RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 C6orf226Q5I0X4 101 aa10.78□□□□□ -0.68
LMCD1-204ENST00000426878 Q6ZRP5 223 aa10.78□□□□□ -0.68
LMCD1-204ENST00000426878 A0A1W2PNN7 141 aa10.77□□□□□ -0.68
LMCD1-204ENST00000426878 HNRNPA3P51991 378 aaKnown RBP10.77□□□□□ -0.68
LMCD1-204ENST00000426878 CKS1BP61024 79 aa10.77□□□□□ -0.68
LMCD1-204ENST00000426878 CHCHD1Q96BP2 118 aaKnown RBP10.77□□□□□ -0.68
LMCD1-204ENST00000426878 TOMM7Q9P0U1 55 aa10.77□□□□□ -0.68
LMCD1-204ENST00000426878 LRP1Q07954 4544 aaKnown RBP10.77□□□□□ -0.69
LMCD1-204ENST00000426878 SMIM1B2RUZ4 78 aa10.76□□□□□ -0.69
LMCD1-204ENST00000426878 ATP5LO75964 103 aa10.76□□□□□ -0.69
LMCD1-204ENST00000426878 PMCHL1Q16048 86 aa10.76□□□□□ -0.69
LMCD1-204ENST00000426878 C9orf116Q5BN46 136 aaPredicted RBP10.76□□□□□ -0.69
LMCD1-204ENST00000426878 NDUFC2-KCTD14E9PQ53 114 aa10.75□□□□□ -0.69
LMCD1-204ENST00000426878 FAT3Q8TDW7 4589 aa10.75□□□□□ -0.69
LMCD1-204ENST00000426878 HERC1Q15751 4861 aa10.75□□□□□ -0.69
LMCD1-204ENST00000426878 IGLC3P0DOY3 106 aa10.75□□□□□ -0.69
LMCD1-204ENST00000426878 CXCL5P42830 114 aa10.75□□□□□ -0.69
LMCD1-204ENST00000426878 OXTP01178 125 aa10.74□□□□□ -0.69
LMCD1-204ENST00000426878 PRR3P79522 188 aaKnown RBP10.74□□□□□ -0.69
LMCD1-204ENST00000426878 F8VRH5 84 aa10.73□□□□□ -0.69
LMCD1-204ENST00000426878 TRGC2P03986 189 aa10.73□□□□□ -0.69
LMCD1-204ENST00000426878 COLCA2A8K830 154 aa10.72□□□□□ -0.69
LMCD1-204ENST00000426878 H3BRM9 83 aa10.72□□□□□ -0.69
LMCD1-204ENST00000426878 NDUFA6P56556 154 aa10.72□□□□□ -0.69
LMCD1-204ENST00000426878 COX7B2Q8TF08 81 aa10.72□□□□□ -0.69
LMCD1-204ENST00000426878 J3QL48 77 aa10.71□□□□□ -0.69
LMCD1-204ENST00000426878 GAGE2EQ4V326 116 aa10.71□□□□□ -0.69
LMCD1-204ENST00000426878 GAGE2DQ9UEU5 116 aa10.71□□□□□ -0.69
LMCD1-204ENST00000426878 SPINK8P0C7L1 97 aa10.7□□□□□ -0.7
LMCD1-204ENST00000426878 BAGE3Q86Y29 109 aa10.69□□□□□ -0.7
LMCD1-204ENST00000426878 IGLV5-39A0A0G2JS06 123 aa10.68□□□□□ -0.7
LMCD1-204ENST00000426878 FAM168BA1KXE4 195 aa10.68□□□□□ -0.7
LMCD1-204ENST00000426878 ZNF22P17026 224 aaPredicted RBP10.68□□□□□ -0.7
LMCD1-204ENST00000426878 TRAV12-1A0A0B4J245 112 aa10.67□□□□□ -0.7
LMCD1-204ENST00000426878 HSBP1O75506 76 aa10.67□□□□□ -0.7
LMCD1-204ENST00000426878 C9orf129Q5T035 196 aaKnown RBP10.67□□□□□ -0.7
LMCD1-204ENST00000426878 PHF5AQ7RTV0 110 aaKnown RBP10.67□□□□□ -0.7
LMCD1-204ENST00000426878 KRTAP7-1Q8IUC3 87 aa10.67□□□□□ -0.7
LMCD1-204ENST00000426878 IFI27L1Q96BM0 104 aa10.67□□□□□ -0.7
LMCD1-204ENST00000426878 C11orf86A6NJI1 115 aa10.66□□□□□ -0.7
LMCD1-204ENST00000426878 ODF1Q14990 250 aa10.66□□□□□ -0.7
LMCD1-204ENST00000426878 FAM19A5Q7Z5A7 132 aaPredicted RBP10.65□□□□□ -0.7
LMCD1-204ENST00000426878 FAM19A2Q8N3H0 131 aa10.65□□□□□ -0.7
LMCD1-204ENST00000426878 CHTOPQ9Y3Y2 248 aaKnown RBP10.65□□□□□ -0.7
LMCD1-204ENST00000426878 LINC00310P59036 64 aa10.64□□□□□ -0.71
LMCD1-204ENST00000426878 SRSF9Q13242 221 aaKnown RBP eCLIP10.64□□□□□ -0.71
LMCD1-204ENST00000426878 SPINK6Q6UWN8 80 aa10.64□□□□□ -0.71
LMCD1-204ENST00000426878 PSORS1C2Q9UIG4 136 aa10.64□□□□□ -0.71
LMCD1-204ENST00000426878 SERF1AO75920 110 aa10.63□□□□□ -0.71
LMCD1-204ENST00000426878 M0QXV9 152 aa10.62□□□□□ -0.71
LMCD1-204ENST00000426878 TMEM170BQ5T4T1 132 aa10.62□□□□□ -0.71
LMCD1-204ENST00000426878 XAGE1AQ9HD64 81 aa10.61□□□□□ -0.71
LMCD1-204ENST00000426878 SCO1O75880 301 aa10.59□□□□□ -0.71
LMCD1-204ENST00000426878 LEPROTL1O95214 131 aa10.59□□□□□ -0.71
LMCD1-204ENST00000426878 SFTA2Q6UW10 78 aa10.59□□□□□ -0.71
LMCD1-204ENST00000426878 KRTAP11-1Q8IUC1 163 aa10.59□□□□□ -0.71
LMCD1-204ENST00000426878 NUPR1O60356 82 aa10.58□□□□□ -0.72
LMCD1-204ENST00000426878 SERTAD4-AS1Q5TG53 156 aa10.58□□□□□ -0.72
LMCD1-204ENST00000426878 PLA2G2DQ9UNK4 145 aa10.58□□□□□ -0.72
LMCD1-204ENST00000426878 TMEM223A0PJW6 202 aa10.58□□□□□ -0.72
LMCD1-204ENST00000426878 C1orf137Q5JT78 98 aa10.58□□□□□ -0.72
LMCD1-204ENST00000426878 TP73-AS1Q9UF72 201 aa10.58□□□□□ -0.72
LMCD1-204ENST00000426878 C22orf24Q9Y442 160 aa10.58□□□□□ -0.72
LMCD1-204ENST00000426878 MT1HL1P0DM35 61 aa10.57□□□□□ -0.72
LMCD1-204ENST00000426878 COX17Q14061 63 aa10.57□□□□□ -0.72
LMCD1-204ENST00000426878 HSPB8Q9UJY1 196 aa10.57□□□□□ -0.72
LMCD1-204ENST00000426878 UBE2BP63146 152 aa10.56□□□□□ -0.72
LMCD1-204ENST00000426878 LBHQ53QV2 105 aaPredicted RBP10.56□□□□□ -0.72
LMCD1-204ENST00000426878 ZNF625Q96I27 306 aaPredicted RBP10.56□□□□□ -0.72
LMCD1-204ENST00000426878 TNXBP22105 4242 aa10.55□□□□□ -0.72
LMCD1-204ENST00000426878 REG3GQ6UW15 175 aa10.55□□□□□ -0.72
LMCD1-204ENST00000426878 LINC01600Q96MT4 127 aa10.55□□□□□ -0.72
LMCD1-204ENST00000426878 ERG28Q9UKR5 140 aa10.55□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BKO60814 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 IGLV7-43P04211 117 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BJP06899 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BOP23527 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BBP33778 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BDP58876 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BCP62807 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST2H2BEQ16778 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BHQ93079 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BNQ99877 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 HIST1H2BMQ99879 126 aa10.54□□□□□ -0.72
LMCD1-204ENST00000426878 IGLV5-37A0A075B6J1 123 aa10.53□□□□□ -0.72
LMCD1-204ENST00000426878 PFN2P35080 140 aa10.53□□□□□ -0.72
LMCD1-204ENST00000426878 MRPL55Q7Z7F7 128 aaKnown RBP10.52□□□□□ -0.73
LMCD1-204ENST00000426878 H0Y8G0 127 aa10.51□□□□□ -0.73
LMCD1-204ENST00000426878 FABP4P15090 132 aa10.51□□□□□ -0.73
LMCD1-204ENST00000426878 PLNP26678 52 aa10.5□□□□□ -0.73
LMCD1-204ENST00000426878 DIRC1Q969H9 104 aa10.5□□□□□ -0.73
LMCD1-204ENST00000426878 SND1-IT1Q9HBX3 110 aa10.5□□□□□ -0.73
LMCD1-204ENST00000426878 DPM2O94777 84 aa10.48□□□□□ -0.73
LMCD1-204ENST00000426878 LINC00167Q96N53 147 aa10.48□□□□□ -0.73
LMCD1-204ENST00000426878 MAP1LC3CQ9BXW4 147 aa10.48□□□□□ -0.73
LMCD1-204ENST00000426878 KRTAP10-8P60410 259 aa10.47□□□□□ -0.73
LMCD1-204ENST00000426878 HERV-K104P63124 156 aa10.47□□□□□ -0.73
LMCD1-204ENST00000426878 NKAPP1Q8N9T2 125 aa10.47□□□□□ -0.73
LMCD1-204ENST00000426878 H0Y9J4 135 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms