RNA–Protein interactions for RNA: ENST00000399808.4

IFITM3-201, Transcript of interferon induced transmembrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene IFITM3, Length 808 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3-201ENST00000399808 LINC00469Q8N7U9 141 aa8.65□□□□□ -1.02
IFITM3-201ENST00000399808 LINC00304Q8N9R0 145 aa8.65□□□□□ -1.02
IFITM3-201ENST00000399808 KRTAP4-1Q9BYQ7 146 aa8.65□□□□□ -1.02
IFITM3-201ENST00000399808 TRAPPC1Q9Y5R8 145 aa8.65□□□□□ -1.02
IFITM3-201ENST00000399808 IFITM10A6NMD0 228 aa8.64□□□□□ -1.03
IFITM3-201ENST00000399808 BCE1O60756 84 aa8.64□□□□□ -1.03
IFITM3-201ENST00000399808 PPP1R17O96001 155 aa8.64□□□□□ -1.03
IFITM3-201ENST00000399808 LINC01547P58512 204 aaPredicted RBP8.64□□□□□ -1.03
IFITM3-201ENST00000399808 TMEM136Q6ZRR5 245 aa8.64□□□□□ -1.03
IFITM3-201ENST00000399808 PACRGQ96M98 296 aaPredicted RBP8.64□□□□□ -1.03
IFITM3-201ENST00000399808 SPANXA1Q9NS26 97 aa8.64□□□□□ -1.03
IFITM3-201ENST00000399808 MRPL51Q4U2R6 128 aaKnown RBP8.63□□□□□ -1.03
IFITM3-201ENST00000399808 XAGE1AQ9HD64 81 aa8.63□□□□□ -1.03
IFITM3-201ENST00000399808 LBHQ53QV2 105 aaPredicted RBP8.62□□□□□ -1.03
IFITM3-201ENST00000399808 MRPL18Q9H0U6 180 aaKnown RBP8.62□□□□□ -1.03
IFITM3-201ENST00000399808 PPDPFQ9H3Y8 114 aa8.62□□□□□ -1.03
IFITM3-201ENST00000399808 RPL32P62910 135 aaKnown RBP8.61□□□□□ -1.03
IFITM3-201ENST00000399808 FABP9Q0Z7S8 132 aa8.61□□□□□ -1.03
IFITM3-201ENST00000399808 C20orf78Q9BR46 151 aa8.61□□□□□ -1.03
IFITM3-201ENST00000399808 TRGC2P03986 189 aa8.6□□□□□ -1.03
IFITM3-201ENST00000399808 RAB5BP61020 215 aa8.6□□□□□ -1.03
IFITM3-201ENST00000399808 FAM104BQ5XKR9 115 aa8.6□□□□□ -1.03
IFITM3-201ENST00000399808 MRPL55Q7Z7F7 128 aaKnown RBP8.6□□□□□ -1.03
IFITM3-201ENST00000399808 KRTAP13-1Q8IUC0 172 aa8.6□□□□□ -1.03
IFITM3-201ENST00000399808 TP73-AS1Q9UF72 201 aa8.6□□□□□ -1.03
IFITM3-201ENST00000399808 FAM229BQ4G0N7 80 aa8.59□□□□□ -1.03
IFITM3-201ENST00000399808 RPL37AP8A6NKH3 93 aa8.58□□□□□ -1.04
IFITM3-201ENST00000399808 TCAPO15273 167 aa8.58□□□□□ -1.04
IFITM3-201ENST00000399808 PPBPP02775 128 aa8.58□□□□□ -1.04
IFITM3-201ENST00000399808 LINC00167Q96N53 147 aa8.58□□□□□ -1.04
IFITM3-201ENST00000399808 TNFRSF6BO95407 300 aa8.57□□□□□ -1.04
IFITM3-201ENST00000399808 ASB16-AS1Q495Z4 193 aa8.57□□□□□ -1.04
IFITM3-201ENST00000399808 LINC01561Q8N1V8 128 aa8.57□□□□□ -1.04
IFITM3-201ENST00000399808 SMIM2Q9BVW6 85 aa8.57□□□□□ -1.04
IFITM3-201ENST00000399808 IGLV4-3A0A075B6K6 122 aa8.56□□□□□ -1.04
IFITM3-201ENST00000399808 CKS2P33552 79 aa8.56□□□□□ -1.04
IFITM3-201ENST00000399808 CTAG1AP78358 180 aa8.56□□□□□ -1.04
IFITM3-201ENST00000399808 ORMDL3Q8N138 153 aa8.56□□□□□ -1.04
IFITM3-201ENST00000399808 LAMTOR2Q9Y2Q5 125 aa8.56□□□□□ -1.04
IFITM3-201ENST00000399808 KIAA1644Q3SXP7 199 aa8.55□□□□□ -1.04
IFITM3-201ENST00000399808 PYGO1Q9Y3Y4 419 aa8.55□□□□□ -1.04
IFITM3-201ENST00000399808 D6R8Y8 96 aa8.54□□□□□ -1.04
IFITM3-201ENST00000399808 ZC2HC1BQ5TFG8 222 aa8.54□□□□□ -1.04
IFITM3-201ENST00000399808 PRELID3AQ96N28 172 aa8.54□□□□□ -1.04
IFITM3-201ENST00000399808 ALKBH7Q9BT30 221 aaPredicted RBP8.54□□□□□ -1.04
IFITM3-201ENST00000399808 TOMM7Q9P0U1 55 aa8.54□□□□□ -1.04
IFITM3-201ENST00000399808 IGKV2D-26A0A0A0MRZ7 120 aa8.53□□□□□ -1.04
IFITM3-201ENST00000399808 HIST1H2BKO60814 126 aa8.53□□□□□ -1.04
IFITM3-201ENST00000399808 NPYP01303 97 aa8.53□□□□□ -1.04
IFITM3-201ENST00000399808 HIST1H2BJP06899 126 aa8.53□□□□□ -1.04
IFITM3-201ENST00000399808 HIST1H2BOP23527 126 aa8.53□□□□□ -1.04
IFITM3-201ENST00000399808 HIST1H2BBP33778 126 aa8.53□□□□□ -1.04
IFITM3-201ENST00000399808 HIST1H2BDP58876 126 aa8.53□□□□□ -1.04
IFITM3-201ENST00000399808 CKS1BP61024 79 aa8.53□□□□□ -1.04
IFITM3-201ENST00000399808 HIST1H2BCP62807 126 aa8.53□□□□□ -1.04
IFITM3-201ENST00000399808 HIST2H2BEQ16778 126 aa8.53□□□□□ -1.04
IFITM3-201ENST00000399808 KRTAP13-3Q3SY46 172 aa8.53□□□□□ -1.04
IFITM3-201ENST00000399808 C6orf226Q5I0X4 101 aa8.53□□□□□ -1.04
IFITM3-201ENST00000399808 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.53□□□□□ -1.04
IFITM3-201ENST00000399808 LCE2CQ5TA81 110 aa8.53□□□□□ -1.04
IFITM3-201ENST00000399808 HIST1H2BHQ93079 126 aa8.53□□□□□ -1.04
IFITM3-201ENST00000399808 HIST1H2BNQ99877 126 aa8.53□□□□□ -1.04
IFITM3-201ENST00000399808 HIST1H2BMQ99879 126 aa8.53□□□□□ -1.04
IFITM3-201ENST00000399808 GAGE10A6NGK3 116 aa8.52□□□□□ -1.05
IFITM3-201ENST00000399808 S100A6P06703 90 aa8.52□□□□□ -1.05
IFITM3-201ENST00000399808 PRSS2P07478 247 aa8.52□□□□□ -1.05
IFITM3-201ENST00000399808 IFI27P40305 119 aaPredicted RBP8.52□□□□□ -1.05
IFITM3-201ENST00000399808 Q6ZN92 141 aa8.52□□□□□ -1.05
IFITM3-201ENST00000399808 Q8IZM0 81 aa8.52□□□□□ -1.05
IFITM3-201ENST00000399808 TMA7Q9Y2S6 64 aaKnown RBP8.52□□□□□ -1.05
IFITM3-201ENST00000399808 UBE2AP49459 152 aa8.51□□□□□ -1.05
IFITM3-201ENST00000399808 C3orf22Q8N5N4 141 aa8.51□□□□□ -1.05
IFITM3-201ENST00000399808 TMEM141Q96I45 108 aa8.51□□□□□ -1.05
IFITM3-201ENST00000399808 MAP1LC3AQ9H492 121 aa8.51□□□□□ -1.05
IFITM3-201ENST00000399808 C18orf32Q8TCD1 76 aa8.5□□□□□ -1.05
IFITM3-201ENST00000399808 TEX43Q6ZNM6 134 aa8.49□□□□□ -1.05
IFITM3-201ENST00000399808 BAGE3Q86Y29 109 aa8.49□□□□□ -1.05
IFITM3-201ENST00000399808 LINC00337Q8N6G1 96 aa8.49□□□□□ -1.05
IFITM3-201ENST00000399808 PRSS47A8MTI9 375 aa8.48□□□□□ -1.05
IFITM3-201ENST00000399808 F8VRH5 84 aa8.48□□□□□ -1.05
IFITM3-201ENST00000399808 NDUFA6P56556 154 aa8.48□□□□□ -1.05
IFITM3-201ENST00000399808 FP248Q71RG6 208 aaPredicted RBP8.48□□□□□ -1.05
IFITM3-201ENST00000399808 AMELXQ99217 191 aa8.48□□□□□ -1.05
IFITM3-201ENST00000399808 IGLV5-37A0A075B6J1 123 aa8.47□□□□□ -1.05
IFITM3-201ENST00000399808 COA6Q5JTJ3 125 aaKnown RBP8.47□□□□□ -1.05
IFITM3-201ENST00000399808 NXT2Q9NPJ8 142 aaKnown RBP8.47□□□□□ -1.05
IFITM3-201ENST00000399808 PRLHP81277 87 aa8.46□□□□□ -1.06
IFITM3-201ENST00000399808 C2orf66Q6UXQ4 117 aa8.46□□□□□ -1.06
IFITM3-201ENST00000399808 FA2HQ7L5A8 372 aa8.46□□□□□ -1.06
IFITM3-201ENST00000399808 FAM19A3Q7Z5A8 133 aa8.46□□□□□ -1.06
IFITM3-201ENST00000399808 CHCHD1Q96BP2 118 aaKnown RBP8.46□□□□□ -1.06
IFITM3-201ENST00000399808 K7EMI3 77 aa8.45□□□□□ -1.06
IFITM3-201ENST00000399808 KRTAP19-2Q3LHN2 52 aa8.45□□□□□ -1.06
IFITM3-201ENST00000399808 Q8N8P6 123 aa8.45□□□□□ -1.06
IFITM3-201ENST00000399808 PLEKHB2Q96CS7 222 aa8.45□□□□□ -1.06
IFITM3-201ENST00000399808 CDKN2A-AS1Q9UH64 79 aa8.45□□□□□ -1.06
IFITM3-201ENST00000399808 IGKV2-28A0A075B6P5 120 aa8.44□□□□□ -1.06
IFITM3-201ENST00000399808 LOC389332A0A1B0GUA5 103 aa8.44□□□□□ -1.06
IFITM3-201ENST00000399808 SERF1AO75920 110 aa8.44□□□□□ -1.06
IFITM3-201ENST00000399808 IGKV2D-28P01615 120 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms