RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 CRYGAP11844 174 aa8.53□□□□□ -1.04
VAMP1-203ENST00000400911 IFI27P40305 119 aaPredicted RBP8.53□□□□□ -1.04
VAMP1-203ENST00000400911 LBHQ53QV2 105 aaPredicted RBP8.53□□□□□ -1.04
VAMP1-203ENST00000400911 XAGE1AQ9HD64 81 aa8.53□□□□□ -1.04
VAMP1-203ENST00000400911 IGLV4-3A0A075B6K6 122 aa8.52□□□□□ -1.05
VAMP1-203ENST00000400911 A0A1B0GXF2 115 aa8.52□□□□□ -1.05
VAMP1-203ENST00000400911 RETNLBQ9BQ08 111 aa8.52□□□□□ -1.05
VAMP1-203ENST00000400911 GNB1LQ9BYB4 327 aa8.52□□□□□ -1.05
VAMP1-203ENST00000400911 ANAPC11Q9NYG5 84 aa8.52□□□□□ -1.05
VAMP1-203ENST00000400911 SCO1O75880 301 aa8.51□□□□□ -1.05
VAMP1-203ENST00000400911 RAB5AP20339 215 aa8.51□□□□□ -1.05
VAMP1-203ENST00000400911 RPL28P46779 137 aaKnown RBP8.51□□□□□ -1.05
VAMP1-203ENST00000400911 TMEM141Q96I45 108 aa8.51□□□□□ -1.05
VAMP1-203ENST00000400911 PYGO1Q9Y3Y4 419 aa8.51□□□□□ -1.05
VAMP1-203ENST00000400911 BCE1O60756 84 aa8.5□□□□□ -1.05
VAMP1-203ENST00000400911 PPBPP02775 128 aa8.5□□□□□ -1.05
VAMP1-203ENST00000400911 PRSS2P07478 247 aa8.5□□□□□ -1.05
VAMP1-203ENST00000400911 CKS1BP61024 79 aa8.5□□□□□ -1.05
VAMP1-203ENST00000400911 ZC2HC1BQ5TFG8 222 aa8.5□□□□□ -1.05
VAMP1-203ENST00000400911 LINC01561Q8N1V8 128 aa8.5□□□□□ -1.05
VAMP1-203ENST00000400911 TOMM7Q9P0U1 55 aa8.5□□□□□ -1.05
VAMP1-203ENST00000400911 TRAPPC1Q9Y5R8 145 aa8.5□□□□□ -1.05
VAMP1-203ENST00000400911 FABP9Q0Z7S8 132 aa8.49□□□□□ -1.05
VAMP1-203ENST00000400911 C6orf226Q5I0X4 101 aa8.49□□□□□ -1.05
VAMP1-203ENST00000400911 TMEM136Q6ZRR5 245 aa8.49□□□□□ -1.05
VAMP1-203ENST00000400911 MRPL55Q7Z7F7 128 aaKnown RBP8.49□□□□□ -1.05
VAMP1-203ENST00000400911 Q6ZN92 141 aa8.48□□□□□ -1.05
VAMP1-203ENST00000400911 TEX43Q6ZNM6 134 aa8.48□□□□□ -1.05
VAMP1-203ENST00000400911 MRPL18Q9H0U6 180 aaKnown RBP8.48□□□□□ -1.05
VAMP1-203ENST00000400911 CDIP1Q9H305 208 aa8.48□□□□□ -1.05
VAMP1-203ENST00000400911 RPL37AP8A6NKH3 93 aa8.47□□□□□ -1.05
VAMP1-203ENST00000400911 KRTAP13-2Q52LG2 175 aa8.47□□□□□ -1.05
VAMP1-203ENST00000400911 ORMDL3Q8N138 153 aa8.47□□□□□ -1.05
VAMP1-203ENST00000400911 C2orf88Q9BSF0 95 aa8.47□□□□□ -1.05
VAMP1-203ENST00000400911 ALKBH7Q9BT30 221 aaPredicted RBP8.47□□□□□ -1.05
VAMP1-203ENST00000400911 TP73-AS1Q9UF72 201 aa8.47□□□□□ -1.05
VAMP1-203ENST00000400911 COLCA2A8K830 154 aa8.46□□□□□ -1.06
VAMP1-203ENST00000400911 PRELID3AQ96N28 172 aa8.46□□□□□ -1.06
VAMP1-203ENST00000400911 YPEL4Q96NS1 127 aa8.46□□□□□ -1.06
VAMP1-203ENST00000400911 LOC389332A0A1B0GUA5 103 aa8.45□□□□□ -1.06
VAMP1-203ENST00000400911 TPRXLQ17RH7 258 aa8.45□□□□□ -1.06
VAMP1-203ENST00000400911 LINC00173Q6ZV60 143 aa8.45□□□□□ -1.06
VAMP1-203ENST00000400911 Q8IZM0 81 aa8.45□□□□□ -1.06
VAMP1-203ENST00000400911 LINC00167Q96N53 147 aa8.45□□□□□ -1.06
VAMP1-203ENST00000400911 LAMTOR2Q9Y2Q5 125 aa8.45□□□□□ -1.06
VAMP1-203ENST00000400911 IGLV7-46A0A075B6I9 117 aa8.44□□□□□ -1.06
VAMP1-203ENST00000400911 KIAA1644Q3SXP7 199 aa8.44□□□□□ -1.06
VAMP1-203ENST00000400911 LINC00304Q8N9R0 145 aa8.44□□□□□ -1.06
VAMP1-203ENST00000400911 AMELXQ99217 191 aa8.44□□□□□ -1.06
VAMP1-203ENST00000400911 VCX2Q9H322 139 aa8.44□□□□□ -1.06
VAMP1-203ENST00000400911 GAGE10A6NGK3 116 aa8.43□□□□□ -1.06
VAMP1-203ENST00000400911 F8VRH5 84 aa8.43□□□□□ -1.06
VAMP1-203ENST00000400911 MAP1LC3AQ9H492 121 aa8.43□□□□□ -1.06
VAMP1-203ENST00000400911 C2orf66Q6UXQ4 117 aa8.42□□□□□ -1.06
VAMP1-203ENST00000400911 CYSLTR1Q9Y271 337 aa8.42□□□□□ -1.06
VAMP1-203ENST00000400911 PRSS47A8MTI9 375 aa8.41□□□□□ -1.06
VAMP1-203ENST00000400911 TRGC2P03986 189 aa8.41□□□□□ -1.06
VAMP1-203ENST00000400911 UBE2AP49459 152 aa8.41□□□□□ -1.06
VAMP1-203ENST00000400911 KRTAP13-1Q8IUC0 172 aa8.41□□□□□ -1.06
VAMP1-203ENST00000400911 CDKN2A-AS1Q9UH64 79 aa8.41□□□□□ -1.06
VAMP1-203ENST00000400911 IGIPA6NJ69 53 aa8.4□□□□□ -1.06
VAMP1-203ENST00000400911 FAM229BQ4G0N7 80 aa8.4□□□□□ -1.06
VAMP1-203ENST00000400911 FAM19A3Q7Z5A8 133 aa8.4□□□□□ -1.06
VAMP1-203ENST00000400911 IGKV2D-26A0A0A0MRZ7 120 aa8.39□□□□□ -1.07
VAMP1-203ENST00000400911 NXT2Q9NPJ8 142 aaKnown RBP8.39□□□□□ -1.07
VAMP1-203ENST00000400911 RAB5BP61020 215 aa8.38□□□□□ -1.07
VAMP1-203ENST00000400911 HERVK_113P63121 156 aa8.38□□□□□ -1.07
VAMP1-203ENST00000400911 Q8N8P6 123 aa8.38□□□□□ -1.07
VAMP1-203ENST00000400911 NPSP0C0P6 89 aa8.37□□□□□ -1.07
VAMP1-203ENST00000400911 SEC11AP67812 179 aa8.37□□□□□ -1.07
VAMP1-203ENST00000400911 FA2HQ7L5A8 372 aa8.37□□□□□ -1.07
VAMP1-203ENST00000400911 PPDPFQ9H3Y8 114 aa8.37□□□□□ -1.07
VAMP1-203ENST00000400911 GEMIN7Q9H840 131 aaKnown RBP8.37□□□□□ -1.07
VAMP1-203ENST00000400911 G0S2P27469 103 aa8.36□□□□□ -1.07
VAMP1-203ENST00000400911 CXCL5P42830 114 aa8.36□□□□□ -1.07
VAMP1-203ENST00000400911 ORMDL2Q53FV1 153 aa8.36□□□□□ -1.07
VAMP1-203ENST00000400911 BAGE3Q86Y29 109 aa8.36□□□□□ -1.07
VAMP1-203ENST00000400911 IGLV5-37A0A075B6J1 123 aa8.35□□□□□ -1.07
VAMP1-203ENST00000400911 IGKV2-28A0A075B6P5 120 aa8.35□□□□□ -1.07
VAMP1-203ENST00000400911 K7EMI3 77 aa8.35□□□□□ -1.07
VAMP1-203ENST00000400911 IGKV2D-28P01615 120 aa8.35□□□□□ -1.07
VAMP1-203ENST00000400911 NKAPP1Q8N9T2 125 aa8.35□□□□□ -1.07
VAMP1-203ENST00000400911 SMIM1B2RUZ4 78 aa8.34□□□□□ -1.07
VAMP1-203ENST00000400911 C18orf32Q8TCD1 76 aa8.34□□□□□ -1.07
VAMP1-203ENST00000400911 LINC00614P0C842 121 aa8.33□□□□□ -1.08
VAMP1-203ENST00000400911 CTAG1AP78358 180 aa8.33□□□□□ -1.08
VAMP1-203ENST00000400911 PRLHP81277 87 aa8.33□□□□□ -1.08
VAMP1-203ENST00000400911 PAPPA-AS1Q5QFB9 102 aa8.33□□□□□ -1.08
VAMP1-203ENST00000400911 COX7B2Q8TF08 81 aa8.33□□□□□ -1.08
VAMP1-203ENST00000400911 FSIP2Q5CZC0 6907 aa8.31□□□□□ -1.08
VAMP1-203ENST00000400911 PDZD11Q5EBL8 140 aa8.31□□□□□ -1.08
VAMP1-203ENST00000400911 C3orf22Q8N5N4 141 aa8.31□□□□□ -1.08
VAMP1-203ENST00000400911 CHCHD1Q96BP2 118 aaKnown RBP8.31□□□□□ -1.08
VAMP1-203ENST00000400911 LINC01549A6NIU2 74 aa8.3□□□□□ -1.08
VAMP1-203ENST00000400911 TMEM238C9JI98 176 aa8.3□□□□□ -1.08
VAMP1-203ENST00000400911 HIST1H2BKO60814 126 aa8.3□□□□□ -1.08
VAMP1-203ENST00000400911 HSBP1O75506 76 aa8.3□□□□□ -1.08
VAMP1-203ENST00000400911 HIST1H2BJP06899 126 aa8.3□□□□□ -1.08
VAMP1-203ENST00000400911 HIST1H2BOP23527 126 aa8.3□□□□□ -1.08
VAMP1-203ENST00000400911 HIST1H2BBP33778 126 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms