RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 TMEM230Q96A57 120 aa2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 UBE2WQ96B02 151 aa2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 ABHD14BQ96IU4 210 aa2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 TRGV9Q99603 122 aa2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 TXNDC17Q9BRA2 123 aa2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 TMEM243Q9BU79 118 aa2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 DPH3P1Q9H4G8 78 aa2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 TP73-AS1Q9UF72 201 aa2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 LRP1BQ9NZR2 4599 aa2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 SRRM2Q9UQ35 2752 aaKnown RBP2.91□□□□□ -1.94
HMGB3P5-201ENST00000428894 TRAV10A0A0B4J240 114 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 LOC107984156A0A0G2JMH3 177 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 FAM223BA6NKX1 122 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 K7ERJ3 54 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 M0R2N4 97 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 TRBV12-3P01733 135 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 CACNG7P62955 275 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 ERCC8Q13216 396 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 ZNF726P1Q15940 193 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 PIGYQ3MUY2 71 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 C1orf134Q5TEV5 83 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 FAM222AQ5U5X8 452 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 ARL17AQ8IVW1 177 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 FAM223AQ8IWN6 122 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 TMEM61Q8N0U2 210 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 TMEM252Q8N6L7 170 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 SERP2Q8N6R1 65 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 OR8A1Q8NGG7 326 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 UBALD1Q8TB05 177 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 FAM3DQ96BQ1 224 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 SLC25A2Q9BXI2 301 aa2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 APOBP04114 4563 aaKnown RBP2.9□□□□□ -1.95
HMGB3P5-201ENST00000428894 DNAH5Q8TE73 4624 aa2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 TMSB15BA0A087X1C1 80 aa2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 PIGBOS1A0A0B4J2F0 54 aa2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 CRYM-AS1A6NIL9 109 aa2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 SLC25A20O43772 301 aa2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 TIMM17BO60830 172 aa2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 NPYP01303 97 aa2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 SAA2P0DJI9 122 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 INAFM2P0DMQ5 153 aa2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 FXYD2P54710 66 aa2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 LINC00315P59091 139 aa2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 KRTAP10-10P60014 251 aa2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 SERF2P84101 59 aa2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 MIC13Q5XKP0 118 aa2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 PDPNQ86YL7 162 aa2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 PCP2Q8IVA1 136 aa2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 ODF3Q96PU9 254 aa2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 LY96Q9Y6Y9 160 aa2.89□□□□□ -1.95
HMGB3P5-201ENST00000428894 CTXND1A0A1B0GTU2 59 aa2.88□□□□□ -1.95
HMGB3P5-201ENST00000428894 INS-IGF2F8WCM5 200 aa2.88□□□□□ -1.95
HMGB3P5-201ENST00000428894 ZNF73O43830 326 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P5-201ENST00000428894 UBE2BP63146 152 aa2.88□□□□□ -1.95
HMGB3P5-201ENST00000428894 LINC00643Q86TS7 51 aa2.88□□□□□ -1.95
HMGB3P5-201ENST00000428894 UBE2DNLQ8IWF7 75 aa2.88□□□□□ -1.95
HMGB3P5-201ENST00000428894 OR5C1Q8NGR4 320 aa2.88□□□□□ -1.95
HMGB3P5-201ENST00000428894 DCANP1Q8TF63 244 aa2.88□□□□□ -1.95
HMGB3P5-201ENST00000428894 FXYD5Q96DB9 178 aa2.88□□□□□ -1.95
HMGB3P5-201ENST00000428894 HIST1H4GQ99525 98 aa2.88□□□□□ -1.95
HMGB3P5-201ENST00000428894 TIMM17AQ99595 171 aa2.88□□□□□ -1.95
HMGB3P5-201ENST00000428894 DEFB131BA0A096LNP1 70 aa2.87□□□□□ -1.95
HMGB3P5-201ENST00000428894 MYMXA0A1B0GTQ4 84 aa2.87□□□□□ -1.95
HMGB3P5-201ENST00000428894 A0A1B0GXF2 115 aa2.87□□□□□ -1.95
HMGB3P5-201ENST00000428894 TMEM256-PLSCR3K7ERE1 68 aa2.87□□□□□ -1.95
HMGB3P5-201ENST00000428894 UPK2O00526 184 aa2.87□□□□□ -1.95
HMGB3P5-201ENST00000428894 IGKV1-16P04430 117 aa2.87□□□□□ -1.95
HMGB3P5-201ENST00000428894 RBMY1A1P0DJD3 496 aaKnown RBP2.87□□□□□ -1.95
HMGB3P5-201ENST00000428894 MIFP14174 115 aa2.87□□□□□ -1.95
HMGB3P5-201ENST00000428894 FCER1GP30273 86 aa2.87□□□□□ -1.95
HMGB3P5-201ENST00000428894 HBBP68871 147 aa2.87□□□□□ -1.95
HMGB3P5-201ENST00000428894 FAM104BQ5XKR9 115 aa2.87□□□□□ -1.95
HMGB3P5-201ENST00000428894 C5orf38Q86SI9 138 aa2.87□□□□□ -1.95
HMGB3P5-201ENST00000428894 TRBV20OR9-2A0A075B6H5 130 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 IGLV2-18A0A075B6J9 118 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 TRAV8-3A0A0A6YYJ7 113 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 TRBV7-1A0A0A6YYK4 115 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 TRBV27A0A0K0K1C4 114 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 J3QRE1 110 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 M0R381 172 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 PPYP01298 95 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 HBDP02042 147 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 APELAP0DMC3 54 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 RNASE2P10153 161 aaKnown RBP2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 CKS2P33552 79 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 RBM3P98179 157 aaKnown RBP2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 ATXN8Q156A1 80 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 RPL39P5Q59GN2 51 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 CLEC19AQ6UXS0 136 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 LCA10Q71F78 164 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 TOMM6Q96B49 74 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 IFI27L1Q96BM0 104 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 PGLYRP4Q96LB8 373 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 TIMM9Q9Y5J7 89 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 UBR4Q5T4S7 5183 aa2.86□□□□□ -1.95
HMGB3P5-201ENST00000428894 C9JCJ5 164 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 DEFB4AO15263 64 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 NDUFC1O43677 76 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 IGLV2-23P01705 113 aa2.85□□□□□ -1.95
HMGB3P5-201ENST00000428894 RBMY1CP0DJD4 496 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms