2Q8NDA2 5059 aa9.55□□□□□ -0.88
TSPAN9-203ENST00000431374 SPATA45Q537H7 98 aa9.55□□□□□ -0.88
TSPAN9-203ENST00000431374 C9orf116Q5BN46 136 aaPredicted RBP9.55□□□□□ -0.88
TSPAN9-203ENST00000431374 PET117Q6UWS5 81 aa9.55□□□□□ -0.88
TSPAN9-203ENST00000431374 URB1-AS1Q96HZ7 61 aa9.55□□□□□ -0.88
TSPAN9-203ENST00000431374 GEMIN7Q9H840 131 aaKnown RBP9.55□□□□□ -0.88
TSPAN9-203ENST00000431374 CDKN2A-AS1Q9UH64 79 aa9.55□□□□□ -0.88
TSPAN9-203ENST00000431374 PAM16Q9Y3D7 125 aa9.55□□□□□ -0.88
TSPAN9-203ENST00000431374 C2orf82Q6UX34 121 aa9.54□□□□□ -0.88
TSPAN9-203ENST00000431374 Q6ZRP5 223 aa9.54□□□□□ -0.88
TSPAN9-203ENST00000431374 SNHG12Q9BXW3 62 aa9.54□□□□□ -0.88
TSPAN9-203ENST00000431374 CST9LQ9H4G1 147 aa9.54□□□□□ -0.88
TSPAN9-203ENST00000431374 TNXBP22105 4242 aa9.54□□□□□ -0.88
TSPAN9-203ENST00000431374 TRBV30A0A0K0K1B3 111 aa9.53□□□□□ -0.88
TSPAN9-203ENST00000431374 LEPROTL1O95214 131 aa9.53□□□□□ -0.88
TSPAN9-203ENST00000431374 PRSS2P07478 247 aa9.53□□□□□ -0.88
TSPAN9-203ENST00000431374 IGLC3P0DOY3 106 aa9.53□□□□□ -0.88
TSPAN9-203ENST00000431374 FAM19A2Q8N3H0 131 aa9.53□□□□□ -0.88
TSPAN9-203ENST00000431374 IGLV5-45A0A087WSX0 123 aa9.52□□□□□ -0.89
TSPAN9-203ENST00000431374 A0A096LNJ9 63 aa9.52□□□□□ -0.89
TSPAN9-203ENST00000431374 A0A1B0GV90 55 aa9.52□□□□□ -0.89
TSPAN9-203ENST00000431374 TINCRA0A1B0GVN0 87 aa9.52□□□□□ -0.89
TSPAN9-203ENST00000431374 PMVKQ15126 192 aa9.52□□□□□ -0.89
TSPAN9-203ENST00000431374 Q8IZM0 81 aa9.52□□□□□ -0.89
TSPAN9-203ENST00000431374 MAP1LC3CQ9BXW4 147 aa9.52□□□□□ -0.89
TSPAN9-203ENST00000431374 TOMM7Q9P0U1 55 aa9.52□□□□□ -0.89
TSPAN9-203ENST00000431374 SMIM1B2RUZ4 78 aa9.5□□□□□ -0.89
TSPAN9-203ENST00000431374 SYS1-DBNDD2H3BUS1 97 aa9.5□□□□□ -0.89
TSPAN9-203ENST00000431374 HBDP02042 147 aa9.5□□□□□ -0.89
TSPAN9-203ENST00000431374 CKS1BP61024 79 aa9.5□□□□□ -0.89
TSPAN9-203ENST00000431374 GAGE2EQ4V326 116 aa9.5□□□□□ -0.89
TSPAN9-203ENST00000431374 C6orf226Q5I0X4 101 aa9.5□□□□□ -0.89
TSPAN9-203ENST00000431374 COL5A1-AS1Q5SY13 56 aa9.5□□□□□ -0.89
TSPAN9-203ENST00000431374 GAGE2DQ9UEU5 116 aa9.5□□□□□ -0.89
TSPAN9-203ENST00000431374 HSBP1L1C9JCN9 74 aa9.49□□□□□ -0.89
TSPAN9-203ENST00000431374 NDUFC2-KCTD14E9PQ53 114 aa9.49□□□□□ -0.89
TSPAN9-203ENST00000431374 PHF5AQ7RTV0 110 aaKnown RBP9.49□□□□□ -0.89
TSPAN9-203ENST00000431374 FAM168BA1KXE4 195 aa9.48□□□□□ -0.89
TSPAN9-203ENST00000431374 PMCHL2Q9BQD1 86 aa9.48□□□□□ -0.89
TSPAN9-203ENST00000431374 F8VRH5 84 aa9.46□□□□□ -0.9
TSPAN9-203ENST00000431374 CXCL5P42830 114 aa9.46□□□□□ -0.9
TSPAN9-203ENST00000431374 C9orf129Q5T035 196 aaKnown RBP9.46□□□□□ -0.9
TSPAN9-203ENST00000431374 LINC01545Q5VT33 79 aa9.46□□□□□ -0.9
TSPAN9-203ENST00000431374 FAM19A5Q7Z5A7 132 aaPredicted RBP9.46□□□□□ -0.9
TSPAN9-203ENST00000431374 KRTAP7-1Q8IUC3 87 aa9.46□□□□□ -0.9
TSPAN9-203ENST00000431374 SPINK8P0C7L1 97 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms