RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 FAM168BA1KXE4 195 aa10.16□□□□□ -0.78
LINC00404-201ENST00000418660 CKS1BP61024 79 aa10.16□□□□□ -0.78
LINC00404-201ENST00000418660 LINC01600Q96MT4 127 aa10.16□□□□□ -0.78
LINC00404-201ENST00000418660 SMCO4Q9NRQ5 59 aa10.16□□□□□ -0.78
LINC00404-201ENST00000418660 REG3GQ6UW15 175 aa10.15□□□□□ -0.78
LINC00404-201ENST00000418660 TINCRA0A1B0GVN0 87 aa10.14□□□□□ -0.79
LINC00404-201ENST00000418660 APOC3P02656 99 aa10.14□□□□□ -0.79
LINC00404-201ENST00000418660 FAM19A5Q7Z5A7 132 aaPredicted RBP10.14□□□□□ -0.79
LINC00404-201ENST00000418660 CST9LQ9H4G1 147 aa10.14□□□□□ -0.79
LINC00404-201ENST00000418660 TRAPPC1Q9Y5R8 145 aa10.14□□□□□ -0.79
LINC00404-201ENST00000418660 SNAPINO95295 136 aa10.13□□□□□ -0.79
LINC00404-201ENST00000418660 NDUFA5Q16718 116 aa10.13□□□□□ -0.79
LINC00404-201ENST00000418660 LINC00469Q8N7U9 141 aa10.13□□□□□ -0.79
LINC00404-201ENST00000418660 IGLV5-45A0A087WSX0 123 aa10.12□□□□□ -0.79
LINC00404-201ENST00000418660 PMVKQ15126 192 aa10.12□□□□□ -0.79
LINC00404-201ENST00000418660 C1orf137Q5JT78 98 aa10.12□□□□□ -0.79
LINC00404-201ENST00000418660 KRTAP7-1Q8IUC3 87 aa10.12□□□□□ -0.79
LINC00404-201ENST00000418660 SVBPQ8N300 66 aa10.12□□□□□ -0.79
LINC00404-201ENST00000418660 PLA2G2DQ9UNK4 145 aa10.12□□□□□ -0.79
LINC00404-201ENST00000418660 SMIM1B2RUZ4 78 aa10.11□□□□□ -0.79
LINC00404-201ENST00000418660 F8VRH5 84 aa10.11□□□□□ -0.79
LINC00404-201ENST00000418660 PDZD11Q5EBL8 140 aa10.11□□□□□ -0.79
LINC00404-201ENST00000418660 C9orf129Q5T035 196 aaKnown RBP10.11□□□□□ -0.79
LINC00404-201ENST00000418660 LINC00614P0C842 121 aa10.1□□□□□ -0.79
LINC00404-201ENST00000418660 CXCL5P42830 114 aa10.1□□□□□ -0.79
LINC00404-201ENST00000418660 C18orf32Q8TCD1 76 aa10.1□□□□□ -0.79
LINC00404-201ENST00000418660 M0QXV9 152 aa10.09□□□□□ -0.79
LINC00404-201ENST00000418660 KRTAP11-1Q8IUC1 163 aa10.09□□□□□ -0.79
LINC00404-201ENST00000418660 URB1-AS1Q96HZ7 61 aa10.09□□□□□ -0.79
LINC00404-201ENST00000418660 A0A096LNJ9 63 aa10.08□□□□□ -0.8
LINC00404-201ENST00000418660 IGLV7-43P04211 117 aa10.08□□□□□ -0.8
LINC00404-201ENST00000418660 KRTAP10-8P60410 259 aa10.08□□□□□ -0.8
LINC00404-201ENST00000418660 COX7B2Q8TF08 81 aa10.08□□□□□ -0.8
LINC00404-201ENST00000418660 HBDP02042 147 aa10.06□□□□□ -0.8
LINC00404-201ENST00000418660 SPINK8P0C7L1 97 aa10.06□□□□□ -0.8
LINC00404-201ENST00000418660 RAB5BP61020 215 aa10.06□□□□□ -0.8
LINC00404-201ENST00000418660 UBE2BP63146 152 aa10.06□□□□□ -0.8
LINC00404-201ENST00000418660 H3BRM9 83 aa10.05□□□□□ -0.8
LINC00404-201ENST00000418660 IGLC3P0DOY3 106 aa10.05□□□□□ -0.8
LINC00404-201ENST00000418660 XAGE1AQ9HD64 81 aa10.05□□□□□ -0.8
LINC00404-201ENST00000418660 NDUFA6P56556 154 aa10.04□□□□□ -0.8
LINC00404-201ENST00000418660 DIRC1Q969H9 104 aa10.04□□□□□ -0.8
LINC00404-201ENST00000418660 YPEL4Q96NS1 127 aa10.04□□□□□ -0.8
LINC00404-201ENST00000418660 ODF1Q14990 250 aa10.03□□□□□ -0.8
LINC00404-201ENST00000418660 PMCHL1Q16048 86 aa10.03□□□□□ -0.8
LINC00404-201ENST00000418660 C22orf24Q9Y442 160 aa10.03□□□□□ -0.8
LINC00404-201ENST00000418660 HMCN2Q8NDA2 5059 aa10.02□□□□□ -0.8
LINC00404-201ENST00000418660 ATP5LO75964 103 aa10.02□□□□□ -0.81
LINC00404-201ENST00000418660 LBHQ53QV2 105 aaPredicted RBP10.01□□□□□ -0.81
LINC00404-201ENST00000418660 TNXBP22105 4242 aa10.01□□□□□ -0.81
LINC00404-201ENST00000418660 IGLV5-39A0A0G2JS06 123 aa10□□□□□ -0.81
LINC00404-201ENST00000418660 H0Y9J4 135 aa10□□□□□ -0.81
LINC00404-201ENST00000418660 ZNF22P17026 224 aaPredicted RBP10□□□□□ -0.81
LINC00404-201ENST00000418660 BAGE3Q86Y29 109 aa9.99□□□□□ -0.81
LINC00404-201ENST00000418660 TP73-AS1Q9UF72 201 aa9.99□□□□□ -0.81
LINC00404-201ENST00000418660 CHCHD1Q96BP2 118 aaKnown RBP9.98□□□□□ -0.81
LINC00404-201ENST00000418660 NUPR1O60356 82 aa9.97□□□□□ -0.81
LINC00404-201ENST00000418660 MRPL55Q7Z7F7 128 aaKnown RBP9.97□□□□□ -0.81
LINC00404-201ENST00000418660 C11orf86A6NJI1 115 aa9.96□□□□□ -0.82
LINC00404-201ENST00000418660 CBLN2Q8IUK8 224 aa9.95□□□□□ -0.82
LINC00404-201ENST00000418660 ZNF861PO60384 105 aa9.94□□□□□ -0.82
LINC00404-201ENST00000418660 TMEM170BQ5T4T1 132 aa9.94□□□□□ -0.82
LINC00404-201ENST00000418660 CHTOPQ9Y3Y2 248 aaKnown RBP9.94□□□□□ -0.82
LINC00404-201ENST00000418660 IGLV5-37A0A075B6J1 123 aa9.93□□□□□ -0.82
LINC00404-201ENST00000418660 PRR26Q8N8Z3 221 aa9.93□□□□□ -0.82
LINC00404-201ENST00000418660 IFI27L1Q96BM0 104 aa9.93□□□□□ -0.82
LINC00404-201ENST00000418660 LINC00167Q96N53 147 aa9.93□□□□□ -0.82
LINC00404-201ENST00000418660 TRAV12-1A0A0B4J245 112 aa9.92□□□□□ -0.82
LINC00404-201ENST00000418660 KRTAP1-4P0C5Y4 121 aa9.92□□□□□ -0.82
LINC00404-201ENST00000418660 PFN2P35080 140 aa9.92□□□□□ -0.82
LINC00404-201ENST00000418660 ERG28Q9UKR5 140 aa9.92□□□□□ -0.82
LINC00404-201ENST00000418660 IGLV1-50A0A075B6I6 118 aa9.91□□□□□ -0.82
LINC00404-201ENST00000418660 COX17Q14061 63 aa9.91□□□□□ -0.82
LINC00404-201ENST00000418660 SFTA2Q6UW10 78 aa9.91□□□□□ -0.82
LINC00404-201ENST00000418660 RPL37AP8A6NKH3 93 aa9.9□□□□□ -0.82
LINC00404-201ENST00000418660 BCE1O60756 84 aa9.9□□□□□ -0.82
LINC00404-201ENST00000418660 HSBP1O75506 76 aa9.9□□□□□ -0.82
LINC00404-201ENST00000418660 NKAPP1Q8N9T2 125 aa9.9□□□□□ -0.82
LINC00404-201ENST00000418660 GAGE10A6NGK3 116 aa9.89□□□□□ -0.83
LINC00404-201ENST00000418660 TRGC2P03986 189 aa9.89□□□□□ -0.83
LINC00404-201ENST00000418660 SLC7A5P1Q8MH63 180 aa9.89□□□□□ -0.83
LINC00404-201ENST00000418660 ZNF625Q96I27 306 aaPredicted RBP9.89□□□□□ -0.83
LINC00404-201ENST00000418660 SND1-IT1Q9HBX3 110 aa9.89□□□□□ -0.83
LINC00404-201ENST00000418660 TMEM223A0PJW6 202 aa9.88□□□□□ -0.83
LINC00404-201ENST00000418660 RPL28P46779 137 aaKnown RBP9.88□□□□□ -0.83
LINC00404-201ENST00000418660 FAM19A2Q8N3H0 131 aa9.88□□□□□ -0.83
LINC00404-201ENST00000418660 VPREB1P12018 145 aa9.85□□□□□ -0.83
LINC00404-201ENST00000418660 RPL13AP40429 203 aaKnown RBP9.85□□□□□ -0.83
LINC00404-201ENST00000418660 RPL24P83731 157 aaKnown RBP9.85□□□□□ -0.83
LINC00404-201ENST00000418660 SCO1O75880 301 aa9.84□□□□□ -0.83
LINC00404-201ENST00000418660 IGKV2-28A0A075B6P5 120 aa9.83□□□□□ -0.84
LINC00404-201ENST00000418660 SERF1AO75920 110 aa9.83□□□□□ -0.84
LINC00404-201ENST00000418660 IGKV2D-28P01615 120 aa9.83□□□□□ -0.84
LINC00404-201ENST00000418660 COLCA2A8K830 154 aa9.82□□□□□ -0.84
LINC00404-201ENST00000418660 LEPROTL1O95214 131 aa9.82□□□□□ -0.84
LINC00404-201ENST00000418660 LINC00158P58513 81 aa9.82□□□□□ -0.84
LINC00404-201ENST00000418660 LINC00310P59036 64 aa9.82□□□□□ -0.84
LINC00404-201ENST00000418660 KRTAP13-1Q8IUC0 172 aa9.81□□□□□ -0.84
LINC00404-201ENST00000418660 H0Y8G0 127 aa9.8□□□□□ -0.84
LINC00404-201ENST00000418660 UBE2AP49459 152 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms