RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 CAMK2N2Q96S95 79 aa5.98□□□□□ -1.45
PDGFC-202ENST00000422544 MRPL35Q9NZE8 188 aaKnown RBP5.98□□□□□ -1.45
PDGFC-202ENST00000422544 FAM30AQ9NZY2 134 aa5.98□□□□□ -1.45
PDGFC-202ENST00000422544 TOMM7Q9P0U1 55 aa5.98□□□□□ -1.45
PDGFC-202ENST00000422544 H3BRM9 83 aa5.97□□□□□ -1.45
PDGFC-202ENST00000422544 SPINK8P0C7L1 97 aa5.97□□□□□ -1.45
PDGFC-202ENST00000422544 ZNF22P17026 224 aaPredicted RBP5.97□□□□□ -1.45
PDGFC-202ENST00000422544 SDIM1Q6ZPB5 146 aa5.97□□□□□ -1.45
PDGFC-202ENST00000422544 Q6ZRU5 148 aa5.97□□□□□ -1.45
PDGFC-202ENST00000422544 TMEM238LA0A1B0GVL6 79 aa5.96□□□□□ -1.46
PDGFC-202ENST00000422544 SMIM1B2RUZ4 78 aa5.96□□□□□ -1.46
PDGFC-202ENST00000422544 F8VRH5 84 aa5.96□□□□□ -1.46
PDGFC-202ENST00000422544 PRSS2P07478 247 aa5.96□□□□□ -1.46
PDGFC-202ENST00000422544 ODF1Q14990 250 aa5.96□□□□□ -1.46
PDGFC-202ENST00000422544 TMEM170BQ5T4T1 132 aa5.96□□□□□ -1.46
PDGFC-202ENST00000422544 C10orf25Q5T742 122 aa5.96□□□□□ -1.46
PDGFC-202ENST00000422544 UNQ6190/PRO20217Q6UXQ8 127 aa5.96□□□□□ -1.46
PDGFC-202ENST00000422544 MAP1LC3CQ9BXW4 147 aa5.96□□□□□ -1.46
PDGFC-202ENST00000422544 FLG2Q5D862 2391 aaPredicted RBP5.95□□□□□ -1.46
PDGFC-202ENST00000422544 FAT3Q8TDW7 4589 aa5.95□□□□□ -1.46
PDGFC-202ENST00000422544 LRP1Q07954 4544 aaKnown RBP5.95□□□□□ -1.46
PDGFC-202ENST00000422544 NDUFA1O15239 70 aa5.95□□□□□ -1.46
PDGFC-202ENST00000422544 XGP55808 180 aa5.95□□□□□ -1.46
PDGFC-202ENST00000422544 HAMPP81172 84 aa5.95□□□□□ -1.46
PDGFC-202ENST00000422544 C6orf226Q5I0X4 101 aa5.95□□□□□ -1.46
PDGFC-202ENST00000422544 C2orf82Q6UX34 121 aa5.95□□□□□ -1.46
PDGFC-202ENST00000422544 Q8IZM0 81 aa5.95□□□□□ -1.46
PDGFC-202ENST00000422544 PMCHL2Q9BQD1 86 aa5.95□□□□□ -1.46
PDGFC-202ENST00000422544 F8WDY8 70 aa5.94□□□□□ -1.46
PDGFC-202ENST00000422544 SYS1-DBNDD2H3BUS1 97 aa5.94□□□□□ -1.46
PDGFC-202ENST00000422544 PANO1I0J062 215 aa5.94□□□□□ -1.46
PDGFC-202ENST00000422544 CDK2AP2O75956 126 aa5.94□□□□□ -1.46
PDGFC-202ENST00000422544 S100A6P06703 90 aa5.94□□□□□ -1.46
PDGFC-202ENST00000422544 CKS1BP61024 79 aa5.94□□□□□ -1.46
PDGFC-202ENST00000422544 Q6ZSA8 131 aa5.94□□□□□ -1.46
PDGFC-202ENST00000422544 COX7B2Q8TF08 81 aa5.94□□□□□ -1.46
PDGFC-202ENST00000422544 C6orf48Q9UBA6 75 aa5.94□□□□□ -1.46
PDGFC-202ENST00000422544 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.94□□□□□ -1.46
PDGFC-202ENST00000422544 IGLV5-39A0A0G2JS06 123 aa5.93□□□□□ -1.46
PDGFC-202ENST00000422544 CHTF8P0CG12 524 aa5.93□□□□□ -1.46
PDGFC-202ENST00000422544 RNF151Q2KHN1 245 aa5.93□□□□□ -1.46
PDGFC-202ENST00000422544 HIST3H2BBQ8N257 126 aa5.93□□□□□ -1.46
PDGFC-202ENST00000422544 DPH3Q96FX2 82 aa5.93□□□□□ -1.46
PDGFC-202ENST00000422544 IGKV2-24A0A0C4DH68 120 aa5.92□□□□□ -1.46
PDGFC-202ENST00000422544 TMEM223A0PJW6 202 aa5.92□□□□□ -1.46
PDGFC-202ENST00000422544 DPM2O94777 84 aa5.92□□□□□ -1.46
PDGFC-202ENST00000422544 C3orf79P0CE67 100 aa5.92□□□□□ -1.46
PDGFC-202ENST00000422544 PLNP26678 52 aa5.92□□□□□ -1.46
PDGFC-202ENST00000422544 KRTDAPP60985 99 aa5.92□□□□□ -1.46
PDGFC-202ENST00000422544 GAGE2BQ13066 116 aa5.92□□□□□ -1.46
PDGFC-202ENST00000422544 A0A096LNI7 61 aa5.91□□□□□ -1.46
PDGFC-202ENST00000422544 TRBV30A0A0K0K1B3 111 aa5.91□□□□□ -1.46
PDGFC-202ENST00000422544 LOC107984640A0A0U1RRK4 108 aa5.91□□□□□ -1.46
PDGFC-202ENST00000422544 IGKCP01834 107 aa5.91□□□□□ -1.46
PDGFC-202ENST00000422544 S100A2P29034 98 aa5.91□□□□□ -1.46
PDGFC-202ENST00000422544 SNRPEP62304 92 aaKnown RBP5.91□□□□□ -1.46
PDGFC-202ENST00000422544 C9orf116Q5BN46 136 aaPredicted RBP5.91□□□□□ -1.46
PDGFC-202ENST00000422544 PET117Q6UWS5 81 aa5.91□□□□□ -1.46
PDGFC-202ENST00000422544 SCXQ7RTU7 201 aa5.91□□□□□ -1.46
PDGFC-202ENST00000422544 CXCL5P42830 114 aa5.9□□□□□ -1.46
PDGFC-202ENST00000422544 RPL18AQ02543 176 aaKnown RBP5.9□□□□□ -1.46
PDGFC-202ENST00000422544 MAJINQ3KP22 176 aa5.9□□□□□ -1.46
PDGFC-202ENST00000422544 LINC01545Q5VT33 79 aa5.9□□□□□ -1.46
PDGFC-202ENST00000422544 CIRBP-AS1Q8TBR5 109 aa5.9□□□□□ -1.46
PDGFC-202ENST00000422544 SPACA4Q8TDM5 124 aa5.9□□□□□ -1.46
PDGFC-202ENST00000422544 HIST1H2BLQ99880 126 aa5.9□□□□□ -1.46
PDGFC-202ENST00000422544 PKIGQ9Y2B9 76 aa5.9□□□□□ -1.46
PDGFC-202ENST00000422544 C5orf52A6NGY3 159 aa5.89□□□□□ -1.47
PDGFC-202ENST00000422544 SMR3BP02814 79 aaPredicted RBP5.89□□□□□ -1.47
PDGFC-202ENST00000422544 TLX1NBP0CAT3 122 aa5.89□□□□□ -1.47
PDGFC-202ENST00000422544 PTTG1IPP53801 180 aa5.89□□□□□ -1.47
PDGFC-202ENST00000422544 CIRBPQ14011 172 aaKnown RBP5.89□□□□□ -1.47
PDGFC-202ENST00000422544 GAGE2EQ4V326 116 aa5.89□□□□□ -1.47
PDGFC-202ENST00000422544 Q6ZRP5 223 aa5.89□□□□□ -1.47
PDGFC-202ENST00000422544 GAGE2DQ9UEU5 116 aa5.89□□□□□ -1.47
PDGFC-202ENST00000422544 A0A087WYN8 130 aa5.88□□□□□ -1.47
PDGFC-202ENST00000422544 NDUFC2-KCTD14E9PQ53 114 aa5.88□□□□□ -1.47
PDGFC-202ENST00000422544 LINC00474Q9P2X8 69 aa5.88□□□□□ -1.47
PDGFC-202ENST00000422544 PKHD1L1Q86WI1 4243 aa5.87□□□□□ -1.47
PDGFC-202ENST00000422544 C20orf202A1L168 122 aa5.87□□□□□ -1.47
PDGFC-202ENST00000422544 HERVK_113P61574 105 aa5.87□□□□□ -1.47
PDGFC-202ENST00000422544 Q8N1X5 172 aa5.87□□□□□ -1.47
PDGFC-202ENST00000422544 STPG4Q8N801 248 aa5.87□□□□□ -1.47
PDGFC-202ENST00000422544 ZNF625Q96I27 306 aaPredicted RBP5.87□□□□□ -1.47
PDGFC-202ENST00000422544 A0A1W2PNN7 141 aa5.86□□□□□ -1.47
PDGFC-202ENST00000422544 LEPROTO15243 131 aa5.86□□□□□ -1.47
PDGFC-202ENST00000422544 TSPEAR-AS2P59090 65 aa5.86□□□□□ -1.47
PDGFC-202ENST00000422544 PLEKHB2Q96CS7 222 aa5.86□□□□□ -1.47
PDGFC-202ENST00000422544 PLAC8Q9NZF1 115 aa5.86□□□□□ -1.47
PDGFC-202ENST00000422544 TMA7Q9Y2S6 64 aaKnown RBP5.86□□□□□ -1.47
PDGFC-202ENST00000422544 J3QQQ9 107 aa5.85□□□□□ -1.47
PDGFC-202ENST00000422544 PFN2P35080 140 aa5.85□□□□□ -1.47
PDGFC-202ENST00000422544 SFTA2Q6UW10 78 aa5.85□□□□□ -1.47
PDGFC-202ENST00000422544 ATOH7Q8N100 152 aa5.85□□□□□ -1.47
PDGFC-202ENST00000422544 NDUFA12Q9UI09 145 aa5.85□□□□□ -1.47
PDGFC-202ENST00000422544 FAM168BA1KXE4 195 aa5.84□□□□□ -1.47
PDGFC-202ENST00000422544 E9PLD3 99 aa5.84□□□□□ -1.47
PDGFC-202ENST00000422544 LGALS3P17931 250 aaKnown RBP5.84□□□□□ -1.47
PDGFC-202ENST00000422544 C9orf129Q5T035 196 aaKnown RBP5.84□□□□□ -1.47
PDGFC-202ENST00000422544 XAGE1AQ9HD64 81 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms