RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 CYSLTR1Q9Y271 337 aa10.75□□□□□ -0.69
GPC1-203ENST00000425056 LOC389332A0A1B0GUA5 103 aa10.74□□□□□ -0.69
GPC1-203ENST00000425056 C2orf66Q6UXQ4 117 aa10.74□□□□□ -0.69
GPC1-203ENST00000425056 PRR26Q8N8Z3 221 aa10.74□□□□□ -0.69
GPC1-203ENST00000425056 ALKBH7Q9BT30 221 aaPredicted RBP10.74□□□□□ -0.69
GPC1-203ENST00000425056 Q6ZN92 141 aa10.73□□□□□ -0.69
GPC1-203ENST00000425056 Q8N8P6 123 aa10.73□□□□□ -0.69
GPC1-203ENST00000425056 PACRGQ96M98 296 aaPredicted RBP10.73□□□□□ -0.69
GPC1-203ENST00000425056 AMELXQ99217 191 aa10.73□□□□□ -0.69
GPC1-203ENST00000425056 NPSP0C0P6 89 aa10.72□□□□□ -0.69
GPC1-203ENST00000425056 C9orf129Q5T035 196 aaKnown RBP10.72□□□□□ -0.69
GPC1-203ENST00000425056 K7EMI3 77 aa10.71□□□□□ -0.69
GPC1-203ENST00000425056 TRGC2P03986 189 aa10.71□□□□□ -0.69
GPC1-203ENST00000425056 UBE2BP63146 152 aa10.71□□□□□ -0.69
GPC1-203ENST00000425056 ORMDL2Q53FV1 153 aa10.71□□□□□ -0.69
GPC1-203ENST00000425056 ZC2HC1BQ5TFG8 222 aa10.71□□□□□ -0.69
GPC1-203ENST00000425056 KRTAP1-4P0C5Y4 121 aa10.7□□□□□ -0.7
GPC1-203ENST00000425056 FAM19A3Q7Z5A8 133 aa10.7□□□□□ -0.7
GPC1-203ENST00000425056 VCX2Q9H322 139 aa10.7□□□□□ -0.7
GPC1-203ENST00000425056 NXT2Q9NPJ8 142 aaKnown RBP10.7□□□□□ -0.7
GPC1-203ENST00000425056 IGLV1-50A0A075B6I6 118 aa10.69□□□□□ -0.7
GPC1-203ENST00000425056 IGIPA6NJ69 53 aa10.69□□□□□ -0.7
GPC1-203ENST00000425056 PRSS2P07478 247 aa10.68□□□□□ -0.7
GPC1-203ENST00000425056 Q8IZM0 81 aa10.68□□□□□ -0.7
GPC1-203ENST00000425056 LPAP08519 4548 aa10.68□□□□□ -0.7
GPC1-203ENST00000425056 C18orf32Q8TCD1 76 aa10.67□□□□□ -0.7
GPC1-203ENST00000425056 TOMM7Q9P0U1 55 aa10.67□□□□□ -0.7
GPC1-203ENST00000425056 CKS1BP61024 79 aa10.66□□□□□ -0.7
GPC1-203ENST00000425056 HERVK_113P63121 156 aa10.65□□□□□ -0.7
GPC1-203ENST00000425056 SEC11AP67812 179 aa10.65□□□□□ -0.7
GPC1-203ENST00000425056 PAPPA-AS1Q5QFB9 102 aa10.65□□□□□ -0.7
GPC1-203ENST00000425056 TIMM17AQ99595 171 aa10.65□□□□□ -0.7
GPC1-203ENST00000425056 RAB5BP61020 215 aa10.64□□□□□ -0.71
GPC1-203ENST00000425056 C6orf226Q5I0X4 101 aa10.64□□□□□ -0.71
GPC1-203ENST00000425056 FA2HQ7L5A8 372 aa10.64□□□□□ -0.71
GPC1-203ENST00000425056 CDKN2A-AS1Q9UH64 79 aa10.64□□□□□ -0.71
GPC1-203ENST00000425056 G0S2P27469 103 aa10.63□□□□□ -0.71
GPC1-203ENST00000425056 LINC00469Q8N7U9 141 aa10.63□□□□□ -0.71
GPC1-203ENST00000425056 LINC01546A6NGU7 62 aa10.62□□□□□ -0.71
GPC1-203ENST00000425056 F8VRH5 84 aa10.62□□□□□ -0.71
GPC1-203ENST00000425056 RPL13AP40429 203 aaKnown RBP10.62□□□□□ -0.71
GPC1-203ENST00000425056 TOMM6Q96B49 74 aa10.62□□□□□ -0.71
GPC1-203ENST00000425056 C22orf24Q9Y442 160 aa10.62□□□□□ -0.71
GPC1-203ENST00000425056 NUPR1O60356 82 aa10.61□□□□□ -0.71
GPC1-203ENST00000425056 ZNF861PO60384 105 aa10.61□□□□□ -0.71
GPC1-203ENST00000425056 LINC00614P0C842 121 aa10.61□□□□□ -0.71
GPC1-203ENST00000425056 GEMIN7Q9H840 131 aaKnown RBP10.61□□□□□ -0.71
GPC1-203ENST00000425056 XAGE1AQ9HD64 81 aa10.61□□□□□ -0.71
GPC1-203ENST00000425056 CXCL5P42830 114 aa10.6□□□□□ -0.71
GPC1-203ENST00000425056 BAGE3Q86Y29 109 aa10.6□□□□□ -0.71
GPC1-203ENST00000425056 TP73-AS1Q9UF72 201 aa10.6□□□□□ -0.71
GPC1-203ENST00000425056 LINC01549A6NIU2 74 aa10.59□□□□□ -0.71
GPC1-203ENST00000425056 HIST1H2BKO60814 126 aa10.59□□□□□ -0.71
GPC1-203ENST00000425056 HIST1H2BJP06899 126 aa10.59□□□□□ -0.71
GPC1-203ENST00000425056 HIST1H2BOP23527 126 aa10.59□□□□□ -0.71
GPC1-203ENST00000425056 HIST1H2BBP33778 126 aa10.59□□□□□ -0.71
GPC1-203ENST00000425056 HIST1H2BDP58876 126 aa10.59□□□□□ -0.71
GPC1-203ENST00000425056 HIST1H2BCP62807 126 aa10.59□□□□□ -0.71
GPC1-203ENST00000425056 HIST2H2BEQ16778 126 aa10.59□□□□□ -0.71
GPC1-203ENST00000425056 LBHQ53QV2 105 aaPredicted RBP10.59□□□□□ -0.71
GPC1-203ENST00000425056 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.59□□□□□ -0.71
GPC1-203ENST00000425056 ERASQ7Z444 233 aa10.59□□□□□ -0.71
GPC1-203ENST00000425056 HIST1H2BHQ93079 126 aa10.59□□□□□ -0.71
GPC1-203ENST00000425056 CHCHD1Q96BP2 118 aaKnown RBP10.59□□□□□ -0.71
GPC1-203ENST00000425056 HIST1H2BNQ99877 126 aa10.59□□□□□ -0.71
GPC1-203ENST00000425056 HIST1H2BMQ99879 126 aa10.59□□□□□ -0.71
GPC1-203ENST00000425056 SMIM1B2RUZ4 78 aa10.58□□□□□ -0.72
GPC1-203ENST00000425056 URB1-AS1Q96HZ7 61 aa10.57□□□□□ -0.72
GPC1-203ENST00000425056 MRPL55Q7Z7F7 128 aaKnown RBP10.56□□□□□ -0.72
GPC1-203ENST00000425056 SCGB3A1Q96QR1 104 aa10.56□□□□□ -0.72
GPC1-203ENST00000425056 IGLV5-45A0A087WSX0 123 aa10.55□□□□□ -0.72
GPC1-203ENST00000425056 TINCRA0A1B0GVN0 87 aa10.55□□□□□ -0.72
GPC1-203ENST00000425056 HSBP1O75506 76 aa10.55□□□□□ -0.72
GPC1-203ENST00000425056 PDZD11Q5EBL8 140 aa10.55□□□□□ -0.72
GPC1-203ENST00000425056 SERF1AO75920 110 aa10.54□□□□□ -0.72
GPC1-203ENST00000425056 BCE1O60756 84 aa10.53□□□□□ -0.72
GPC1-203ENST00000425056 HBDP02042 147 aa10.53□□□□□ -0.72
GPC1-203ENST00000425056 COX7B2Q8TF08 81 aa10.53□□□□□ -0.72
GPC1-203ENST00000425056 RPL28P46779 137 aaKnown RBP10.52□□□□□ -0.73
GPC1-203ENST00000425056 COA6Q5JTJ3 125 aaKnown RBP10.52□□□□□ -0.73
GPC1-203ENST00000425056 LINC00310P59036 64 aa10.51□□□□□ -0.73
GPC1-203ENST00000425056 PRR4Q16378 134 aa10.51□□□□□ -0.73
GPC1-203ENST00000425056 CST9LQ9H4G1 147 aa10.51□□□□□ -0.73
GPC1-203ENST00000425056 NDUFA6P56556 154 aa10.5□□□□□ -0.73
GPC1-203ENST00000425056 LINC00167Q96N53 147 aa10.5□□□□□ -0.73
GPC1-203ENST00000425056 IGLV5-37A0A075B6J1 123 aa10.49□□□□□ -0.73
GPC1-203ENST00000425056 A0A087X002 238 aa10.49□□□□□ -0.73
GPC1-203ENST00000425056 A0A096LNJ9 63 aa10.49□□□□□ -0.73
GPC1-203ENST00000425056 RPL37AP8A6NKH3 93 aa10.48□□□□□ -0.73
GPC1-203ENST00000425056 SPINK8P0C7L1 97 aa10.48□□□□□ -0.73
GPC1-203ENST00000425056 PMVKQ15126 192 aa10.48□□□□□ -0.73
GPC1-203ENST00000425056 PMCHL1Q16048 86 aa10.48□□□□□ -0.73
GPC1-203ENST00000425056 ATP5LO75964 103 aa10.47□□□□□ -0.73
GPC1-203ENST00000425056 S100A6P06703 90 aa10.47□□□□□ -0.73
GPC1-203ENST00000425056 KRTAP13-1Q8IUC0 172 aa10.46□□□□□ -0.73
GPC1-203ENST00000425056 FAM19A2Q8N3H0 131 aa10.46□□□□□ -0.73
GPC1-203ENST00000425056 GAGE10A6NGK3 116 aa10.45□□□□□ -0.74
GPC1-203ENST00000425056 CRYGAP11844 174 aa10.45□□□□□ -0.74
GPC1-203ENST00000425056 H3BRM9 83 aa10.44□□□□□ -0.74
GPC1-203ENST00000425056 LEPROTL1O95214 131 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms