RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	IGLV1-50	A0A075B6I6	118 aa		4.09	□□□□□ -1.75
CEACAM1-208	ENST00000403461	LINC00959	A0A1B0GUT2	108 aa		4.09	□□□□□ -1.75
CEACAM1-208	ENST00000403461		I3L3M4	83 aa		4.09	□□□□□ -1.75
CEACAM1-208	ENST00000403461	BCL2L11	O43521	198 aa		4.09	□□□□□ -1.75
CEACAM1-208	ENST00000403461	CTRL	P40313	264 aa		4.09	□□□□□ -1.75
CEACAM1-208	ENST00000403461	SMAGP	Q0VAQ4	97 aa		4.09	□□□□□ -1.75
CEACAM1-208	ENST00000403461	LINC00526	Q96FQ7	95 aa		4.09	□□□□□ -1.75
CEACAM1-208	ENST00000403461	MRAP2	Q96G30	205 aa		4.09	□□□□□ -1.75
CEACAM1-208	ENST00000403461	GNG13	Q9P2W3	67 aa		4.09	□□□□□ -1.75
CEACAM1-208	ENST00000403461		A0A1B0GV90	55 aa		4.08	□□□□□ -1.76
CEACAM1-208	ENST00000403461	C19orf71	A6NCJ1	209 aa		4.08	□□□□□ -1.76
CEACAM1-208	ENST00000403461	SDHAF1	A6NFY7	115 aa		4.08	□□□□□ -1.76
CEACAM1-208	ENST00000403461	HMSD	A8MTL9	139 aa		4.08	□□□□□ -1.76
CEACAM1-208	ENST00000403461	TSTD3	H0UI37	97 aa		4.08	□□□□□ -1.76
CEACAM1-208	ENST00000403461	COX7A2L	O14548	114 aa		4.08	□□□□□ -1.76
CEACAM1-208	ENST00000403461	IGLV7-43	P04211	117 aa		4.08	□□□□□ -1.76
CEACAM1-208	ENST00000403461	C9orf116	Q5BN46	136 aa	Predicted RBP	4.08	□□□□□ -1.76
CEACAM1-208	ENST00000403461		Q8N377	158 aa		4.08	□□□□□ -1.76
CEACAM1-208	ENST00000403461	C9orf62	Q8N4C0	152 aa		4.08	□□□□□ -1.76
CEACAM1-208	ENST00000403461	GATD1	Q8NB37	220 aa		4.08	□□□□□ -1.76
CEACAM1-208	ENST00000403461	C11orf52	Q96A22	123 aa		4.08	□□□□□ -1.76
CEACAM1-208	ENST00000403461	IGLV4-3	A0A075B6K6	122 aa		4.07	□□□□□ -1.76
CEACAM1-208	ENST00000403461		A0A1W2PNN7	141 aa		4.07	□□□□□ -1.76
CEACAM1-208	ENST00000403461	C1orf196	B1AJZ1	125 aa		4.07	□□□□□ -1.76
CEACAM1-208	ENST00000403461		H0Y9J4	135 aa		4.07	□□□□□ -1.76
CEACAM1-208	ENST00000403461	PDE6D	O43924	150 aa		4.07	□□□□□ -1.76
CEACAM1-208	ENST00000403461	BCL2	P10415	239 aa		4.07	□□□□□ -1.76
CEACAM1-208	ENST00000403461	KRTAP10-5	P60370	271 aa		4.07	□□□□□ -1.76
CEACAM1-208	ENST00000403461	CCL20	P78556	96 aa		4.07	□□□□□ -1.76
CEACAM1-208	ENST00000403461	MRPL52	Q86TS9	123 aa	Known RBP	4.07	□□□□□ -1.76
CEACAM1-208	ENST00000403461	NUP35	Q8NFH5	326 aa		4.07	□□□□□ -1.76
CEACAM1-208	ENST00000403461	RPL39L	Q96EH5	51 aa	Known RBP	4.07	□□□□□ -1.76
CEACAM1-208	ENST00000403461	CNFN	Q9BYD5	112 aa		4.07	□□□□□ -1.76
CEACAM1-208	ENST00000403461	RPP21	Q9H633	154 aa	Known RBP	4.07	□□□□□ -1.76
CEACAM1-208	ENST00000403461	MUC2	Q02817	5179 aa		4.06	□□□□□ -1.76
CEACAM1-208	ENST00000403461	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.06	□□□□□ -1.76
CEACAM1-208	ENST00000403461	UBE2B	P63146	152 aa		4.06	□□□□□ -1.76
CEACAM1-208	ENST00000403461	MEF2B	Q02080	365 aa	Predicted RBP	4.06	□□□□□ -1.76
CEACAM1-208	ENST00000403461	SPAG11B	Q08648	103 aa		4.06	□□□□□ -1.76
CEACAM1-208	ENST00000403461	PHF5A	Q7RTV0	110 aa	Known RBP	4.06	□□□□□ -1.76
CEACAM1-208	ENST00000403461	TCTE3	Q8IZS6	198 aa		4.06	□□□□□ -1.76
CEACAM1-208	ENST00000403461	BORCS7	Q96B45	105 aa		4.06	□□□□□ -1.76
CEACAM1-208	ENST00000403461	IMMP2L	Q96T52	175 aa		4.06	□□□□□ -1.76
CEACAM1-208	ENST00000403461	ST20	Q9HBF5	79 aa		4.06	□□□□□ -1.76
CEACAM1-208	ENST00000403461	SPANXA1	Q9NS26	97 aa		4.06	□□□□□ -1.76
CEACAM1-208	ENST00000403461	MED9	Q9NWA0	146 aa		4.06	□□□□□ -1.76
CEACAM1-208	ENST00000403461	FAT4	Q6V0I7	4981 aa		4.05	□□□□□ -1.76
CEACAM1-208	ENST00000403461	TRBV6-5	A0A0K0K1A5	114 aa		4.05	□□□□□ -1.76
CEACAM1-208	ENST00000403461	C7orf77	A4D0Y5	90 aa		4.05	□□□□□ -1.76
CEACAM1-208	ENST00000403461	DLEU1	O43261	78 aa		4.05	□□□□□ -1.76
CEACAM1-208	ENST00000403461	ESD	P10768	282 aa		4.05	□□□□□ -1.76
CEACAM1-208	ENST00000403461	FCER1G	P30273	86 aa		4.05	□□□□□ -1.76
CEACAM1-208	ENST00000403461	KRTAP10-12	P60413	245 aa		4.05	□□□□□ -1.76
CEACAM1-208	ENST00000403461	CDC42SE2	Q9NRR3	84 aa		4.05	□□□□□ -1.76
CEACAM1-208	ENST00000403461	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.05	□□□□□ -1.76
CEACAM1-208	ENST00000403461	TMEM242	Q9NWH2	141 aa		4.05	□□□□□ -1.76
CEACAM1-208	ENST00000403461	TRAV13-1	A0A0B4J241	112 aa		4.04	□□□□□ -1.76
CEACAM1-208	ENST00000403461	NDUFA1	O15239	70 aa		4.04	□□□□□ -1.76
CEACAM1-208	ENST00000403461	FAM19A1	Q7Z5A9	133 aa		4.04	□□□□□ -1.76
CEACAM1-208	ENST00000403461	OR10D4P	Q8NGN7	298 aa		4.04	□□□□□ -1.76
CEACAM1-208	ENST00000403461	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.04	□□□□□ -1.76
CEACAM1-208	ENST00000403461	PPP1R17	O96001	155 aa		4.03	□□□□□ -1.76
CEACAM1-208	ENST00000403461	NDUFV3	P56181	108 aa	Known RBP	4.03	□□□□□ -1.76
CEACAM1-208	ENST00000403461	TMEM241	Q24JQ0	296 aa		4.03	□□□□□ -1.76
CEACAM1-208	ENST00000403461	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.03	□□□□□ -1.76
CEACAM1-208	ENST00000403461	C5orf38	Q86SI9	138 aa		4.03	□□□□□ -1.76
CEACAM1-208	ENST00000403461	KIR2DL4	Q99706	377 aa		4.03	□□□□□ -1.76
CEACAM1-208	ENST00000403461	OCR1	Q9BZK8	76 aa		4.03	□□□□□ -1.76
CEACAM1-208	ENST00000403461	RNASE7	Q9H1E1	156 aa	Known RBP	4.03	□□□□□ -1.76
CEACAM1-208	ENST00000403461	MRPL35	Q9NZE8	188 aa	Known RBP	4.03	□□□□□ -1.76
CEACAM1-208	ENST00000403461	TRBV27	A0A0K0K1C4	114 aa		4.02	□□□□□ -1.77
CEACAM1-208	ENST00000403461		A8MWL6	223 aa		4.02	□□□□□ -1.77
CEACAM1-208	ENST00000403461	FOXA3	P55318	350 aa	Predicted RBP	4.02	□□□□□ -1.77
CEACAM1-208	ENST00000403461	ORAOV1	Q8WV07	137 aa		4.02	□□□□□ -1.77
CEACAM1-208	ENST00000403461	PPDPF	Q9H3Y8	114 aa		4.02	□□□□□ -1.77
CEACAM1-208	ENST00000403461	LPA	P08519	4548 aa		4.02	□□□□□ -1.77
CEACAM1-208	ENST00000403461	TRBV20OR9-2	A0A075B6H5	130 aa		4.01	□□□□□ -1.77
CEACAM1-208	ENST00000403461	DSCR10	P59022	87 aa		4.01	□□□□□ -1.77
CEACAM1-208	ENST00000403461	ALKAL2	Q6UX46	152 aa		4.01	□□□□□ -1.77
CEACAM1-208	ENST00000403461	UBE2D4	Q9Y2X8	147 aa		4.01	□□□□□ -1.77
CEACAM1-208	ENST00000403461		A0A1B0GUT8	65 aa		4	□□□□□ -1.77
CEACAM1-208	ENST00000403461	FAM168B	A1KXE4	195 aa		4	□□□□□ -1.77
CEACAM1-208	ENST00000403461	KRTAP1-4	P0C5Y4	121 aa		4	□□□□□ -1.77
CEACAM1-208	ENST00000403461	TLX1NB	P0CAT3	122 aa		4	□□□□□ -1.77
CEACAM1-208	ENST00000403461	CD164	Q04900	197 aa		4	□□□□□ -1.77
CEACAM1-208	ENST00000403461	RNASE13	Q5GAN3	156 aa	Known RBP	4	□□□□□ -1.77
CEACAM1-208	ENST00000403461	C14orf144	Q96I85	54 aa		4	□□□□□ -1.77
CEACAM1-208	ENST00000403461	TMEM191A	Q9H0A3	160 aa		4	□□□□□ -1.77
CEACAM1-208	ENST00000403461	SMDT1	Q9H4I9	107 aa		4	□□□□□ -1.77
CEACAM1-208	ENST00000403461	TGIF2-C20orf24	A0A0A6YYL0	155 aa		3.99	□□□□□ -1.77
CEACAM1-208	ENST00000403461	TINCR	A0A1B0GVN0	87 aa		3.99	□□□□□ -1.77
CEACAM1-208	ENST00000403461	SMKR1	H3BMG3	65 aa		3.99	□□□□□ -1.77
CEACAM1-208	ENST00000403461	ZNF861P	O60384	105 aa		3.99	□□□□□ -1.77
CEACAM1-208	ENST00000403461	POLR2K	P53803	58 aa	Known RBP	3.99	□□□□□ -1.77
CEACAM1-208	ENST00000403461	HBB	P68871	147 aa		3.99	□□□□□ -1.77
CEACAM1-208	ENST00000403461		Q6ZUT4	128 aa		3.99	□□□□□ -1.77
CEACAM1-208	ENST00000403461	FAM231D	Q6ZW35	169 aa		3.99	□□□□□ -1.77
CEACAM1-208	ENST00000403461	TIMM21	Q9BVV7	248 aa		3.99	□□□□□ -1.77
CEACAM1-208	ENST00000403461	TRBV30	A0A0K0K1B3	111 aa		3.98	□□□□□ -1.77
CEACAM1-208	ENST00000403461	NUPR1	O60356	82 aa		3.98	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 107 ms