RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 IGHV3OR16-9A0A0B4J2B5 98 aa3.93□□□□□ -1.78
RPA3-204ENST00000406109 LINC01549A6NIU2 74 aa3.93□□□□□ -1.78
RPA3-204ENST00000406109 NPSP0C0P6 89 aa3.93□□□□□ -1.78
RPA3-204ENST00000406109 SDIM1Q6ZPB5 146 aa3.93□□□□□ -1.78
RPA3-204ENST00000406109 BAGE3Q86Y29 109 aa3.93□□□□□ -1.78
RPA3-204ENST00000406109 AMELXQ99217 191 aa3.93□□□□□ -1.78
RPA3-204ENST00000406109 TIMM17AQ99595 171 aa3.93□□□□□ -1.78
RPA3-204ENST00000406109 A0A0J9YXV3 536 aa3.92□□□□□ -1.78
RPA3-204ENST00000406109 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.92□□□□□ -1.78
RPA3-204ENST00000406109 HBDP02042 147 aa3.92□□□□□ -1.78
RPA3-204ENST00000406109 SYCNQ0VAF6 134 aa3.92□□□□□ -1.78
RPA3-204ENST00000406109 PMVKQ15126 192 aa3.92□□□□□ -1.78
RPA3-204ENST00000406109 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
RPA3-204ENST00000406109 LINC00173Q6ZV60 143 aa3.92□□□□□ -1.78
RPA3-204ENST00000406109 ORAOV1Q8WV07 137 aa3.92□□□□□ -1.78
RPA3-204ENST00000406109 CST9LQ9H4G1 147 aa3.92□□□□□ -1.78
RPA3-204ENST00000406109 GEMIN7Q9H840 131 aaKnown RBP3.92□□□□□ -1.78
RPA3-204ENST00000406109 A0A087WZ39 114 aa3.91□□□□□ -1.78
RPA3-204ENST00000406109 SEC11AP67812 179 aa3.91□□□□□ -1.78
RPA3-204ENST00000406109 SPAG11BQ08648 103 aa3.91□□□□□ -1.78
RPA3-204ENST00000406109 CIRBPQ14011 172 aaKnown RBP3.91□□□□□ -1.78
RPA3-204ENST00000406109 OR10D4PQ8NGN7 298 aa3.91□□□□□ -1.78
RPA3-204ENST00000406109 CHCHD1Q96BP2 118 aaKnown RBP3.91□□□□□ -1.78
RPA3-204ENST00000406109 CARD19Q96LW7 228 aa3.91□□□□□ -1.78
RPA3-204ENST00000406109 CAMK2N2Q96S95 79 aa3.91□□□□□ -1.78
RPA3-204ENST00000406109 A0A096LNJ9 63 aa3.9□□□□□ -1.79
RPA3-204ENST00000406109 IGKV2-24A0A0C4DH68 120 aa3.9□□□□□ -1.79
RPA3-204ENST00000406109 HSBP1O75506 76 aa3.9□□□□□ -1.79
RPA3-204ENST00000406109 ATP5LO75964 103 aa3.9□□□□□ -1.79
RPA3-204ENST00000406109 PRSS2P07478 247 aa3.9□□□□□ -1.79
RPA3-204ENST00000406109 CHTF8P0CG12 524 aa3.9□□□□□ -1.79
RPA3-204ENST00000406109 HERVK_113P63121 156 aa3.9□□□□□ -1.79
RPA3-204ENST00000406109 PDZD11Q5EBL8 140 aa3.9□□□□□ -1.79
RPA3-204ENST00000406109 C6orf226Q5I0X4 101 aa3.9□□□□□ -1.79
RPA3-204ENST00000406109 UNQ6190/PRO20217Q6UXQ8 127 aa3.9□□□□□ -1.79
RPA3-204ENST00000406109 FAM19A3Q7Z5A8 133 aa3.9□□□□□ -1.79
RPA3-204ENST00000406109 FAM19A2Q8N3H0 131 aa3.9□□□□□ -1.79
RPA3-204ENST00000406109 LINC00469Q8N7U9 141 aa3.9□□□□□ -1.79
RPA3-204ENST00000406109 C2orf48Q96LS8 159 aa3.9□□□□□ -1.79
RPA3-204ENST00000406109 PACRGQ96M98 296 aaPredicted RBP3.9□□□□□ -1.79
RPA3-204ENST00000406109 LINC01600Q96MT4 127 aa3.9□□□□□ -1.79
RPA3-204ENST00000406109 TOMM7Q9P0U1 55 aa3.9□□□□□ -1.79
RPA3-204ENST00000406109 CDKN2A-AS1Q9UH64 79 aa3.9□□□□□ -1.79
RPA3-204ENST00000406109 TINCRA0A1B0GVN0 87 aa3.89□□□□□ -1.79
RPA3-204ENST00000406109 F8WDY8 70 aa3.89□□□□□ -1.79
RPA3-204ENST00000406109 NDUFA1O15239 70 aa3.89□□□□□ -1.79
RPA3-204ENST00000406109 KRTAP10-8P60410 259 aa3.89□□□□□ -1.79
RPA3-204ENST00000406109 CKS1BP61024 79 aa3.89□□□□□ -1.79
RPA3-204ENST00000406109 GAGE2BQ13066 116 aa3.89□□□□□ -1.79
RPA3-204ENST00000406109 KIAA0087Q14695 138 aa3.89□□□□□ -1.79
RPA3-204ENST00000406109 MAJINQ3KP22 176 aa3.89□□□□□ -1.79
RPA3-204ENST00000406109 C10orf25Q5T742 122 aa3.89□□□□□ -1.79
RPA3-204ENST00000406109 LINC01561Q8N1V8 128 aa3.89□□□□□ -1.79
RPA3-204ENST00000406109 MUC17Q685J3 4493 aa3.89□□□□□ -1.79
RPA3-204ENST00000406109 FSIP2Q5CZC0 6907 aa3.88□□□□□ -1.79
RPA3-204ENST00000406109 A0A087WYN8 130 aa3.88□□□□□ -1.79
RPA3-204ENST00000406109 A0A096LNI7 61 aa3.88□□□□□ -1.79
RPA3-204ENST00000406109 LOC107984640A0A0U1RRK4 108 aa3.88□□□□□ -1.79
RPA3-204ENST00000406109 NUPR1O60356 82 aa3.88□□□□□ -1.79
RPA3-204ENST00000406109 SERF1AO75920 110 aa3.88□□□□□ -1.79
RPA3-204ENST00000406109 SPINK8P0C7L1 97 aa3.88□□□□□ -1.79
RPA3-204ENST00000406109 S100A1P23297 94 aa3.88□□□□□ -1.79
RPA3-204ENST00000406109 C2orf82Q6UX34 121 aa3.88□□□□□ -1.79
RPA3-204ENST00000406109 STPG4Q8N801 248 aa3.88□□□□□ -1.79
RPA3-204ENST00000406109 IFI27L1Q96BM0 104 aa3.88□□□□□ -1.79
RPA3-204ENST00000406109 MRPL35Q9NZE8 188 aaKnown RBP3.88□□□□□ -1.79
RPA3-204ENST00000406109 PKIGQ9Y2B9 76 aa3.88□□□□□ -1.79
RPA3-204ENST00000406109 H0Y8G0 127 aa3.87□□□□□ -1.79
RPA3-204ENST00000406109 H3BRM9 83 aa3.87□□□□□ -1.79
RPA3-204ENST00000406109 LEPROTL1O95214 131 aa3.87□□□□□ -1.79
RPA3-204ENST00000406109 FABP4P15090 132 aa3.87□□□□□ -1.79
RPA3-204ENST00000406109 RPL18AQ02543 176 aaKnown RBP3.87□□□□□ -1.79
RPA3-204ENST00000406109 RNF151Q2KHN1 245 aa3.87□□□□□ -1.79
RPA3-204ENST00000406109 SPACA4Q8TDM5 124 aa3.87□□□□□ -1.79
RPA3-204ENST00000406109 COX7B2Q8TF08 81 aa3.87□□□□□ -1.79
RPA3-204ENST00000406109 LINC00474Q9P2X8 69 aa3.87□□□□□ -1.79
RPA3-204ENST00000406109 C6orf48Q9UBA6 75 aa3.87□□□□□ -1.79
RPA3-204ENST00000406109 CHTOPQ9Y3Y2 248 aaKnown RBP3.87□□□□□ -1.79
RPA3-204ENST00000406109 IGLV5-45A0A087WSX0 123 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 SMIM1B2RUZ4 78 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 HIST1H2BKO60814 126 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 HIST1H2BJP06899 126 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 IGLC3P0DOY3 106 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 HIST1H2BOP23527 126 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 HIST1H2BBP33778 126 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 PTTG1IPP53801 180 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 HIST1H2BDP58876 126 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 HIST1H2BCP62807 126 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 HIST2H2BEQ16778 126 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 GAGE2EQ4V326 116 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 C9orf116Q5BN46 136 aaPredicted RBP3.86□□□□□ -1.79
RPA3-204ENST00000406109 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.86□□□□□ -1.79
RPA3-204ENST00000406109 TMEM170BQ5T4T1 132 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 Q8IZM0 81 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 HIST1H2BHQ93079 126 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 HIST1H2BNQ99877 126 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 HIST1H2BMQ99879 126 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 PLAC8Q9NZF1 115 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 GAGE2DQ9UEU5 116 aa3.86□□□□□ -1.79
RPA3-204ENST00000406109 TRAV12-1A0A0B4J245 112 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms