RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 PACRGQ96M98 296 aaPredicted RBP9.01□□□□□ -0.97
NIF3L1-205ENST00000409588 A0A0J9YXV3 536 aa9□□□□□ -0.97
NIF3L1-205ENST00000409588 IFITM2Q01629 132 aa9□□□□□ -0.97
NIF3L1-205ENST00000409588 ERASQ7Z444 233 aa9□□□□□ -0.97
NIF3L1-205ENST00000409588 TOMM6Q96B49 74 aa9□□□□□ -0.97
NIF3L1-205ENST00000409588 C6orf48Q9UBA6 75 aa9□□□□□ -0.97
NIF3L1-205ENST00000409588 MT-ND6P03923 174 aa8.99□□□□□ -0.97
NIF3L1-205ENST00000409588 PRSS2P07478 247 aa8.99□□□□□ -0.97
NIF3L1-205ENST00000409588 ADCYAP1P18509 176 aa8.99□□□□□ -0.97
NIF3L1-205ENST00000409588 C6orf226Q5I0X4 101 aa8.99□□□□□ -0.97
NIF3L1-205ENST00000409588 C10orf25Q5T742 122 aa8.99□□□□□ -0.97
NIF3L1-205ENST00000409588 NDUFC2-KCTD14E9PQ53 114 aa8.98□□□□□ -0.97
NIF3L1-205ENST00000409588 EIF4EBP3O60516 100 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-205ENST00000409588 CKS1BP61024 79 aa8.98□□□□□ -0.97
NIF3L1-205ENST00000409588 ODF1Q14990 250 aa8.98□□□□□ -0.97
NIF3L1-205ENST00000409588 LINC00173Q6ZV60 143 aa8.98□□□□□ -0.97
NIF3L1-205ENST00000409588 Q8IZM0 81 aa8.98□□□□□ -0.97
NIF3L1-205ENST00000409588 LINC01546A6NGU7 62 aa8.97□□□□□ -0.97
NIF3L1-205ENST00000409588 C10orf91Q5T1B1 145 aa8.97□□□□□ -0.97
NIF3L1-205ENST00000409588 GEMIN7Q9H840 131 aaKnown RBP8.97□□□□□ -0.97
NIF3L1-205ENST00000409588 PSORS1C2Q9UIG4 136 aa8.97□□□□□ -0.97
NIF3L1-205ENST00000409588 RHEBQ15382 184 aa8.96□□□□□ -0.98
NIF3L1-205ENST00000409588 KIAA1644Q3SXP7 199 aa8.96□□□□□ -0.98
NIF3L1-205ENST00000409588 SCGB3A1Q96QR1 104 aa8.96□□□□□ -0.98
NIF3L1-205ENST00000409588 ALKBH7Q9BT30 221 aaPredicted RBP8.96□□□□□ -0.98
NIF3L1-205ENST00000409588 KRTAP10-8P60410 259 aa8.95□□□□□ -0.98
NIF3L1-205ENST00000409588 GAGE2EQ4V326 116 aa8.95□□□□□ -0.98
NIF3L1-205ENST00000409588 GAGE2DQ9UEU5 116 aa8.95□□□□□ -0.98
NIF3L1-205ENST00000409588 HMCN2Q8NDA2 5059 aa8.94□□□□□ -0.98
NIF3L1-205ENST00000409588 CXCL5P42830 114 aa8.94□□□□□ -0.98
NIF3L1-205ENST00000409588 C1orf137Q5JT78 98 aa8.94□□□□□ -0.98
NIF3L1-205ENST00000409588 C2orf82Q6UX34 121 aa8.94□□□□□ -0.98
NIF3L1-205ENST00000409588 PHF5AQ7RTV0 110 aaKnown RBP8.94□□□□□ -0.98
NIF3L1-205ENST00000409588 COMMD7Q86VX2 200 aa8.94□□□□□ -0.98
NIF3L1-205ENST00000409588 TINCRA0A1B0GVN0 87 aa8.93□□□□□ -0.98
NIF3L1-205ENST00000409588 ZC2HC1BQ5TFG8 222 aa8.93□□□□□ -0.98
NIF3L1-205ENST00000409588 CDKN2A-AS1Q9UH64 79 aa8.93□□□□□ -0.98
NIF3L1-205ENST00000409588 CARHSP1Q9Y2V2 147 aaKnown RBP8.93□□□□□ -0.98
NIF3L1-205ENST00000409588 F8VRH5 84 aa8.92□□□□□ -0.98
NIF3L1-205ENST00000409588 FABP9Q0Z7S8 132 aa8.92□□□□□ -0.98
NIF3L1-205ENST00000409588 PDZD11Q5EBL8 140 aa8.92□□□□□ -0.98
NIF3L1-205ENST00000409588 DIRC1Q969H9 104 aa8.92□□□□□ -0.98
NIF3L1-205ENST00000409588 SMCO4Q9NRQ5 59 aa8.92□□□□□ -0.98
NIF3L1-205ENST00000409588 TOMM7Q9P0U1 55 aa8.92□□□□□ -0.98
NIF3L1-205ENST00000409588 IGLV7-43P04211 117 aa8.91□□□□□ -0.98
NIF3L1-205ENST00000409588 KRTAP19-4Q3LI73 84 aa8.91□□□□□ -0.98
NIF3L1-205ENST00000409588 FA2HQ7L5A8 372 aa8.91□□□□□ -0.98
NIF3L1-205ENST00000409588 RPS10P5Q9NQ39 176 aa8.91□□□□□ -0.98
NIF3L1-205ENST00000409588 IGLV5-45A0A087WSX0 123 aa8.9□□□□□ -0.98
NIF3L1-205ENST00000409588 FAM168BA1KXE4 195 aa8.9□□□□□ -0.98
NIF3L1-205ENST00000409588 PMVKQ15126 192 aa8.9□□□□□ -0.98
NIF3L1-205ENST00000409588 FAM19A5Q7Z5A7 132 aaPredicted RBP8.9□□□□□ -0.98
NIF3L1-205ENST00000409588 CST9LQ9H4G1 147 aa8.9□□□□□ -0.98
NIF3L1-205ENST00000409588 M0QXV9 152 aa8.89□□□□□ -0.99
NIF3L1-205ENST00000409588 LBHQ53QV2 105 aaPredicted RBP8.89□□□□□ -0.99
NIF3L1-205ENST00000409588 LINC00469Q8N7U9 141 aa8.89□□□□□ -0.99
NIF3L1-205ENST00000409588 UBE2BP63146 152 aa8.88□□□□□ -0.99
NIF3L1-205ENST00000409588 C9orf129Q5T035 196 aaKnown RBP8.88□□□□□ -0.99
NIF3L1-205ENST00000409588 H3BRM9 83 aa8.87□□□□□ -0.99
NIF3L1-205ENST00000409588 NDUFA5Q16718 116 aa8.87□□□□□ -0.99
NIF3L1-205ENST00000409588 TP73-AS1Q9UF72 201 aa8.87□□□□□ -0.99
NIF3L1-205ENST00000409588 TNXBP22105 4242 aa8.86□□□□□ -0.99
NIF3L1-205ENST00000409588 SMIM1B2RUZ4 78 aa8.86□□□□□ -0.99
NIF3L1-205ENST00000409588 SNAPINO95295 136 aa8.86□□□□□ -0.99
NIF3L1-205ENST00000409588 LINC00614P0C842 121 aa8.86□□□□□ -0.99
NIF3L1-205ENST00000409588 RAB5BP61020 215 aa8.86□□□□□ -0.99
NIF3L1-205ENST00000409588 LCE5AQ5TCM9 118 aa8.86□□□□□ -0.99
NIF3L1-205ENST00000409588 KRTAP7-1Q8IUC3 87 aa8.86□□□□□ -0.99
NIF3L1-205ENST00000409588 COX7B2Q8TF08 81 aa8.86□□□□□ -0.99
NIF3L1-205ENST00000409588 TRAPPC1Q9Y5R8 145 aa8.86□□□□□ -0.99
NIF3L1-205ENST00000409588 H0Y9J4 135 aa8.85□□□□□ -0.99
NIF3L1-205ENST00000409588 NUPR1O60356 82 aa8.85□□□□□ -0.99
NIF3L1-205ENST00000409588 SVBPQ8N300 66 aa8.85□□□□□ -0.99
NIF3L1-205ENST00000409588 C22orf24Q9Y442 160 aa8.84□□□□□ -0.99
NIF3L1-205ENST00000409588 IGLV1-50A0A075B6I6 118 aa8.82□□□□□ -1
NIF3L1-205ENST00000409588 ATP5LO75964 103 aa8.82□□□□□ -1
NIF3L1-205ENST00000409588 APOC3P02656 99 aa8.82□□□□□ -1
NIF3L1-205ENST00000409588 IGLC3P0DOY3 106 aa8.82□□□□□ -1
NIF3L1-205ENST00000409588 SFTA2Q6UW10 78 aa8.82□□□□□ -1
NIF3L1-205ENST00000409588 KRTAP11-1Q8IUC1 163 aa8.82□□□□□ -1
NIF3L1-205ENST00000409588 C18orf32Q8TCD1 76 aa8.82□□□□□ -1
NIF3L1-205ENST00000409588 XAGE1AQ9HD64 81 aa8.82□□□□□ -1
NIF3L1-205ENST00000409588 ZNF861PO60384 105 aa8.81□□□□□ -1
NIF3L1-205ENST00000409588 HBDP02042 147 aa8.81□□□□□ -1
NIF3L1-205ENST00000409588 UBR4Q5T4S7 5183 aa8.81□□□□□ -1
NIF3L1-205ENST00000409588 MRPL55Q7Z7F7 128 aaKnown RBP8.8□□□□□ -1
NIF3L1-205ENST00000409588 SPINK8P0C7L1 97 aa8.79□□□□□ -1
NIF3L1-205ENST00000409588 RPL13AP40429 203 aaKnown RBP8.79□□□□□ -1
NIF3L1-205ENST00000409588 NDUFA6P56556 154 aa8.79□□□□□ -1
NIF3L1-205ENST00000409588 COX17Q14061 63 aa8.79□□□□□ -1
NIF3L1-205ENST00000409588 A0A096LNJ9 63 aa8.78□□□□□ -1
NIF3L1-205ENST00000409588 IGLV5-39A0A0G2JS06 123 aa8.78□□□□□ -1
NIF3L1-205ENST00000409588 IGLV5-37A0A075B6J1 123 aa8.77□□□□□ -1.01
NIF3L1-205ENST00000409588 URB1-AS1Q96HZ7 61 aa8.77□□□□□ -1.01
NIF3L1-205ENST00000409588 RPL28P46779 137 aaKnown RBP8.76□□□□□ -1.01
NIF3L1-205ENST00000409588 BAGE3Q86Y29 109 aa8.76□□□□□ -1.01
NIF3L1-205ENST00000409588 PRR26Q8N8Z3 221 aa8.76□□□□□ -1.01
NIF3L1-205ENST00000409588 CHCHD1Q96BP2 118 aaKnown RBP8.76□□□□□ -1.01
NIF3L1-205ENST00000409588 BCE1O60756 84 aa8.75□□□□□ -1.01
NIF3L1-205ENST00000409588 KRTAP1-4P0C5Y4 121 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms