RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 RNASE1P07998 156 aaKnown RBP14.61□□□□□ -0.07
CTCF-202ENST00000401394 TRBV6-8A0A0A6YYG3 113 aa14.61□□□□□ -0.07
CTCF-202ENST00000401394 hADV29S1A0JD25 119 aa14.61□□□□□ -0.07
CTCF-202ENST00000401394 C9orf116Q5BN46 136 aaPredicted RBP14.6□□□□□ -0.07
CTCF-202ENST00000401394 FHL2Q14192 279 aa14.6□□□□□ -0.07
CTCF-202ENST00000401394 NOTCH2Q04721 2471 aa14.59□□□□□ -0.07
CTCF-202ENST00000401394 COPS9Q8WXC6 57 aa14.59□□□□□ -0.07
CTCF-202ENST00000401394 C6orf226Q5I0X4 101 aa14.59□□□□□ -0.07
CTCF-202ENST00000401394 IGLV10-54A0A075B6I4 117 aa14.58□□□□□ -0.07
CTCF-202ENST00000401394 CXCL5P42830 114 aa14.58□□□□□ -0.07
CTCF-202ENST00000401394 WFDC11Q8NEX6 87 aa14.58□□□□□ -0.07
CTCF-202ENST00000401394 IMUPQ9GZP8 106 aa14.58□□□□□ -0.07
CTCF-202ENST00000401394 C2orf48Q96LS8 159 aa14.58□□□□□ -0.08
CTCF-202ENST00000401394 SS18Q15532 418 aa14.58□□□□□ -0.08
CTCF-202ENST00000401394 INAFM2P0DMQ5 153 aa14.57□□□□□ -0.08
CTCF-202ENST00000401394 FAM222AQ5U5X8 452 aa14.57□□□□□ -0.08
CTCF-202ENST00000401394 DEFB4AO15263 64 aa14.57□□□□□ -0.08
CTCF-202ENST00000401394 HILS1P60008 231 aa14.57□□□□□ -0.08
CTCF-202ENST00000401394 LINC00959A0A1B0GUT2 108 aa14.56□□□□□ -0.08
CTCF-202ENST00000401394 LINC00526Q96FQ7 95 aa14.55□□□□□ -0.08
CTCF-202ENST00000401394 CSNK1G2-AS1Q8NCQ2 148 aa14.55□□□□□ -0.08
CTCF-202ENST00000401394 A0A087WZ39 114 aa14.54□□□□□ -0.08
CTCF-202ENST00000401394 Q8NDZ9 215 aa14.54□□□□□ -0.08
CTCF-202ENST00000401394 C19orf73Q9NVV2 129 aa14.54□□□□□ -0.08
CTCF-202ENST00000401394 TENM4Q6N022 2769 aa14.54□□□□□ -0.08
CTCF-202ENST00000401394 UQCRQO14949 82 aa14.54□□□□□ -0.08
CTCF-202ENST00000401394 DEFB113Q30KQ7 82 aa14.54□□□□□ -0.08
CTCF-202ENST00000401394 A0A1B0GX51 115 aa14.53□□□□□ -0.08
CTCF-202ENST00000401394 TRBV6-4A0A1B0GX49 114 aa14.53□□□□□ -0.08
CTCF-202ENST00000401394 LINC01561Q8N1V8 128 aa14.53□□□□□ -0.08
CTCF-202ENST00000401394 KRTAP1-3Q8IUG1 177 aa14.52□□□□□ -0.08
CTCF-202ENST00000401394 C16orf74Q96GX8 76 aa14.52□□□□□ -0.08
CTCF-202ENST00000401394 GYPEP15421 78 aa14.52□□□□□ -0.09
CTCF-202ENST00000401394 KIR2DL5BQ8NHK3 375 aa14.52□□□□□ -0.09
CTCF-202ENST00000401394 PF4P02776 101 aa14.51□□□□□ -0.09
CTCF-202ENST00000401394 HIST1H4AP62805 103 aaKnown RBP14.51□□□□□ -0.09
CTCF-202ENST00000401394 SPATA3Q8NHX4 192 aa14.51□□□□□ -0.09
CTCF-202ENST00000401394 COX7CP15954 63 aa14.51□□□□□ -0.09
CTCF-202ENST00000401394 NANOS2P60321 138 aaKnown RBP14.51□□□□□ -0.09
CTCF-202ENST00000401394 TRRAPQ9Y4A5 3859 aa14.5□□□□□ -0.09
CTCF-202ENST00000401394 IBA57-AS1B1ANH7 110 aa14.5□□□□□ -0.09
CTCF-202ENST00000401394 TMEM126AQ9H061 195 aa14.49□□□□□ -0.09
CTCF-202ENST00000401394 ANK3Q12955 4377 aaKnown RBP14.49□□□□□ -0.09
CTCF-202ENST00000401394 TENM1Q9UKZ4 2725 aa14.49□□□□□ -0.09
CTCF-202ENST00000401394 LINC01006Q8NI28 216 aa14.48□□□□□ -0.09
CTCF-202ENST00000401394 TRAV25A0A0B4J276 109 aa14.47□□□□□ -0.09
CTCF-202ENST00000401394 FAM19A1Q7Z5A9 133 aa14.46□□□□□ -0.1
CTCF-202ENST00000401394 LINC00269Q8N2A0 174 aa14.46□□□□□ -0.1
CTCF-202ENST00000401394 H0YGX0 51 aa14.45□□□□□ -0.1
CTCF-202ENST00000401394 OBSCN-AS1Q96MR7 158 aa14.45□□□□□ -0.1
CTCF-202ENST00000401394 OVOL2Q9BRP0 275 aa14.44□□□□□ -0.1
CTCF-202ENST00000401394 M0R2N4 97 aa14.43□□□□□ -0.1
CTCF-202ENST00000401394 RPL18AQ02543 176 aaKnown RBP14.43□□□□□ -0.1
CTCF-202ENST00000401394 ORMDL1Q9P0S3 153 aa14.43□□□□□ -0.1
CTCF-202ENST00000401394 C6orf223Q8N319 242 aa14.43□□□□□ -0.1
CTCF-202ENST00000401394 LINC00482Q8N8I6 264 aa14.42□□□□□ -0.1
CTCF-202ENST00000401394 TRAV23DV6A0A075B6W5 121 aa14.42□□□□□ -0.1
CTCF-202ENST00000401394 USP17L23D6RBM5 183 aa14.42□□□□□ -0.1
CTCF-202ENST00000401394 FASNP49327 2511 aaKnown RBP14.42□□□□□ -0.1
CTCF-202ENST00000401394 IGLV1-51P01701 117 aa14.41□□□□□ -0.1
CTCF-202ENST00000401394 PKD1L1Q8TDX9 2849 aa14.41□□□□□ -0.1
CTCF-202ENST00000401394 DSCR8Q96T75 97 aa14.41□□□□□ -0.1
CTCF-202ENST00000401394 PDZD2O15018 2839 aa14.41□□□□□ -0.1
CTCF-202ENST00000401394 C10orf25Q5T742 122 aa14.4□□□□□ -0.1
CTCF-202ENST00000401394 UNC79Q9P2D8 2635 aa14.39□□□□□ -0.11
CTCF-202ENST00000401394 ATOX1O00244 68 aa14.39□□□□□ -0.11
CTCF-202ENST00000401394 C6orf99Q4VX62 202 aa14.39□□□□□ -0.11
CTCF-202ENST00000401394 ENHOQ6UWT2 76 aa14.39□□□□□ -0.11
CTCF-202ENST00000401394 Q8N814 137 aa14.39□□□□□ -0.11
CTCF-202ENST00000401394 Q6JHZ5 121 aa14.37□□□□□ -0.11
CTCF-202ENST00000401394 FAM19A5Q7Z5A7 132 aaPredicted RBP14.37□□□□□ -0.11
CTCF-202ENST00000401394 LY6G6DO95868 133 aa14.37□□□□□ -0.11
CTCF-202ENST00000401394 HELZ2Q9BYK8 2649 aaKnown RBP14.37□□□□□ -0.11
CTCF-202ENST00000401394 OXTP01178 125 aa14.37□□□□□ -0.11
CTCF-202ENST00000401394 CRYGAP11844 174 aa14.36□□□□□ -0.11
CTCF-202ENST00000401394 CCKP06307 115 aa14.36□□□□□ -0.11
CTCF-202ENST00000401394 KIAA0087Q14695 138 aa14.36□□□□□ -0.11
CTCF-202ENST00000401394 TMEM86BQ8N661 226 aa14.36□□□□□ -0.11
CTCF-202ENST00000401394 ANGP03950 147 aaKnown RBP14.35□□□□□ -0.11
CTCF-202ENST00000401394 HIVEP1P15822 2718 aa14.35□□□□□ -0.11
CTCF-202ENST00000401394 TEP1Q99973 2627 aaKnown RBP14.34□□□□□ -0.11
CTCF-202ENST00000401394 CHCHD10Q8WYQ3 142 aaPredicted RBP14.34□□□□□ -0.11
CTCF-202ENST00000401394 UPK3BQ9BT76 320 aa14.34□□□□□ -0.11
CTCF-202ENST00000401394 ATRQ13535 2644 aa14.34□□□□□ -0.11
CTCF-202ENST00000401394 UNQ6190/PRO20217Q6UXQ8 127 aa14.33□□□□□ -0.12
CTCF-202ENST00000401394 SMR3AQ99954 134 aa14.33□□□□□ -0.12
CTCF-202ENST00000401394 Q8IZM0 81 aa14.32□□□□□ -0.12
CTCF-202ENST00000401394 SERP2Q8N6R1 65 aa14.31□□□□□ -0.12
CTCF-202ENST00000401394 KRTAP10-3P60369 221 aa14.31□□□□□ -0.12
CTCF-202ENST00000401394 X6R8D5 127 aa14.31□□□□□ -0.12
CTCF-202ENST00000401394 OTOGQ6ZRI0 2925 aa14.3□□□□□ -0.12
CTCF-202ENST00000401394 HECTD1Q9ULT8 2610 aa14.29□□□□□ -0.12
CTCF-202ENST00000401394 HTN3P15516 51 aa14.29□□□□□ -0.12
CTCF-202ENST00000401394 DEFB135Q30KP9 77 aa14.29□□□□□ -0.12
CTCF-202ENST00000401394 GHRHP01286 108 aa14.28□□□□□ -0.12
CTCF-202ENST00000401394 REG3AQ06141 175 aa14.28□□□□□ -0.12
CTCF-202ENST00000401394 S100A7L2Q5SY68 101 aa14.27□□□□□ -0.13
CTCF-202ENST00000401394 XAGE1AQ9HD64 81 aa14.26□□□□□ -0.13
CTCF-202ENST00000401394 J3KT08 172 aa14.26□□□□□ -0.13
CTCF-202ENST00000401394 KRTAP1-1Q07627 177 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms