RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 EXPH5Q8NEV8 1989 aa8.56□□□□□ -1.04
UBR4-205ENST00000417040 X6R8D5 127 aa8.56□□□□□ -1.04
UBR4-205ENST00000417040 SBSPONQ8IVN8 264 aa8.55□□□□□ -1.04
UBR4-205ENST00000417040 Q9BRP9 147 aa8.54□□□□□ -1.04
UBR4-205ENST00000417040 A0A087WSZ3 146 aa8.54□□□□□ -1.04
UBR4-205ENST00000417040 SMIM29Q86T20 159 aa8.54□□□□□ -1.04
UBR4-205ENST00000417040 Q8N2B8 174 aa8.53□□□□□ -1.04
UBR4-205ENST00000417040 LY6G6CO95867 125 aa8.52□□□□□ -1.05
UBR4-205ENST00000417040 EGFEM1PQ0D2K5 195 aa8.52□□□□□ -1.05
UBR4-205ENST00000417040 FAM218AQ96MZ4 157 aa8.52□□□□□ -1.05
UBR4-205ENST00000417040 COX8CQ7Z4L0 72 aa8.51□□□□□ -1.05
UBR4-205ENST00000417040 MUC7Q8TAX7 377 aa8.51□□□□□ -1.05
UBR4-205ENST00000417040 HCG22E2RYF7 251 aa8.5□□□□□ -1.05
UBR4-205ENST00000417040 TECTAO75443 2155 aa8.49□□□□□ -1.05
UBR4-205ENST00000417040 Q6ZTC4 211 aa8.49□□□□□ -1.05
UBR4-205ENST00000417040 IL17DQ8TAD2 202 aa8.49□□□□□ -1.05
UBR4-205ENST00000417040 PRLHP81277 87 aa8.49□□□□□ -1.05
UBR4-205ENST00000417040 PRO0461Q9UI25 63 aa8.49□□□□□ -1.05
UBR4-205ENST00000417040 KRTAP10-9P60411 292 aa8.48□□□□□ -1.05
UBR4-205ENST00000417040 Q6ZRU5 148 aa8.48□□□□□ -1.05
UBR4-205ENST00000417040 CREBBPQ92793 2442 aa8.48□□□□□ -1.05
UBR4-205ENST00000417040 LINC01556Q5JQF7 62 aa8.47□□□□□ -1.05
UBR4-205ENST00000417040 LINC01546A6NGU7 62 aa8.47□□□□□ -1.05
UBR4-205ENST00000417040 SPATA3Q8NHX4 192 aa8.47□□□□□ -1.05
UBR4-205ENST00000417040 KIAA0087Q14695 138 aa8.46□□□□□ -1.05
UBR4-205ENST00000417040 TET2Q6N021 2002 aaPredicted RBP8.46□□□□□ -1.05
UBR4-205ENST00000417040 KIF25-AS1Q9Y6Z4 181 aa8.46□□□□□ -1.05
UBR4-205ENST00000417040 ZFHX2Q9C0A1 2572 aaPredicted RBP8.46□□□□□ -1.06
UBR4-205ENST00000417040 WNK1Q9H4A3 2382 aa8.46□□□□□ -1.06
UBR4-205ENST00000417040 PRO0628Q9UI54 55 aa8.46□□□□□ -1.06
UBR4-205ENST00000417040 C1orf64Q8NEQ6 169 aa8.45□□□□□ -1.06
UBR4-205ENST00000417040 A0A1W2PPR1 153 aa8.45□□□□□ -1.06
UBR4-205ENST00000417040 SORL1Q92673 2214 aa8.44□□□□□ -1.06
UBR4-205ENST00000417040 CXCL6P80162 114 aa8.44□□□□□ -1.06
UBR4-205ENST00000417040 LYPD5Q6UWN5 251 aa8.44□□□□□ -1.06
UBR4-205ENST00000417040 IGLV1-51P01701 117 aa8.44□□□□□ -1.06
UBR4-205ENST00000417040 LINC00474Q9P2X8 69 aa8.43□□□□□ -1.06
UBR4-205ENST00000417040 NAV3Q8IVL0 2385 aa8.43□□□□□ -1.06
UBR4-205ENST00000417040 AGRNO00468 2067 aa8.42□□□□□ -1.06
UBR4-205ENST00000417040 SPAG11AQ6PDA7 123 aa8.4□□□□□ -1.06
UBR4-205ENST00000417040 ADAMTS20P59510 1910 aa8.4□□□□□ -1.06
UBR4-205ENST00000417040 LINC00315P59091 139 aa8.4□□□□□ -1.06
UBR4-205ENST00000417040 SMCR5Q8TEV8 140 aa8.4□□□□□ -1.06
UBR4-205ENST00000417040 IGLV5-39A0A0G2JS06 123 aa8.4□□□□□ -1.07
UBR4-205ENST00000417040 FSHBP01225 129 aa8.4□□□□□ -1.07
UBR4-205ENST00000417040 A0A1B0GUV1 79 aa8.4□□□□□ -1.07
UBR4-205ENST00000417040 C22orf24Q9Y442 160 aa8.4□□□□□ -1.07
UBR4-205ENST00000417040 IGLV5-52A0A0A0MRZ9 124 aa8.39□□□□□ -1.07
UBR4-205ENST00000417040 PRRC2AP48634 2157 aaKnown RBP8.39□□□□□ -1.07
UBR4-205ENST00000417040 C11orf72Q8NBR9 251 aa8.39□□□□□ -1.07
UBR4-205ENST00000417040 TM2D3Q9BRN9 247 aa8.39□□□□□ -1.07
UBR4-205ENST00000417040 hDV103S1A0JD37 113 aa8.38□□□□□ -1.07
UBR4-205ENST00000417040 IGKV2D-30A0A075B6S6 120 aa8.36□□□□□ -1.07
UBR4-205ENST00000417040 IGKV2-30P06310 120 aa8.36□□□□□ -1.07
UBR4-205ENST00000417040 RPL37AP61513 92 aaKnown RBP8.36□□□□□ -1.07
UBR4-205ENST00000417040 C7orf65Q6ZTY9 151 aa8.36□□□□□ -1.07
UBR4-205ENST00000417040 Q6ZQT0 140 aa8.35□□□□□ -1.07
UBR4-205ENST00000417040 FAM19A4Q96LR4 140 aa8.35□□□□□ -1.07
UBR4-205ENST00000417040 C10orf142B7Z368 130 aa8.34□□□□□ -1.07
UBR4-205ENST00000417040 C2orf48Q96LS8 159 aa8.34□□□□□ -1.07
UBR4-205ENST00000417040 C6orf48Q9UBA6 75 aa8.34□□□□□ -1.07
UBR4-205ENST00000417040 IGLV8-61A0A075B6I0 122 aa8.34□□□□□ -1.07
UBR4-205ENST00000417040 A0A1B0GU69 56 aa8.34□□□□□ -1.08
UBR4-205ENST00000417040 LIMD2Q9BT23 127 aa8.33□□□□□ -1.08
UBR4-205ENST00000417040 IGHV3OR16-9A0A0B4J2B5 98 aa8.33□□□□□ -1.08
UBR4-205ENST00000417040 PTPRBP23467 1997 aa8.33□□□□□ -1.08
UBR4-205ENST00000417040 FHL3Q13643 280 aa8.33□□□□□ -1.08
UBR4-205ENST00000417040 SERTAD4-AS1Q5TG53 156 aa8.33□□□□□ -1.08
UBR4-205ENST00000417040 PTPRQQ9UMZ3 2332 aa8.32□□□□□ -1.08
UBR4-205ENST00000417040 ST20-AS1Q8NBB2 130 aa8.31□□□□□ -1.08
UBR4-205ENST00000417040 LINC01561Q8N1V8 128 aa8.31□□□□□ -1.08
UBR4-205ENST00000417040 FAM208BQ5VWN6 2430 aa8.31□□□□□ -1.08
UBR4-205ENST00000417040 LINC00167Q96N53 147 aa8.31□□□□□ -1.08
UBR4-205ENST00000417040 NUPR2A6NF83 97 aa8.3□□□□□ -1.08
UBR4-205ENST00000417040 PRO3102Q9H379 93 aa8.3□□□□□ -1.08
UBR4-205ENST00000417040 RPS28P62857 69 aaKnown RBP8.29□□□□□ -1.08
UBR4-205ENST00000417040 HIVEP2P31629 2446 aa8.29□□□□□ -1.08
UBR4-205ENST00000417040 NHLRC4P0CG21 123 aaPredicted RBP8.29□□□□□ -1.08
UBR4-205ENST00000417040 ELOF1P60002 83 aaKnown RBP8.28□□□□□ -1.08
UBR4-205ENST00000417040 C16orf95Q9H693 158 aa8.28□□□□□ -1.08
UBR4-205ENST00000417040 MOBPQ13875 183 aa8.28□□□□□ -1.08
UBR4-205ENST00000417040 IGLV5-45A0A087WSX0 123 aa8.26□□□□□ -1.09
UBR4-205ENST00000417040 CHTF8P0CG12 524 aa8.26□□□□□ -1.09
UBR4-205ENST00000417040 LITAFQ99732 161 aa8.26□□□□□ -1.09
UBR4-205ENST00000417040 CSPG4Q6UVK1 2322 aa8.26□□□□□ -1.09
UBR4-205ENST00000417040 ANKHD1Q8IWZ3 2542 aaKnown RBP8.26□□□□□ -1.09
UBR4-205ENST00000417040 LINC00476Q8WZB0 136 aa8.25□□□□□ -1.09
UBR4-205ENST00000417040 GOLGB1Q14789 3259 aaKnown RBP8.25□□□□□ -1.09
UBR4-205ENST00000417040 COL27A1Q8IZC6 1860 aaPredicted RBP8.25□□□□□ -1.09
UBR4-205ENST00000417040 PHF5AQ7RTV0 110 aaKnown RBP8.25□□□□□ -1.09
UBR4-205ENST00000417040 SPACA4Q8TDM5 124 aa8.24□□□□□ -1.09
UBR4-205ENST00000417040 F8WDY8 70 aa8.24□□□□□ -1.09
UBR4-205ENST00000417040 LOC110117498A0A087WWA1 95 aa8.24□□□□□ -1.09
UBR4-205ENST00000417040 ACYP2P14621 99 aa8.24□□□□□ -1.09
UBR4-205ENST00000417040 SPG11Q96JI7 2443 aa8.23□□□□□ -1.09
UBR4-205ENST00000417040 EP400Q96L91 3159 aa8.22□□□□□ -1.09
UBR4-205ENST00000417040 A8MUN3 132 aa8.22□□□□□ -1.09
UBR4-205ENST00000417040 EIF4EBP3O60516 100 aaPredicted RBP8.22□□□□□ -1.09
UBR4-205ENST00000417040 FAM168BA1KXE4 195 aa8.21□□□□□ -1.1
UBR4-205ENST00000417040 ATP11AUNQ6ZP68 121 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms