RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 NAV2Q8IVL1 2488 aa3.48□□□□□ -1.85
SCN3A-203ENST00000409101 WFDC2Q14508 124 aa3.47□□□□□ -1.85
SCN3A-203ENST00000409101 PRR3P79522 188 aaKnown RBP3.47□□□□□ -1.85
SCN3A-203ENST00000409101 SHANK1Q9Y566 2161 aa3.47□□□□□ -1.85
SCN3A-203ENST00000409101 K7ERS5 55 aa3.47□□□□□ -1.85
SCN3A-203ENST00000409101 TAX1BP3O14907 124 aa3.47□□□□□ -1.85
SCN3A-203ENST00000409101 Q6Q795 121 aa3.47□□□□□ -1.85
SCN3A-203ENST00000409101 LINC00643Q86TS7 51 aa3.47□□□□□ -1.85
SCN3A-203ENST00000409101 C19orf73Q9NVV2 129 aa3.47□□□□□ -1.85
SCN3A-203ENST00000409101 TP73-AS1Q9UF72 201 aa3.47□□□□□ -1.85
SCN3A-203ENST00000409101 FAM19A4Q96LR4 140 aa3.47□□□□□ -1.85
SCN3A-203ENST00000409101 NOTCH2Q04721 2471 aa3.47□□□□□ -1.85
SCN3A-203ENST00000409101 NDUFC2O95298 119 aa3.47□□□□□ -1.85
SCN3A-203ENST00000409101 IGF2RP11717 2491 aa3.46□□□□□ -1.85
SCN3A-203ENST00000409101 CRYGAP11844 174 aa3.46□□□□□ -1.86
SCN3A-203ENST00000409101 Q8N814 137 aa3.46□□□□□ -1.86
SCN3A-203ENST00000409101 TYMSOSQ8TAI1 123 aa3.46□□□□□ -1.86
SCN3A-203ENST00000409101 PRR15LQ9BU68 103 aa3.46□□□□□ -1.86
SCN3A-203ENST00000409101 SDIM1Q6ZPB5 146 aa3.46□□□□□ -1.86
SCN3A-203ENST00000409101 KRTAP1-3Q8IUG1 177 aa3.46□□□□□ -1.86
SCN3A-203ENST00000409101 SPACA4Q8TDM5 124 aa3.46□□□□□ -1.86
SCN3A-203ENST00000409101 EXPH5Q8NEV8 1989 aa3.46□□□□□ -1.86
SCN3A-203ENST00000409101 SERP1Q9Y6X1 66 aa3.46□□□□□ -1.86
SCN3A-203ENST00000409101 MED13LQ71F56 2210 aa3.46□□□□□ -1.86
SCN3A-203ENST00000409101 J3KT08 172 aa3.46□□□□□ -1.86
SCN3A-203ENST00000409101 PHF5AQ7RTV0 110 aaKnown RBP3.46□□□□□ -1.86
SCN3A-203ENST00000409101 C3orf22Q8N5N4 141 aa3.45□□□□□ -1.86
SCN3A-203ENST00000409101 HIVEP3Q5T1R4 2406 aa3.45□□□□□ -1.86
SCN3A-203ENST00000409101 PCSK5Q92824 1860 aa3.45□□□□□ -1.86
SCN3A-203ENST00000409101 CHTF8P0CG12 524 aa3.44□□□□□ -1.86
SCN3A-203ENST00000409101 Q8N9L7 120 aa3.44□□□□□ -1.86
SCN3A-203ENST00000409101 DNAH10OSP0CZ25 163 aa3.44□□□□□ -1.86
SCN3A-203ENST00000409101 MOBPQ13875 183 aa3.44□□□□□ -1.86
SCN3A-203ENST00000409101 LINC00167Q96N53 147 aa3.44□□□□□ -1.86
SCN3A-203ENST00000409101 TM2D3Q9BRN9 247 aa3.44□□□□□ -1.86
SCN3A-203ENST00000409101 NACAE9PAV3 2078 aa3.44□□□□□ -1.86
SCN3A-203ENST00000409101 PRR4Q16378 134 aa3.44□□□□□ -1.86
SCN3A-203ENST00000409101 COL27A1Q8IZC6 1860 aaPredicted RBP3.44□□□□□ -1.86
SCN3A-203ENST00000409101 NTM-AS1Q6ZSK4 140 aa3.43□□□□□ -1.86
SCN3A-203ENST00000409101 C6orf48Q9UBA6 75 aa3.43□□□□□ -1.86
SCN3A-203ENST00000409101 FAM30AQ9NZY2 134 aa3.43□□□□□ -1.86
SCN3A-203ENST00000409101 A0A087WSZ3 146 aa3.43□□□□□ -1.86
SCN3A-203ENST00000409101 KRTAP1-1Q07627 177 aa3.43□□□□□ -1.86
SCN3A-203ENST00000409101 A0A087WYN8 130 aa3.43□□□□□ -1.86
SCN3A-203ENST00000409101 CHD8Q9HCK8 2581 aa3.42□□□□□ -1.86
SCN3A-203ENST00000409101 GVQW2A0A096LPI5 108 aaPredicted RBP3.42□□□□□ -1.86
SCN3A-203ENST00000409101 PKD1L2Q7Z442 2459 aa3.42□□□□□ -1.86
SCN3A-203ENST00000409101 ARHGAP32A7KAX9 2087 aa3.42□□□□□ -1.86
SCN3A-203ENST00000409101 Q8NBF4 154 aa3.42□□□□□ -1.86
SCN3A-203ENST00000409101 CSPG4Q6UVK1 2322 aa3.42□□□□□ -1.86
SCN3A-203ENST00000409101 TSPEAR-AS2P59090 65 aa3.42□□□□□ -1.86
SCN3A-203ENST00000409101 Q8N3U1 123 aa3.42□□□□□ -1.86
SCN3A-203ENST00000409101 NAV3Q8IVL0 2385 aa3.42□□□□□ -1.86
SCN3A-203ENST00000409101 ATRXP46100 2492 aa3.42□□□□□ -1.86
SCN3A-203ENST00000409101 KLK9Q2XQG4 91 aa3.42□□□□□ -1.86
SCN3A-203ENST00000409101 ADAMTSL4-AS1Q5T5F5 129 aa3.41□□□□□ -1.86
SCN3A-203ENST00000409101 LINC00575Q6W349 94 aa3.41□□□□□ -1.86
SCN3A-203ENST00000409101 BCE1O60756 84 aa3.41□□□□□ -1.86
SCN3A-203ENST00000409101 SPG11Q96JI7 2443 aa3.41□□□□□ -1.86
SCN3A-203ENST00000409101 EPM2AB3EWF7 344 aa3.41□□□□□ -1.86
SCN3A-203ENST00000409101 B5MCH6 92 aa3.41□□□□□ -1.86
SCN3A-203ENST00000409101 YPEL4Q96NS1 127 aa3.41□□□□□ -1.86
SCN3A-203ENST00000409101 PLCE1Q9P212 2302 aa3.4□□□□□ -1.86
SCN3A-203ENST00000409101 CSNK1G2-AS1Q8NCQ2 148 aa3.4□□□□□ -1.86
SCN3A-203ENST00000409101 APLNQ9ULZ1 77 aa3.4□□□□□ -1.86
SCN3A-203ENST00000409101 A0A087WTM6 91 aa3.4□□□□□ -1.87
SCN3A-203ENST00000409101 DEFB116Q30KQ4 102 aa3.4□□□□□ -1.87
SCN3A-203ENST00000409101 IGHV3OR16-9A0A0B4J2B5 98 aa3.4□□□□□ -1.87
SCN3A-203ENST00000409101 SMR3BP02814 79 aaPredicted RBP3.4□□□□□ -1.87
SCN3A-203ENST00000409101 ATP11AUNQ6ZP68 121 aa3.4□□□□□ -1.87
SCN3A-203ENST00000409101 A8MTW9 85 aa3.4□□□□□ -1.87
SCN3A-203ENST00000409101 COX6B2Q6YFQ2 88 aa3.4□□□□□ -1.87
SCN3A-203ENST00000409101 KIAA0087Q14695 138 aa3.39□□□□□ -1.87
SCN3A-203ENST00000409101 IGLV5-39A0A0G2JS06 123 aa3.39□□□□□ -1.87
SCN3A-203ENST00000409101 C20orf197Q8N268 126 aa3.39□□□□□ -1.87
SCN3A-203ENST00000409101 URB1-AS1Q96HZ7 61 aa3.39□□□□□ -1.87
SCN3A-203ENST00000409101 LINC01547P58512 204 aaPredicted RBP3.39□□□□□ -1.87
SCN3A-203ENST00000409101 CASC10Q5T4H9 136 aa3.39□□□□□ -1.87
SCN3A-203ENST00000409101 C2orf91Q6ZV80 131 aa3.39□□□□□ -1.87
SCN3A-203ENST00000409101 HCG22E2RYF7 251 aa3.38□□□□□ -1.87
SCN3A-203ENST00000409101 IGKV2D-30A0A075B6S6 120 aa3.38□□□□□ -1.87
SCN3A-203ENST00000409101 TRBV7-6A0A0J9YX20 115 aa3.38□□□□□ -1.87
SCN3A-203ENST00000409101 SPINK1P00995 79 aa3.38□□□□□ -1.87
SCN3A-203ENST00000409101 IGKV2-30P06310 120 aa3.38□□□□□ -1.87
SCN3A-203ENST00000409101 LINC00476Q8WZB0 136 aa3.38□□□□□ -1.87
SCN3A-203ENST00000409101 TNCP24821 2201 aa3.37□□□□□ -1.87
SCN3A-203ENST00000409101 NOTCH3Q9UM47 2321 aa3.37□□□□□ -1.87
SCN3A-203ENST00000409101 LINC01546A6NGU7 62 aa3.37□□□□□ -1.87
SCN3A-203ENST00000409101 Q6ZRX8 168 aa3.37□□□□□ -1.87
SCN3A-203ENST00000409101 LINC00304Q8N9R0 145 aa3.37□□□□□ -1.87
SCN3A-203ENST00000409101 SERP2Q8N6R1 65 aa3.37□□□□□ -1.87
SCN3A-203ENST00000409101 CCDC168Q8NDH2 2452 aa3.37□□□□□ -1.87
SCN3A-203ENST00000409101 LINC00528Q8N1L1 170 aa3.37□□□□□ -1.87
SCN3A-203ENST00000409101 HCFC1P51610 2035 aa3.37□□□□□ -1.87
SCN3A-203ENST00000409101 LINC00313P59037 77 aa3.36□□□□□ -1.87
SCN3A-203ENST00000409101 ELOF1P60002 83 aaKnown RBP3.36□□□□□ -1.87
SCN3A-203ENST00000409101 Q96NJ1 140 aa3.36□□□□□ -1.87
SCN3A-203ENST00000409101 PRR14LQ5THK1 2151 aa3.36□□□□□ -1.87
SCN3A-203ENST00000409101 C7orf65Q6ZTY9 151 aa3.36□□□□□ -1.87
SCN3A-203ENST00000409101 LINC00208Q96KT6 92 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms