RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 C6orf226Q5I0X4 101 aa9.66□□□□□ -0.86
ITGB1-204ENST00000417122 Q8IZM0 81 aa9.66□□□□□ -0.86
ITGB1-204ENST00000417122 NDUFC2-KCTD14E9PQ53 114 aa9.65□□□□□ -0.86
ITGB1-204ENST00000417122 CKS1BP61024 79 aa9.65□□□□□ -0.86
ITGB1-204ENST00000417122 SRSF9Q13242 221 aaKnown RBP eCLIP9.65□□□□□ -0.86
ITGB1-204ENST00000417122 PSORS1C2Q9UIG4 136 aa9.65□□□□□ -0.86
ITGB1-204ENST00000417122 TRAPPC1Q9Y5R8 145 aa9.65□□□□□ -0.86
ITGB1-204ENST00000417122 SNAPINO95295 136 aa9.64□□□□□ -0.87
ITGB1-204ENST00000417122 NDUFA5Q16718 116 aa9.64□□□□□ -0.87
ITGB1-204ENST00000417122 FAM19A5Q7Z5A7 132 aaPredicted RBP9.64□□□□□ -0.87
ITGB1-204ENST00000417122 TINCRA0A1B0GVN0 87 aa9.63□□□□□ -0.87
ITGB1-204ENST00000417122 SVBPQ8N300 66 aa9.63□□□□□ -0.87
ITGB1-204ENST00000417122 LINC00469Q8N7U9 141 aa9.63□□□□□ -0.87
ITGB1-204ENST00000417122 LINC01600Q96MT4 127 aa9.63□□□□□ -0.87
ITGB1-204ENST00000417122 CST9LQ9H4G1 147 aa9.63□□□□□ -0.87
ITGB1-204ENST00000417122 PMVKQ15126 192 aa9.62□□□□□ -0.87
ITGB1-204ENST00000417122 C1orf137Q5JT78 98 aa9.62□□□□□ -0.87
ITGB1-204ENST00000417122 REG3GQ6UW15 175 aa9.62□□□□□ -0.87
ITGB1-204ENST00000417122 C9orf129Q5T035 196 aaKnown RBP9.61□□□□□ -0.87
ITGB1-204ENST00000417122 C18orf32Q8TCD1 76 aa9.61□□□□□ -0.87
ITGB1-204ENST00000417122 IGLV5-45A0A087WSX0 123 aa9.6□□□□□ -0.87
ITGB1-204ENST00000417122 SMIM1B2RUZ4 78 aa9.6□□□□□ -0.87
ITGB1-204ENST00000417122 F8VRH5 84 aa9.6□□□□□ -0.87
ITGB1-204ENST00000417122 LINC00614P0C842 121 aa9.6□□□□□ -0.87
ITGB1-204ENST00000417122 KRTAP7-1Q8IUC3 87 aa9.6□□□□□ -0.87
ITGB1-204ENST00000417122 URB1-AS1Q96HZ7 61 aa9.6□□□□□ -0.87
ITGB1-204ENST00000417122 M0QXV9 152 aa9.59□□□□□ -0.87
ITGB1-204ENST00000417122 CXCL5P42830 114 aa9.59□□□□□ -0.87
ITGB1-204ENST00000417122 PDZD11Q5EBL8 140 aa9.59□□□□□ -0.87
ITGB1-204ENST00000417122 PLA2G2DQ9UNK4 145 aa9.59□□□□□ -0.87
ITGB1-204ENST00000417122 A0A096LNJ9 63 aa9.58□□□□□ -0.88
ITGB1-204ENST00000417122 KRTAP11-1Q8IUC1 163 aa9.58□□□□□ -0.88
ITGB1-204ENST00000417122 COX7B2Q8TF08 81 aa9.58□□□□□ -0.88
ITGB1-204ENST00000417122 HMCN2Q8NDA2 5059 aa9.57□□□□□ -0.88
ITGB1-204ENST00000417122 SPINK8P0C7L1 97 aa9.57□□□□□ -0.88
ITGB1-204ENST00000417122 TNXBP22105 4242 aa9.56□□□□□ -0.88
ITGB1-204ENST00000417122 HBDP02042 147 aa9.56□□□□□ -0.88
ITGB1-204ENST00000417122 IGLV7-43P04211 117 aa9.56□□□□□ -0.88
ITGB1-204ENST00000417122 NDUFA6P56556 154 aa9.56□□□□□ -0.88
ITGB1-204ENST00000417122 UBE2BP63146 152 aa9.56□□□□□ -0.88
ITGB1-204ENST00000417122 PMCHL1Q16048 86 aa9.56□□□□□ -0.88
ITGB1-204ENST00000417122 H3BRM9 83 aa9.55□□□□□ -0.88
ITGB1-204ENST00000417122 RAB5BP61020 215 aa9.55□□□□□ -0.88
ITGB1-204ENST00000417122 XAGE1AQ9HD64 81 aa9.55□□□□□ -0.88
ITGB1-204ENST00000417122 IGLC3P0DOY3 106 aa9.54□□□□□ -0.88
ITGB1-204ENST00000417122 YPEL4Q96NS1 127 aa9.54□□□□□ -0.88
ITGB1-204ENST00000417122 KRTAP10-8P60410 259 aa9.53□□□□□ -0.88
ITGB1-204ENST00000417122 C22orf24Q9Y442 160 aa9.53□□□□□ -0.88
ITGB1-204ENST00000417122 ATP5LO75964 103 aa9.52□□□□□ -0.89
ITGB1-204ENST00000417122 DIRC1Q969H9 104 aa9.52□□□□□ -0.89
ITGB1-204ENST00000417122 ZNF22P17026 224 aaPredicted RBP9.51□□□□□ -0.89
ITGB1-204ENST00000417122 ODF1Q14990 250 aa9.5□□□□□ -0.89
ITGB1-204ENST00000417122 IGLV5-39A0A0G2JS06 123 aa9.49□□□□□ -0.89
ITGB1-204ENST00000417122 H0Y9J4 135 aa9.49□□□□□ -0.89
ITGB1-204ENST00000417122 LBHQ53QV2 105 aaPredicted RBP9.49□□□□□ -0.89
ITGB1-204ENST00000417122 BAGE3Q86Y29 109 aa9.49□□□□□ -0.89
ITGB1-204ENST00000417122 CBLN2Q8IUK8 224 aa9.48□□□□□ -0.89
ITGB1-204ENST00000417122 CHCHD1Q96BP2 118 aaKnown RBP9.48□□□□□ -0.89
ITGB1-204ENST00000417122 TP73-AS1Q9UF72 201 aa9.48□□□□□ -0.89
ITGB1-204ENST00000417122 MRPL55Q7Z7F7 128 aaKnown RBP9.47□□□□□ -0.89
ITGB1-204ENST00000417122 C11orf86A6NJI1 115 aa9.46□□□□□ -0.9
ITGB1-204ENST00000417122 NUPR1O60356 82 aa9.46□□□□□ -0.9
ITGB1-204ENST00000417122 TMEM170BQ5T4T1 132 aa9.46□□□□□ -0.9
ITGB1-204ENST00000417122 CHTOPQ9Y3Y2 248 aaKnown RBP9.45□□□□□ -0.9
ITGB1-204ENST00000417122 PFN2P35080 140 aa9.44□□□□□ -0.9
ITGB1-204ENST00000417122 IFI27L1Q96BM0 104 aa9.44□□□□□ -0.9
ITGB1-204ENST00000417122 ZNF861PO60384 105 aa9.43□□□□□ -0.9
ITGB1-204ENST00000417122 PRR26Q8N8Z3 221 aa9.43□□□□□ -0.9
ITGB1-204ENST00000417122 LINC00167Q96N53 147 aa9.43□□□□□ -0.9
ITGB1-204ENST00000417122 IGLV5-37A0A075B6J1 123 aa9.42□□□□□ -0.9
ITGB1-204ENST00000417122 TRAV12-1A0A0B4J245 112 aa9.42□□□□□ -0.9
ITGB1-204ENST00000417122 HSBP1O75506 76 aa9.42□□□□□ -0.9
ITGB1-204ENST00000417122 TRGC2P03986 189 aa9.42□□□□□ -0.9
ITGB1-204ENST00000417122 SLC7A5P1Q8MH63 180 aa9.42□□□□□ -0.9
ITGB1-204ENST00000417122 ERG28Q9UKR5 140 aa9.42□□□□□ -0.9
ITGB1-204ENST00000417122 RPL37AP8A6NKH3 93 aa9.41□□□□□ -0.9
ITGB1-204ENST00000417122 KRTAP1-4P0C5Y4 121 aa9.41□□□□□ -0.9
ITGB1-204ENST00000417122 COX17Q14061 63 aa9.41□□□□□ -0.9
ITGB1-204ENST00000417122 FAM19A2Q8N3H0 131 aa9.41□□□□□ -0.9
ITGB1-204ENST00000417122 NKAPP1Q8N9T2 125 aa9.41□□□□□ -0.9
ITGB1-204ENST00000417122 ZNF625Q96I27 306 aaPredicted RBP9.41□□□□□ -0.9
ITGB1-204ENST00000417122 KRTAP3-3Q9BYR6 98 aa9.41□□□□□ -0.9
ITGB1-204ENST00000417122 KRTAP3-2Q9BYR7 98 aa9.41□□□□□ -0.9
ITGB1-204ENST00000417122 GAGE10A6NGK3 116 aa9.4□□□□□ -0.9
ITGB1-204ENST00000417122 SFTA2Q6UW10 78 aa9.4□□□□□ -0.9
ITGB1-204ENST00000417122 IGLV1-50A0A075B6I6 118 aa9.39□□□□□ -0.91
ITGB1-204ENST00000417122 TMEM223A0PJW6 202 aa9.39□□□□□ -0.91
ITGB1-204ENST00000417122 BCE1O60756 84 aa9.39□□□□□ -0.91
ITGB1-204ENST00000417122 SND1-IT1Q9HBX3 110 aa9.39□□□□□ -0.91
ITGB1-204ENST00000417122 UBR4Q5T4S7 5183 aa9.37□□□□□ -0.91
ITGB1-204ENST00000417122 RPL28P46779 137 aaKnown RBP9.37□□□□□ -0.91
ITGB1-204ENST00000417122 SCO1O75880 301 aa9.36□□□□□ -0.91
ITGB1-204ENST00000417122 IGKV2-28A0A075B6P5 120 aa9.35□□□□□ -0.91
ITGB1-204ENST00000417122 SERF1AO75920 110 aa9.35□□□□□ -0.91
ITGB1-204ENST00000417122 LEPROTL1O95214 131 aa9.35□□□□□ -0.91
ITGB1-204ENST00000417122 IGKV2D-28P01615 120 aa9.35□□□□□ -0.91
ITGB1-204ENST00000417122 VPREB1P12018 145 aa9.35□□□□□ -0.91
ITGB1-204ENST00000417122 LINC00310P59036 64 aa9.35□□□□□ -0.91
ITGB1-204ENST00000417122 RPL24P83731 157 aaKnown RBP9.35□□□□□ -0.91
ITGB1-204ENST00000417122 COLCA2A8K830 154 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms