RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 MIR22HGQ0VDD5 57 aa6.33□□□□□ -1.4
CACNA1C-220ENST00000399655 M0QY20 66 aa6.32□□□□□ -1.4
CACNA1C-220ENST00000399655 PINLYPA6NC86 204 aa6.32□□□□□ -1.4
CACNA1C-220ENST00000399655 IGLV8-61A0A075B6I0 122 aa6.32□□□□□ -1.4
CACNA1C-220ENST00000399655 A0A087WSZ3 146 aa6.32□□□□□ -1.4
CACNA1C-220ENST00000399655 C9orf116Q5BN46 136 aaPredicted RBP6.32□□□□□ -1.4
CACNA1C-220ENST00000399655 CRIP2P52943 208 aaPredicted RBP6.32□□□□□ -1.4
CACNA1C-220ENST00000399655 APLNQ9ULZ1 77 aa6.32□□□□□ -1.4
CACNA1C-220ENST00000399655 KPRPQ5T749 579 aaPredicted RBP6.31□□□□□ -1.4
CACNA1C-220ENST00000399655 Q6ZTI0 123 aa6.31□□□□□ -1.4
CACNA1C-220ENST00000399655 Q6ZR03 302 aa6.31□□□□□ -1.4
CACNA1C-220ENST00000399655 C4orf26Q17RF5 130 aa6.31□□□□□ -1.4
CACNA1C-220ENST00000399655 IGFL3Q6UXB1 125 aa6.31□□□□□ -1.4
CACNA1C-220ENST00000399655 NUPR1O60356 82 aa6.3□□□□□ -1.4
CACNA1C-220ENST00000399655 AVPP01185 164 aa6.3□□□□□ -1.4
CACNA1C-220ENST00000399655 RITA1Q96K30 269 aa6.3□□□□□ -1.4
CACNA1C-220ENST00000399655 IGLV1-44P01699 117 aa6.3□□□□□ -1.4
CACNA1C-220ENST00000399655 RSPO1Q2MKA7 263 aaPredicted RBP6.29□□□□□ -1.4
CACNA1C-220ENST00000399655 STAB1Q9NY15 2570 aa6.29□□□□□ -1.4
CACNA1C-220ENST00000399655 LINC01556Q5JQF7 62 aa6.28□□□□□ -1.4
CACNA1C-220ENST00000399655 C9orf129Q5T035 196 aaKnown RBP6.28□□□□□ -1.4
CACNA1C-220ENST00000399655 LY6G6DO95868 133 aa6.28□□□□□ -1.4
CACNA1C-220ENST00000399655 LYPD5Q6UWN5 251 aa6.28□□□□□ -1.4
CACNA1C-220ENST00000399655 LINC00482Q8N8I6 264 aa6.28□□□□□ -1.4
CACNA1C-220ENST00000399655 UNQ9165/PRO28630Q6UXU0 137 aa6.28□□□□□ -1.4
CACNA1C-220ENST00000399655 MOBPQ13875 183 aa6.28□□□□□ -1.4
CACNA1C-220ENST00000399655 LINC00959A0A1B0GUT2 108 aa6.28□□□□□ -1.4
CACNA1C-220ENST00000399655 ODF3BA8MYP8 253 aa6.27□□□□□ -1.4
CACNA1C-220ENST00000399655 LY6G6CO95867 125 aa6.27□□□□□ -1.41
CACNA1C-220ENST00000399655 TMEM105Q8N8V8 129 aa6.27□□□□□ -1.41
CACNA1C-220ENST00000399655 IGF2RP11717 2491 aa6.27□□□□□ -1.41
CACNA1C-220ENST00000399655 LINC00313P59037 77 aa6.27□□□□□ -1.41
CACNA1C-220ENST00000399655 C1orf134Q5TEV5 83 aa6.27□□□□□ -1.41
CACNA1C-220ENST00000399655 SHISA2Q6UWI4 295 aa6.27□□□□□ -1.41
CACNA1C-220ENST00000399655 LINC01561Q8N1V8 128 aa6.26□□□□□ -1.41
CACNA1C-220ENST00000399655 B3GALT5-AS1P59052 145 aa6.26□□□□□ -1.41
CACNA1C-220ENST00000399655 SMIM29Q86T20 159 aa6.26□□□□□ -1.41
CACNA1C-220ENST00000399655 FAM229AH3BQW9 127 aa6.26□□□□□ -1.41
CACNA1C-220ENST00000399655 Q9UF83 564 aa6.25□□□□□ -1.41
CACNA1C-220ENST00000399655 PRAC2D3DTV9 90 aa6.25□□□□□ -1.41
CACNA1C-220ENST00000399655 ITGBL1O95965 494 aaPredicted RBP6.24□□□□□ -1.41
CACNA1C-220ENST00000399655 C2orf91Q6ZV80 131 aa6.24□□□□□ -1.41
CACNA1C-220ENST00000399655 BAHCC1Q9P281 2608 aa6.24□□□□□ -1.41
CACNA1C-220ENST00000399655 MAPKAPK5-AS1Q8N8E1 139 aa6.24□□□□□ -1.41
CACNA1C-220ENST00000399655 Q1T7F1 81 aa6.24□□□□□ -1.41
CACNA1C-220ENST00000399655 PRO3102Q9H379 93 aa6.24□□□□□ -1.41
CACNA1C-220ENST00000399655 FSTL3O95633 263 aa6.23□□□□□ -1.41
CACNA1C-220ENST00000399655 TSHBP01222 138 aa6.23□□□□□ -1.41
CACNA1C-220ENST00000399655 A0A087WYN8 130 aa6.23□□□□□ -1.41
CACNA1C-220ENST00000399655 ZNF581Q9P0T4 197 aa6.23□□□□□ -1.41
CACNA1C-220ENST00000399655 Q6ZQT0 140 aa6.22□□□□□ -1.41
CACNA1C-220ENST00000399655 PLA2G2DQ9UNK4 145 aa6.22□□□□□ -1.41
CACNA1C-220ENST00000399655 CSRP3P50461 194 aa6.22□□□□□ -1.41
CACNA1C-220ENST00000399655 IGLV2-18A0A075B6J9 118 aa6.21□□□□□ -1.41
CACNA1C-220ENST00000399655 K7EQG2 157 aa6.21□□□□□ -1.41
CACNA1C-220ENST00000399655 C11orf72Q8NBR9 251 aa6.21□□□□□ -1.41
CACNA1C-220ENST00000399655 IGLV2-14P01704 120 aa6.21□□□□□ -1.42
CACNA1C-220ENST00000399655 DEFB114Q30KQ6 69 aa6.21□□□□□ -1.42
CACNA1C-220ENST00000399655 COX6B2Q6YFQ2 88 aa6.21□□□□□ -1.42
CACNA1C-220ENST00000399655 CDC42SE2Q9NRR3 84 aa6.21□□□□□ -1.42
CACNA1C-220ENST00000399655 TM2D3Q9BRN9 247 aa6.2□□□□□ -1.42
CACNA1C-220ENST00000399655 DMAC1Q96GE9 116 aa6.2□□□□□ -1.42
CACNA1C-220ENST00000399655 ZFP36P26651 326 aaKnown RBP6.2□□□□□ -1.42
CACNA1C-220ENST00000399655 LINC00846Q9NV44 126 aa6.2□□□□□ -1.42
CACNA1C-220ENST00000399655 M0R2N4 97 aa6.2□□□□□ -1.42
CACNA1C-220ENST00000399655 H3BS24 57 aa6.19□□□□□ -1.42
CACNA1C-220ENST00000399655 COL5A3P25940 1745 aaPredicted RBP6.19□□□□□ -1.42
CACNA1C-220ENST00000399655 IGLV3-1P01715 115 aa6.19□□□□□ -1.42
CACNA1C-220ENST00000399655 COA5Q86WW8 74 aa6.19□□□□□ -1.42
CACNA1C-220ENST00000399655 FAM19A4Q96LR4 140 aa6.19□□□□□ -1.42
CACNA1C-220ENST00000399655 PLA2G2EQ9NZK7 142 aa6.19□□□□□ -1.42
CACNA1C-220ENST00000399655 FLVCR1-AS1Q8TAF5 88 aa6.19□□□□□ -1.42
CACNA1C-220ENST00000399655 BBC3Q96PG8 261 aaPredicted RBP6.19□□□□□ -1.42
CACNA1C-220ENST00000399655 C1orf147Q96MC9 270 aaPredicted RBP6.19□□□□□ -1.42
CACNA1C-220ENST00000399655 TP53TG3Q9ULZ0 132 aa6.18□□□□□ -1.42
CACNA1C-220ENST00000399655 FAM215AQ9Y5M1 114 aa6.18□□□□□ -1.42
CACNA1C-220ENST00000399655 HECTD1Q9ULT8 2610 aa6.18□□□□□ -1.42
CACNA1C-220ENST00000399655 NHSL1Q5SYE7 1610 aa6.18□□□□□ -1.42
CACNA1C-220ENST00000399655 DEFB116Q30KQ4 102 aa6.17□□□□□ -1.42
CACNA1C-220ENST00000399655 COL18A1P39060 1754 aa6.17□□□□□ -1.42
CACNA1C-220ENST00000399655 SPACA4Q8TDM5 124 aa6.17□□□□□ -1.42
CACNA1C-220ENST00000399655 WDR90Q96KV7 1748 aa6.17□□□□□ -1.42
CACNA1C-220ENST00000399655 COL27A1Q8IZC6 1860 aaPredicted RBP6.17□□□□□ -1.42
CACNA1C-220ENST00000399655 Q8NBF4 154 aa6.17□□□□□ -1.42
CACNA1C-220ENST00000399655 IGLV4-60A0A075B6I1 120 aa6.17□□□□□ -1.42
CACNA1C-220ENST00000399655 LTBP1Q14766 1721 aa6.16□□□□□ -1.42
CACNA1C-220ENST00000399655 IGLV7-43P04211 117 aa6.16□□□□□ -1.42
CACNA1C-220ENST00000399655 FRMD6-AS1P0C7T7 363 aa6.16□□□□□ -1.42
CACNA1C-220ENST00000399655 CHTF8P0CG12 524 aa6.16□□□□□ -1.42
CACNA1C-220ENST00000399655 A0A1B0GUV1 79 aa6.16□□□□□ -1.42
CACNA1C-220ENST00000399655 COL11A2P13942 1736 aaPredicted RBP6.16□□□□□ -1.42
CACNA1C-220ENST00000399655 CNFNQ9BYD5 112 aa6.16□□□□□ -1.42
CACNA1C-220ENST00000399655 C11orf1Q9H5F2 150 aa6.16□□□□□ -1.42
CACNA1C-220ENST00000399655 LOC110117498A0A087WWA1 95 aa6.16□□□□□ -1.42
CACNA1C-220ENST00000399655 ANKRD11Q6UB99 2663 aaPredicted RBP6.15□□□□□ -1.42
CACNA1C-220ENST00000399655 IGLV7-46A0A075B6I9 117 aa6.15□□□□□ -1.42
CACNA1C-220ENST00000399655 BPTFQ12830 3046 aa6.15□□□□□ -1.42
CACNA1C-220ENST00000399655 Q6YL49 198 aa6.15□□□□□ -1.42
CACNA1C-220ENST00000399655 Q6ZS46 218 aa6.15□□□□□ -1.42
CACNA1C-220ENST00000399655 UNQ6190/PRO20217Q6UXQ8 127 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms