RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 WFDC2Q14508 124 aa14.12□□□□□ -0.15
ABCF3-202ENST00000421340 LECT2O14960 151 aa14.11□□□□□ -0.15
ABCF3-202ENST00000421340 UQCR10Q9UDW1 63 aa14.11□□□□□ -0.15
ABCF3-202ENST00000421340 A0A087WTM6 91 aa14.1□□□□□ -0.15
ABCF3-202ENST00000421340 LINC00587B1AMM8 73 aa14.1□□□□□ -0.15
ABCF3-202ENST00000421340 RTL8CO15255 209 aa14.1□□□□□ -0.15
ABCF3-202ENST00000421340 C2orf82Q6UX34 121 aa14.1□□□□□ -0.15
ABCF3-202ENST00000421340 CAMK2N2Q96S95 79 aa14.1□□□□□ -0.15
ABCF3-202ENST00000421340 TRBV30A0A0K0K1B3 111 aa14.09□□□□□ -0.15
ABCF3-202ENST00000421340 LINC00526Q96FQ7 95 aa14.09□□□□□ -0.15
ABCF3-202ENST00000421340 A0A0J9YXY3 114 aa14.08□□□□□ -0.16
ABCF3-202ENST00000421340 TSTD3H0UI37 97 aa14.08□□□□□ -0.16
ABCF3-202ENST00000421340 SYCNQ0VAF6 134 aa14.08□□□□□ -0.16
ABCF3-202ENST00000421340 RNF151Q2KHN1 245 aa14.08□□□□□ -0.16
ABCF3-202ENST00000421340 UNQ6190/PRO20217Q6UXQ8 127 aa14.08□□□□□ -0.16
ABCF3-202ENST00000421340 MIEN1Q9BRT3 115 aa14.08□□□□□ -0.16
ABCF3-202ENST00000421340 CNBPP62633 177 aaKnown RBP14.07□□□□□ -0.16
ABCF3-202ENST00000421340 Q8N814 137 aa14.07□□□□□ -0.16
ABCF3-202ENST00000421340 PRO1933Q9H354 126 aa14.07□□□□□ -0.16
ABCF3-202ENST00000421340 TIMM17BO60830 172 aa14.06□□□□□ -0.16
ABCF3-202ENST00000421340 C10orf25Q5T742 122 aa14.06□□□□□ -0.16
ABCF3-202ENST00000421340 SCGB1D4Q6XE38 83 aa14.06□□□□□ -0.16
ABCF3-202ENST00000421340 EREGO14944 169 aa14.05□□□□□ -0.16
ABCF3-202ENST00000421340 SLPIP03973 132 aa14.05□□□□□ -0.16
ABCF3-202ENST00000421340 COX17Q14061 63 aa14.05□□□□□ -0.16
ABCF3-202ENST00000421340 HIGD1BQ9P298 99 aa14.05□□□□□ -0.16
ABCF3-202ENST00000421340 CIRBPQ14011 172 aaKnown RBP14.04□□□□□ -0.16
ABCF3-202ENST00000421340 Q6ZRU5 148 aa14.04□□□□□ -0.16
ABCF3-202ENST00000421340 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.03□□□□□ -0.16
ABCF3-202ENST00000421340 CARD19Q96LW7 228 aa14.03□□□□□ -0.16
ABCF3-202ENST00000421340 C6orf48Q9UBA6 75 aa14.03□□□□□ -0.16
ABCF3-202ENST00000421340 ERG28Q9UKR5 140 aa14.03□□□□□ -0.16
ABCF3-202ENST00000421340 TNP2Q05952 138 aa14.02□□□□□ -0.17
ABCF3-202ENST00000421340 SACSQ9NZJ4 4579 aa14.01□□□□□ -0.17
ABCF3-202ENST00000421340 MEIG1Q5JSS6 88 aa14.01□□□□□ -0.17
ABCF3-202ENST00000421340 LINC00336Q6ZUF6 198 aa14.01□□□□□ -0.17
ABCF3-202ENST00000421340 TMEM238C9JI98 176 aa14□□□□□ -0.17
ABCF3-202ENST00000421340 C2orf91Q6ZV80 131 aa14□□□□□ -0.17
ABCF3-202ENST00000421340 LITAFQ99732 161 aa14□□□□□ -0.17
ABCF3-202ENST00000421340 TP73-AS1Q9UF72 201 aa14□□□□□ -0.17
ABCF3-202ENST00000421340 DNAH2Q9P225 4427 aa13.99□□□□□ -0.17
ABCF3-202ENST00000421340 Q6ZVH6 145 aa13.99□□□□□ -0.17
ABCF3-202ENST00000421340 SPANXB1Q9NS25 103 aaPredicted RBP13.99□□□□□ -0.17
ABCF3-202ENST00000421340 TLX1NBP0CAT3 122 aa13.98□□□□□ -0.17
ABCF3-202ENST00000421340 SMIM13P0DJ93 91 aa13.98□□□□□ -0.17
ABCF3-202ENST00000421340 DNAH10Q8IVF4 4471 aa13.98□□□□□ -0.17
ABCF3-202ENST00000421340 HYDINQ4G0P3 5121 aa13.97□□□□□ -0.17
ABCF3-202ENST00000421340 HNRNPA3P51991 378 aaKnown RBP13.97□□□□□ -0.17
ABCF3-202ENST00000421340 C9orf116Q5BN46 136 aaPredicted RBP13.97□□□□□ -0.17
ABCF3-202ENST00000421340 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.96□□□□□ -0.17
ABCF3-202ENST00000421340 PFN2P35080 140 aa13.96□□□□□ -0.17
ABCF3-202ENST00000421340 LINC00158P58513 81 aa13.96□□□□□ -0.17
ABCF3-202ENST00000421340 ADAMTSL4-AS1Q5T5F5 129 aa13.96□□□□□ -0.17
ABCF3-202ENST00000421340 C9orf163Q8N9P6 203 aa13.96□□□□□ -0.17
ABCF3-202ENST00000421340 SPANXDQ9BXN6 97 aa13.96□□□□□ -0.17
ABCF3-202ENST00000421340 SPANXCQ9NY87 97 aa13.96□□□□□ -0.17
ABCF3-202ENST00000421340 PKIGQ9Y2B9 76 aa13.95□□□□□ -0.18
ABCF3-202ENST00000421340 NDUFC2-KCTD14E9PQ53 114 aa13.94□□□□□ -0.18
ABCF3-202ENST00000421340 PTTG1IPP53801 180 aa13.94□□□□□ -0.18
ABCF3-202ENST00000421340 TAL2Q16559 108 aa13.94□□□□□ -0.18
ABCF3-202ENST00000421340 GCSHP23434 173 aa13.93□□□□□ -0.18
ABCF3-202ENST00000421340 PPDPFQ9H3Y8 114 aa13.93□□□□□ -0.18
ABCF3-202ENST00000421340 IFITM1P13164 125 aa13.92□□□□□ -0.18
ABCF3-202ENST00000421340 DDTP30046 118 aa13.92□□□□□ -0.18
ABCF3-202ENST00000421340 SRSF9Q13242 221 aaKnown RBP eCLIP13.92□□□□□ -0.18
ABCF3-202ENST00000421340 MIR7-3HGQ8N6C7 128 aa13.92□□□□□ -0.18
ABCF3-202ENST00000421340 COPS9Q8WXC6 57 aa13.92□□□□□ -0.18
ABCF3-202ENST00000421340 DNAH17Q9UFH2 4485 aa13.92□□□□□ -0.18
ABCF3-202ENST00000421340 LOC107984156A0A0G2JMH3 177 aa13.91□□□□□ -0.18
ABCF3-202ENST00000421340 A0A0U1RRA0 63 aa13.91□□□□□ -0.18
ABCF3-202ENST00000421340 LOC107984640A0A0U1RRK4 108 aa13.91□□□□□ -0.18
ABCF3-202ENST00000421340 ARL17AQ8IVW1 177 aa13.91□□□□□ -0.18
ABCF3-202ENST00000421340 PGPEP1Q9NXJ5 209 aa13.91□□□□□ -0.18
ABCF3-202ENST00000421340 HIST1H4GQ99525 98 aa13.9□□□□□ -0.18
ABCF3-202ENST00000421340 RYR2Q92736 4967 aa13.9□□□□□ -0.18
ABCF3-202ENST00000421340 HSD52Q0P140 79 aa13.89□□□□□ -0.19
ABCF3-202ENST00000421340 KMT2CQ8NEZ4 4911 aaKnown RBP13.88□□□□□ -0.19
ABCF3-202ENST00000421340 Q6ZRP5 223 aa13.88□□□□□ -0.19
ABCF3-202ENST00000421340 IGLV5-52A0A0A0MRZ9 124 aa13.87□□□□□ -0.19
ABCF3-202ENST00000421340 DAND5Q8N907 189 aa13.87□□□□□ -0.19
ABCF3-202ENST00000421340 LINC00308Q8TCZ7 52 aa13.87□□□□□ -0.19
ABCF3-202ENST00000421340 SND1-IT1Q9HBX3 110 aa13.87□□□□□ -0.19
ABCF3-202ENST00000421340 FRAS1Q86XX4 4008 aa13.87□□□□□ -0.19
ABCF3-202ENST00000421340 CTAG1AP78358 180 aa13.86□□□□□ -0.19
ABCF3-202ENST00000421340 SDIM1Q6ZPB5 146 aa13.86□□□□□ -0.19
ABCF3-202ENST00000421340 MUSTN1Q8IVN3 82 aa13.85□□□□□ -0.19
ABCF3-202ENST00000421340 C16orf90A8MZG2 172 aa13.84□□□□□ -0.19
ABCF3-202ENST00000421340 RPL18AQ02543 176 aaKnown RBP13.84□□□□□ -0.19
ABCF3-202ENST00000421340 CEND1Q8N111 149 aa13.84□□□□□ -0.19
ABCF3-202ENST00000421340 KRTAP10-2P60368 255 aa13.83□□□□□ -0.2
ABCF3-202ENST00000421340 RPL24P83731 157 aaKnown RBP13.82□□□□□ -0.2
ABCF3-202ENST00000421340 GAGE2EQ4V326 116 aa13.82□□□□□ -0.2
ABCF3-202ENST00000421340 SOSTDC1Q6X4U4 206 aa13.82□□□□□ -0.2
ABCF3-202ENST00000421340 GAGE2DQ9UEU5 116 aa13.82□□□□□ -0.2
ABCF3-202ENST00000421340 GAGE2BQ13066 116 aa13.81□□□□□ -0.2
ABCF3-202ENST00000421340 LINC00474Q9P2X8 69 aa13.81□□□□□ -0.2
ABCF3-202ENST00000421340 A0A1B0GVY2 172 aa13.79□□□□□ -0.2
ABCF3-202ENST00000421340 PCP4L1A6NKN8 68 aa13.79□□□□□ -0.2
ABCF3-202ENST00000421340 M0R143 59 aa13.79□□□□□ -0.2
ABCF3-202ENST00000421340 EIF4EBP3O60516 100 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms