RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 KLK9Q2XQG4 91 aa7.97□□□□□ -1.13
SNX13-202ENST00000409604 IGLV4-69A0A075B6H9 119 aa7.97□□□□□ -1.13
SNX13-202ENST00000409604 IGKV2-28A0A075B6P5 120 aa7.97□□□□□ -1.13
SNX13-202ENST00000409604 IGKV2D-28P01615 120 aa7.97□□□□□ -1.13
SNX13-202ENST00000409604 PRR3P79522 188 aaKnown RBP7.96□□□□□ -1.14
SNX13-202ENST00000409604 SYCNQ0VAF6 134 aa7.95□□□□□ -1.14
SNX13-202ENST00000409604 TAL2Q16559 108 aa7.95□□□□□ -1.14
SNX13-202ENST00000409604 CSNK1G2-AS1Q8NCQ2 148 aa7.95□□□□□ -1.14
SNX13-202ENST00000409604 TMEM223A0PJW6 202 aa7.94□□□□□ -1.14
SNX13-202ENST00000409604 MIAQ16674 131 aa7.94□□□□□ -1.14
SNX13-202ENST00000409604 HIGD2AQ9BW72 106 aa7.94□□□□□ -1.14
SNX13-202ENST00000409604 UBE2D1P51668 147 aa7.94□□□□□ -1.14
SNX13-202ENST00000409604 ETDBQ3ZM63 59 aa7.94□□□□□ -1.14
SNX13-202ENST00000409604 CD164L2Q6UWJ8 174 aa7.94□□□□□ -1.14
SNX13-202ENST00000409604 RPL37AP8A6NKH3 93 aa7.93□□□□□ -1.14
SNX13-202ENST00000409604 FUSP35637 526 aaKnown RBP eCLIP7.93□□□□□ -1.14
SNX13-202ENST00000409604 NUPR2A6NF83 97 aa7.93□□□□□ -1.14
SNX13-202ENST00000409604 A0A087WZ39 114 aa7.93□□□□□ -1.14
SNX13-202ENST00000409604 CFC1BP0CG36 223 aa7.93□□□□□ -1.14
SNX13-202ENST00000409604 CFC1P0CG37 223 aa7.93□□□□□ -1.14
SNX13-202ENST00000409604 HERV-K104P63124 156 aa7.93□□□□□ -1.14
SNX13-202ENST00000409604 ATXN8Q156A1 80 aa7.93□□□□□ -1.14
SNX13-202ENST00000409604 ETDCA0A1B0GVM5 59 aa7.93□□□□□ -1.14
SNX13-202ENST00000409604 CLEC2BQ92478 149 aa7.93□□□□□ -1.14
SNX13-202ENST00000409604 K7ERU9 68 aa7.92□□□□□ -1.14
SNX13-202ENST00000409604 TMEM126AQ9H061 195 aa7.92□□□□□ -1.14
SNX13-202ENST00000409604 CARD19Q96LW7 228 aa7.92□□□□□ -1.14
SNX13-202ENST00000409604 PYGO1Q9Y3Y4 419 aa7.92□□□□□ -1.14
SNX13-202ENST00000409604 COX11Q9Y6N1 276 aa7.92□□□□□ -1.14
SNX13-202ENST00000409604 TSPEAR-AS2P59090 65 aa7.91□□□□□ -1.14
SNX13-202ENST00000409604 RPL32P62910 135 aaKnown RBP7.91□□□□□ -1.14
SNX13-202ENST00000409604 USP17L23D6RBM5 183 aa7.91□□□□□ -1.14
SNX13-202ENST00000409604 TRAV13-2A0A0B4J235 113 aa7.89□□□□□ -1.15
SNX13-202ENST00000409604 PRSS47A8MTI9 375 aa7.89□□□□□ -1.15
SNX13-202ENST00000409604 NPSP0C0P6 89 aa7.88□□□□□ -1.15
SNX13-202ENST00000409604 TTC32Q5I0X7 151 aa7.88□□□□□ -1.15
SNX13-202ENST00000409604 C9orf118A6NHY6 69 aa7.88□□□□□ -1.15
SNX13-202ENST00000409604 SMIM1B2RUZ4 78 aa7.88□□□□□ -1.15
SNX13-202ENST00000409604 UBE2AP49459 152 aa7.88□□□□□ -1.15
SNX13-202ENST00000409604 TRAV8-4A0A0B4J246 113 aa7.88□□□□□ -1.15
SNX13-202ENST00000409604 B9D2Q9BPU9 175 aa7.88□□□□□ -1.15
SNX13-202ENST00000409604 SLPIP03973 132 aa7.88□□□□□ -1.15
SNX13-202ENST00000409604 GAGE2AQ6NT46 116 aa7.88□□□□□ -1.15
SNX13-202ENST00000409604 TGP01266 2768 aa7.87□□□□□ -1.15
SNX13-202ENST00000409604 NHLRC4P0CG21 123 aaPredicted RBP7.87□□□□□ -1.15
SNX13-202ENST00000409604 SCGB1A1P11684 91 aa7.87□□□□□ -1.15
SNX13-202ENST00000409604 PLAC8L1A1L4L8 177 aa7.87□□□□□ -1.15
SNX13-202ENST00000409604 F8WEM9 126 aa7.87□□□□□ -1.15
SNX13-202ENST00000409604 LINC00588Q9Y4M8 146 aa7.87□□□□□ -1.15
SNX13-202ENST00000409604 H7C423 109 aa7.87□□□□□ -1.15
SNX13-202ENST00000409604 MRPS36P82909 103 aaKnown RBP7.87□□□□□ -1.15
SNX13-202ENST00000409604 LINC00308Q8TCZ7 52 aa7.87□□□□□ -1.15
SNX13-202ENST00000409604 PPDPFQ9H3Y8 114 aa7.87□□□□□ -1.15
SNX13-202ENST00000409604 A0A1W2PPM0 123 aa7.86□□□□□ -1.15
SNX13-202ENST00000409604 DLEU1O43261 78 aa7.85□□□□□ -1.15
SNX13-202ENST00000409604 UFSP1Q6NVU6 142 aa7.85□□□□□ -1.15
SNX13-202ENST00000409604 MUC7Q8TAX7 377 aa7.85□□□□□ -1.15
SNX13-202ENST00000409604 PTH2Q96A98 100 aa7.85□□□□□ -1.15
SNX13-202ENST00000409604 C21orf62-AS1Q17RA5 79 aa7.85□□□□□ -1.15
SNX13-202ENST00000409604 CXCL5P42830 114 aa7.84□□□□□ -1.15
SNX13-202ENST00000409604 ADAMTSL4-AS1Q5T5F5 129 aa7.84□□□□□ -1.15
SNX13-202ENST00000409604 UBE2V1Q13404 147 aa7.84□□□□□ -1.15
SNX13-202ENST00000409604 HAMPP81172 84 aa7.84□□□□□ -1.16
SNX13-202ENST00000409604 A8MTW9 85 aa7.83□□□□□ -1.16
SNX13-202ENST00000409604 IFITM1P13164 125 aa7.83□□□□□ -1.16
SNX13-202ENST00000409604 C6orf99Q4VX62 202 aa7.83□□□□□ -1.16
SNX13-202ENST00000409604 NTN5Q8WTR8 489 aaPredicted RBP7.83□□□□□ -1.16
SNX13-202ENST00000409604 FAM19A1Q7Z5A9 133 aa7.83□□□□□ -1.16
SNX13-202ENST00000409604 C2orf91Q6ZV80 131 aa7.82□□□□□ -1.16
SNX13-202ENST00000409604 AMELXQ99217 191 aa7.82□□□□□ -1.16
SNX13-202ENST00000409604 TENM3Q9P273 2699 aa7.82□□□□□ -1.16
SNX13-202ENST00000409604 BAALC-AS2P0C853 105 aa7.82□□□□□ -1.16
SNX13-202ENST00000409604 OCIAD2Q56VL3 154 aa7.82□□□□□ -1.16
SNX13-202ENST00000409604 C1orf134Q5TEV5 83 aa7.82□□□□□ -1.16
SNX13-202ENST00000409604 Q6ZRU5 148 aa7.82□□□□□ -1.16
SNX13-202ENST00000409604 MRPL52Q86TS9 123 aaKnown RBP7.82□□□□□ -1.16
SNX13-202ENST00000409604 SPANXCQ9NY87 97 aa7.82□□□□□ -1.16
SNX13-202ENST00000409604 TAX1BP3O14907 124 aa7.81□□□□□ -1.16
SNX13-202ENST00000409604 C10orf25Q5T742 122 aa7.81□□□□□ -1.16
SNX13-202ENST00000409604 EGFEM1PQ0D2K5 195 aa7.8□□□□□ -1.16
SNX13-202ENST00000409604 IBA57-AS1B1ANH7 110 aa7.8□□□□□ -1.16
SNX13-202ENST00000409604 WFDC2Q14508 124 aa7.8□□□□□ -1.16
SNX13-202ENST00000409604 C14orf177Q52M58 125 aa7.8□□□□□ -1.16
SNX13-202ENST00000409604 HIST1H4AP62805 103 aaKnown RBP7.8□□□□□ -1.16
SNX13-202ENST00000409604 DNAH10OSP0CZ25 163 aa7.8□□□□□ -1.16
SNX13-202ENST00000409604 ZNF575Q86XF7 245 aa7.8□□□□□ -1.16
SNX13-202ENST00000409604 DIRC1Q969H9 104 aa7.79□□□□□ -1.16
SNX13-202ENST00000409604 A0A1B0GUV1 79 aa7.79□□□□□ -1.16
SNX13-202ENST00000409604 HIGD1BQ9P298 99 aa7.79□□□□□ -1.16
SNX13-202ENST00000409604 IGLV5-52A0A0A0MRZ9 124 aa7.78□□□□□ -1.16
SNX13-202ENST00000409604 VPS13CQ709C8 3753 aa7.78□□□□□ -1.16
SNX13-202ENST00000409604 IGHV3OR16-9A0A0B4J2B5 98 aa7.78□□□□□ -1.16
SNX13-202ENST00000409604 ENHOQ6UWT2 76 aa7.78□□□□□ -1.16
SNX13-202ENST00000409604 WWC2-AS2Q96NR7 200 aa7.78□□□□□ -1.16
SNX13-202ENST00000409604 Q8IZM0 81 aa7.77□□□□□ -1.17
SNX13-202ENST00000409604 K7EP34 96 aa7.76□□□□□ -1.17
SNX13-202ENST00000409604 TM2D3Q9BRN9 247 aa7.76□□□□□ -1.17
SNX13-202ENST00000409604 TRBV20-1A0A075B6N2 111 aa7.76□□□□□ -1.17
SNX13-202ENST00000409604 CHTF8P0CG12 524 aa7.76□□□□□ -1.17
SNX13-202ENST00000409604 CSDC2Q9Y534 153 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms