RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 COX17Q14061 63 aa11.54□□□□□ -0.56
LIMS2-208ENST00000410011 GAGE2AQ6NT46 116 aa11.53□□□□□ -0.56
LIMS2-208ENST00000410011 LINC00482Q8N8I6 264 aa11.53□□□□□ -0.56
LIMS2-208ENST00000410011 FAM236AA0A1B0GUQ0 79 aa11.53□□□□□ -0.56
LIMS2-208ENST00000410011 FAM236BA0A1B0GV22 79 aa11.53□□□□□ -0.56
LIMS2-208ENST00000410011 XCL1P47992 114 aa11.53□□□□□ -0.56
LIMS2-208ENST00000410011 JMJD1CQ15652 2540 aa11.52□□□□□ -0.56
LIMS2-208ENST00000410011 LYRM9A8MSI8 78 aa11.52□□□□□ -0.57
LIMS2-208ENST00000410011 NDUFC2O95298 119 aa11.52□□□□□ -0.57
LIMS2-208ENST00000410011 KLK5Q9Y337 293 aaPredicted RBP11.52□□□□□ -0.57
LIMS2-208ENST00000410011 ANK3Q12955 4377 aaKnown RBP11.51□□□□□ -0.57
LIMS2-208ENST00000410011 FLNAP21333 2647 aaKnown RBP11.51□□□□□ -0.57
LIMS2-208ENST00000410011 LECT2O14960 151 aa11.51□□□□□ -0.57
LIMS2-208ENST00000410011 LINC00167Q96N53 147 aa11.51□□□□□ -0.57
LIMS2-208ENST00000410011 IGHV4-28A0A0C4DH34 117 aa11.51□□□□□ -0.57
LIMS2-208ENST00000410011 CD164L2Q6UWJ8 174 aa11.51□□□□□ -0.57
LIMS2-208ENST00000410011 OR13C6PQ8NH95 151 aa11.51□□□□□ -0.57
LIMS2-208ENST00000410011 KIAA0087Q14695 138 aa11.5□□□□□ -0.57
LIMS2-208ENST00000410011 CUBNO60494 3623 aa11.49□□□□□ -0.57
LIMS2-208ENST00000410011 NBPF19A0A087WUL8 3843 aa11.49□□□□□ -0.57
LIMS2-208ENST00000410011 KRTAP10-3P60369 221 aa11.48□□□□□ -0.57
LIMS2-208ENST00000410011 ORMDL1Q9P0S3 153 aa11.48□□□□□ -0.57
LIMS2-208ENST00000410011 CCDC168Q8NDH2 2452 aa11.48□□□□□ -0.57
LIMS2-208ENST00000410011 C9orf129Q5T035 196 aaKnown RBP11.48□□□□□ -0.57
LIMS2-208ENST00000410011 HIST1H4AP62805 103 aaKnown RBP11.47□□□□□ -0.57
LIMS2-208ENST00000410011 C14orf132Q9NPU4 83 aa11.47□□□□□ -0.57
LIMS2-208ENST00000410011 NANOS2P60321 138 aaKnown RBP11.46□□□□□ -0.57
LIMS2-208ENST00000410011 TMEM126AQ9H061 195 aa11.46□□□□□ -0.57
LIMS2-208ENST00000410011 MUC7Q8TAX7 377 aa11.46□□□□□ -0.58
LIMS2-208ENST00000410011 C11orf68Q9H3H3 251 aaKnown RBP11.46□□□□□ -0.58
LIMS2-208ENST00000410011 Q6JHZ5 121 aa11.44□□□□□ -0.58
LIMS2-208ENST00000410011 LINC00269Q8N2A0 174 aa11.44□□□□□ -0.58
LIMS2-208ENST00000410011 UQCRQO14949 82 aa11.44□□□□□ -0.58
LIMS2-208ENST00000410011 CFAP161Q6P656 301 aa11.44□□□□□ -0.58
LIMS2-208ENST00000410011 CHCHD10Q8WYQ3 142 aaPredicted RBP11.44□□□□□ -0.58
LIMS2-208ENST00000410011 PDZD2O15018 2839 aa11.44□□□□□ -0.58
LIMS2-208ENST00000410011 NIPBLQ6KC79 2804 aaeCLIP11.43□□□□□ -0.58
LIMS2-208ENST00000410011 C3orf22Q8N5N4 141 aa11.43□□□□□ -0.58
LIMS2-208ENST00000410011 JMJD7-PLA2G4BH0Y9G9 81 aa11.43□□□□□ -0.58
LIMS2-208ENST00000410011 C9orf66Q5T8R8 295 aa11.43□□□□□ -0.58
LIMS2-208ENST00000410011 Q8N814 137 aa11.43□□□□□ -0.58
LIMS2-208ENST00000410011 REG3AQ06141 175 aa11.42□□□□□ -0.58
LIMS2-208ENST00000410011 CLPSL2Q6UWE3 100 aa11.42□□□□□ -0.58
LIMS2-208ENST00000410011 SVIPQ8NHG7 77 aa11.42□□□□□ -0.58
LIMS2-208ENST00000410011 SETD2Q9BYW2 2564 aaPredicted RBP11.42□□□□□ -0.58
LIMS2-208ENST00000410011 TMEM256-PLSCR3K7ERE1 68 aa11.42□□□□□ -0.58
LIMS2-208ENST00000410011 LINC00846Q9NV44 126 aa11.42□□□□□ -0.58
LIMS2-208ENST00000410011 NCR3O14931 201 aa11.41□□□□□ -0.58
LIMS2-208ENST00000410011 CCKP06307 115 aa11.41□□□□□ -0.58
LIMS2-208ENST00000410011 LINC00526Q96FQ7 95 aa11.41□□□□□ -0.58
LIMS2-208ENST00000410011 A0A096LPF7 62 aa11.41□□□□□ -0.58
LIMS2-208ENST00000410011 SLPIP03973 132 aa11.41□□□□□ -0.58
LIMS2-208ENST00000410011 ATOX1O00244 68 aa11.4□□□□□ -0.59
LIMS2-208ENST00000410011 APOC4P55056 127 aa11.4□□□□□ -0.59
LIMS2-208ENST00000410011 ANGP03950 147 aaKnown RBP11.39□□□□□ -0.59
LIMS2-208ENST00000410011 ACANP16112 2415 aa11.38□□□□□ -0.59
LIMS2-208ENST00000410011 COX7CP15954 63 aa11.37□□□□□ -0.59
LIMS2-208ENST00000410011 DAD1P61803 113 aa11.37□□□□□ -0.59
LIMS2-208ENST00000410011 PRR3P79522 188 aaKnown RBP11.37□□□□□ -0.59
LIMS2-208ENST00000410011 A0A0J9YWU9 116 aa11.36□□□□□ -0.59
LIMS2-208ENST00000410011 IGHV4-30-4P0DP06 118 aa11.36□□□□□ -0.59
LIMS2-208ENST00000410011 MIFP14174 115 aa11.36□□□□□ -0.59
LIMS2-208ENST00000410011 S100A7L2Q5SY68 101 aa11.36□□□□□ -0.59
LIMS2-208ENST00000410011 C2orf48Q96LS8 159 aa11.36□□□□□ -0.59
LIMS2-208ENST00000410011 MTORP42345 2549 aa11.36□□□□□ -0.59
LIMS2-208ENST00000410011 DEFB135Q30KP9 77 aa11.35□□□□□ -0.59
LIMS2-208ENST00000410011 LELP1Q5T871 98 aa11.35□□□□□ -0.59
LIMS2-208ENST00000410011 C9orf153Q5TBE3 101 aa11.35□□□□□ -0.59
LIMS2-208ENST00000410011 RPL18AQ02543 176 aaKnown RBP11.35□□□□□ -0.59
LIMS2-208ENST00000410011 IGLV10-54A0A075B6I4 117 aa11.34□□□□□ -0.59
LIMS2-208ENST00000410011 Q8NAQ8 132 aa11.34□□□□□ -0.59
LIMS2-208ENST00000410011 PRR34Q9NV39 138 aa11.34□□□□□ -0.59
LIMS2-208ENST00000410011 FN1P02751 2386 aaKnown RBP11.34□□□□□ -0.59
LIMS2-208ENST00000410011 CRYGAP11844 174 aa11.33□□□□□ -0.6
LIMS2-208ENST00000410011 C9orf116Q5BN46 136 aaPredicted RBP11.33□□□□□ -0.6
LIMS2-208ENST00000410011 ATP5EP2Q5VTU8 51 aa11.33□□□□□ -0.6
LIMS2-208ENST00000410011 LINC00575Q6W349 94 aa11.33□□□□□ -0.6
LIMS2-208ENST00000410011 C6orf99Q4VX62 202 aa11.32□□□□□ -0.6
LIMS2-208ENST00000410011 Q8N3U1 123 aa11.32□□□□□ -0.6
LIMS2-208ENST00000410011 GVQW2A0A096LPI5 108 aaPredicted RBP11.32□□□□□ -0.6
LIMS2-208ENST00000410011 LYPD5Q6UWN5 251 aa11.32□□□□□ -0.6
LIMS2-208ENST00000410011 J3QKU1 62 aa11.31□□□□□ -0.6
LIMS2-208ENST00000410011 SPART-AS1P0CW21 52 aa11.31□□□□□ -0.6
LIMS2-208ENST00000410011 Q8NDZ9 215 aa11.31□□□□□ -0.6
LIMS2-208ENST00000410011 IGKV3D-7A0A0C4DH55 119 aa11.31□□□□□ -0.6
LIMS2-208ENST00000410011 DEFB4AO15263 64 aa11.31□□□□□ -0.6
LIMS2-208ENST00000410011 SPAG11BQ08648 103 aa11.31□□□□□ -0.6
LIMS2-208ENST00000410011 SPATA3Q8NHX4 192 aa11.31□□□□□ -0.6
LIMS2-208ENST00000410011 SMR3AQ99954 134 aa11.31□□□□□ -0.6
LIMS2-208ENST00000410011 H3BQ85 93 aa11.3□□□□□ -0.6
LIMS2-208ENST00000410011 IGLV6-57P01721 117 aa11.3□□□□□ -0.6
LIMS2-208ENST00000410011 SMIM20Q8N5G0 67 aa11.3□□□□□ -0.6
LIMS2-208ENST00000410011 CELA1Q9UNI1 258 aa11.3□□□□□ -0.6
LIMS2-208ENST00000410011 TENM4Q6N022 2769 aa11.3□□□□□ -0.6
LIMS2-208ENST00000410011 UNQ6190/PRO20217Q6UXQ8 127 aa11.29□□□□□ -0.6
LIMS2-208ENST00000410011 HIVEP2P31629 2446 aa11.29□□□□□ -0.6
LIMS2-208ENST00000410011 C10orf25Q5T742 122 aa11.29□□□□□ -0.6
LIMS2-208ENST00000410011 CYSRT1A8MQ03 144 aa11.28□□□□□ -0.6
LIMS2-208ENST00000410011 TRBV10-3A0A0K0K1G6 114 aa11.27□□□□□ -0.6
LIMS2-208ENST00000410011 hADV29S1A0JD25 119 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms