RNA–Protein interactions for RNA: ENST00000411792.1

RFC4-203, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-203ENST00000411792 URB1-AS1Q96HZ7 61 aa11.49□□□□□ -0.57
RFC4-203ENST00000411792 TLX1NBP0CAT3 122 aa11.48□□□□□ -0.57
RFC4-203ENST00000411792 A0A096LNJ9 63 aa11.47□□□□□ -0.57
RFC4-203ENST00000411792 CHCHD1Q96BP2 118 aaKnown RBP11.47□□□□□ -0.57
RFC4-203ENST00000411792 H3BRM9 83 aa11.46□□□□□ -0.57
RFC4-203ENST00000411792 CXCL5P42830 114 aa11.46□□□□□ -0.57
RFC4-203ENST00000411792 GAGE2EQ4V326 116 aa11.46□□□□□ -0.57
RFC4-203ENST00000411792 C9orf116Q5BN46 136 aaPredicted RBP11.46□□□□□ -0.57
RFC4-203ENST00000411792 GAGE2DQ9UEU5 116 aa11.46□□□□□ -0.57
RFC4-203ENST00000411792 IGLV5-45A0A087WSX0 123 aa11.45□□□□□ -0.58
RFC4-203ENST00000411792 PDZD11Q5EBL8 140 aa11.45□□□□□ -0.58
RFC4-203ENST00000411792 BAGE3Q86Y29 109 aa11.45□□□□□ -0.58
RFC4-203ENST00000411792 MYCBP2O75592 4640 aa11.45□□□□□ -0.58
RFC4-203ENST00000411792 SMIM1B2RUZ4 78 aa11.44□□□□□ -0.58
RFC4-203ENST00000411792 Q6ZRP5 223 aa11.44□□□□□ -0.58
RFC4-203ENST00000411792 HERC1Q15751 4861 aa11.44□□□□□ -0.58
RFC4-203ENST00000411792 A0A1W2PNN7 141 aa11.43□□□□□ -0.58
RFC4-203ENST00000411792 NDUFC2-KCTD14E9PQ53 114 aa11.43□□□□□ -0.58
RFC4-203ENST00000411792 F8VRH5 84 aa11.43□□□□□ -0.58
RFC4-203ENST00000411792 HSBP1O75506 76 aa11.43□□□□□ -0.58
RFC4-203ENST00000411792 TRGC2P03986 189 aa11.43□□□□□ -0.58
RFC4-203ENST00000411792 KRTAP29-1A8MX34 341 aaPredicted RBP11.42□□□□□ -0.58
RFC4-203ENST00000411792 SPINK8P0C7L1 97 aa11.42□□□□□ -0.58
RFC4-203ENST00000411792 IGLC3P0DOY3 106 aa11.42□□□□□ -0.58
RFC4-203ENST00000411792 PRR3P79522 188 aaKnown RBP11.42□□□□□ -0.58
RFC4-203ENST00000411792 COX7B2Q8TF08 81 aa11.42□□□□□ -0.58
RFC4-203ENST00000411792 HNRNPA3P51991 378 aaKnown RBP11.4□□□□□ -0.58
RFC4-203ENST00000411792 OXTP01178 125 aa11.39□□□□□ -0.59
RFC4-203ENST00000411792 FAM19A5Q7Z5A7 132 aaPredicted RBP11.39□□□□□ -0.59
RFC4-203ENST00000411792 IFI27L1Q96BM0 104 aa11.38□□□□□ -0.59
RFC4-203ENST00000411792 ZNF22P17026 224 aaPredicted RBP11.37□□□□□ -0.59
RFC4-203ENST00000411792 PHF5AQ7RTV0 110 aaKnown RBP11.37□□□□□ -0.59
RFC4-203ENST00000411792 CHTOPQ9Y3Y2 248 aaKnown RBP11.37□□□□□ -0.59
RFC4-203ENST00000411792 FAM168BA1KXE4 195 aa11.36□□□□□ -0.59
RFC4-203ENST00000411792 TMEM170BQ5T4T1 132 aa11.36□□□□□ -0.59
RFC4-203ENST00000411792 COLCA2A8K830 154 aa11.35□□□□□ -0.59
RFC4-203ENST00000411792 FAM19A2Q8N3H0 131 aa11.35□□□□□ -0.59
RFC4-203ENST00000411792 TRAV12-1A0A0B4J245 112 aa11.34□□□□□ -0.59
RFC4-203ENST00000411792 C11orf86A6NJI1 115 aa11.34□□□□□ -0.59
RFC4-203ENST00000411792 M0QXV9 152 aa11.34□□□□□ -0.59
RFC4-203ENST00000411792 SERF1AO75920 110 aa11.33□□□□□ -0.6
RFC4-203ENST00000411792 C9orf129Q5T035 196 aaKnown RBP11.33□□□□□ -0.6
RFC4-203ENST00000411792 XAGE1AQ9HD64 81 aa11.33□□□□□ -0.6
RFC4-203ENST00000411792 IGLV5-39A0A0G2JS06 123 aa11.32□□□□□ -0.6
RFC4-203ENST00000411792 UBE2BP63146 152 aa11.32□□□□□ -0.6
RFC4-203ENST00000411792 LEPROTL1O95214 131 aa11.31□□□□□ -0.6
RFC4-203ENST00000411792 PSORS1C2Q9UIG4 136 aa11.31□□□□□ -0.6
RFC4-203ENST00000411792 H0Y8G0 127 aa11.3□□□□□ -0.6
RFC4-203ENST00000411792 C1orf137Q5JT78 98 aa11.3□□□□□ -0.6
RFC4-203ENST00000411792 SFTA2Q6UW10 78 aa11.3□□□□□ -0.6
RFC4-203ENST00000411792 SPINK6Q6UWN8 80 aa11.3□□□□□ -0.6
RFC4-203ENST00000411792 SCO1O75880 301 aa11.29□□□□□ -0.6
RFC4-203ENST00000411792 HSPB8Q9UJY1 196 aa11.29□□□□□ -0.6
RFC4-203ENST00000411792 LBHQ53QV2 105 aaPredicted RBP11.27□□□□□ -0.61
RFC4-203ENST00000411792 REG3GQ6UW15 175 aa11.27□□□□□ -0.61
RFC4-203ENST00000411792 PFN2P35080 140 aa11.26□□□□□ -0.61
RFC4-203ENST00000411792 SERTAD4-AS1Q5TG53 156 aa11.26□□□□□ -0.61
RFC4-203ENST00000411792 KRTAP7-1Q8IUC3 87 aa11.26□□□□□ -0.61
RFC4-203ENST00000411792 PKHD1L1Q86WI1 4243 aa11.25□□□□□ -0.61
RFC4-203ENST00000411792 TMEM223A0PJW6 202 aa11.25□□□□□ -0.61
RFC4-203ENST00000411792 FABP4P15090 132 aa11.25□□□□□ -0.61
RFC4-203ENST00000411792 LINC00310P59036 64 aa11.25□□□□□ -0.61
RFC4-203ENST00000411792 ERG28Q9UKR5 140 aa11.25□□□□□ -0.61
RFC4-203ENST00000411792 C22orf24Q9Y442 160 aa11.25□□□□□ -0.61
RFC4-203ENST00000411792 LRP1Q07954 4544 aaKnown RBP11.25□□□□□ -0.61
RFC4-203ENST00000411792 SRSF9Q13242 221 aaKnown RBP eCLIP11.23□□□□□ -0.61
RFC4-203ENST00000411792 COX17Q14061 63 aa11.23□□□□□ -0.61
RFC4-203ENST00000411792 ZNF625Q96I27 306 aaPredicted RBP11.23□□□□□ -0.61
RFC4-203ENST00000411792 NUPR1O60356 82 aa11.22□□□□□ -0.61
RFC4-203ENST00000411792 IGLV7-43P04211 117 aa11.22□□□□□ -0.61
RFC4-203ENST00000411792 ODF1Q14990 250 aa11.22□□□□□ -0.61
RFC4-203ENST00000411792 MRPL55Q7Z7F7 128 aaKnown RBP11.22□□□□□ -0.61
RFC4-203ENST00000411792 TP73-AS1Q9UF72 201 aa11.22□□□□□ -0.61
RFC4-203ENST00000411792 PLNP26678 52 aa11.21□□□□□ -0.61
RFC4-203ENST00000411792 NKAPP1Q8N9T2 125 aa11.21□□□□□ -0.61
RFC4-203ENST00000411792 MAP1LC3CQ9BXW4 147 aa11.21□□□□□ -0.61
RFC4-203ENST00000411792 FAT3Q8TDW7 4589 aa11.2□□□□□ -0.62
RFC4-203ENST00000411792 HIST1H2BKO60814 126 aa11.2□□□□□ -0.62
RFC4-203ENST00000411792 HIST1H2BJP06899 126 aa11.2□□□□□ -0.62
RFC4-203ENST00000411792 HIST1H2BOP23527 126 aa11.2□□□□□ -0.62
RFC4-203ENST00000411792 HIST1H2BBP33778 126 aa11.2□□□□□ -0.62
RFC4-203ENST00000411792 HIST1H2BDP58876 126 aa11.2□□□□□ -0.62
RFC4-203ENST00000411792 HIST1H2BCP62807 126 aa11.2□□□□□ -0.62
RFC4-203ENST00000411792 HIST2H2BEQ16778 126 aa11.2□□□□□ -0.62
RFC4-203ENST00000411792 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.2□□□□□ -0.62
RFC4-203ENST00000411792 KRTAP11-1Q8IUC1 163 aa11.2□□□□□ -0.62
RFC4-203ENST00000411792 HIST1H2BHQ93079 126 aa11.2□□□□□ -0.62
RFC4-203ENST00000411792 HIST1H2BNQ99877 126 aa11.2□□□□□ -0.62
RFC4-203ENST00000411792 HIST1H2BMQ99879 126 aa11.2□□□□□ -0.62
RFC4-203ENST00000411792 PLA2G2DQ9UNK4 145 aa11.2□□□□□ -0.62
RFC4-203ENST00000411792 DIRC1Q969H9 104 aa11.19□□□□□ -0.62
RFC4-203ENST00000411792 DPM2O94777 84 aa11.18□□□□□ -0.62
RFC4-203ENST00000411792 HERVK_113P61574 105 aa11.18□□□□□ -0.62
RFC4-203ENST00000411792 SND1-IT1Q9HBX3 110 aa11.18□□□□□ -0.62
RFC4-203ENST00000411792 ATP6V1G1O75348 118 aa11.17□□□□□ -0.62
RFC4-203ENST00000411792 LINC00158P58513 81 aa11.17□□□□□ -0.62
RFC4-203ENST00000411792 LINC01600Q96MT4 127 aa11.17□□□□□ -0.62
RFC4-203ENST00000411792 HERV-K104P63124 156 aa11.16□□□□□ -0.62
RFC4-203ENST00000411792 RPL24P83731 157 aaKnown RBP11.16□□□□□ -0.62
RFC4-203ENST00000411792 MEIG1Q5JSS6 88 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms