RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 CXCL6P80162 114 aa8.29□□□□□ -1.08
HLCS-202ENST00000399120 Q8N2B8 174 aa8.29□□□□□ -1.08
HLCS-202ENST00000399120 PLXNB1O43157 2135 aa8.28□□□□□ -1.08
HLCS-202ENST00000399120 SMCR5Q8TEV8 140 aa8.28□□□□□ -1.08
HLCS-202ENST00000399120 SPINT4Q6UDR6 99 aa8.28□□□□□ -1.08
HLCS-202ENST00000399120 EDN2P20800 178 aa8.28□□□□□ -1.08
HLCS-202ENST00000399120 LINC00846Q9NV44 126 aa8.28□□□□□ -1.08
HLCS-202ENST00000399120 AMELXQ99217 191 aa8.28□□□□□ -1.08
HLCS-202ENST00000399120 SMIM29Q86T20 159 aa8.27□□□□□ -1.09
HLCS-202ENST00000399120 IGLV1-51P01701 117 aa8.27□□□□□ -1.09
HLCS-202ENST00000399120 VPREB1P12018 145 aa8.27□□□□□ -1.09
HLCS-202ENST00000399120 ARHGAP32A7KAX9 2087 aa8.26□□□□□ -1.09
HLCS-202ENST00000399120 C2orf16Q68DN1 1984 aa8.26□□□□□ -1.09
HLCS-202ENST00000399120 A8MTW9 85 aa8.26□□□□□ -1.09
HLCS-202ENST00000399120 TP53AIP1Q9HCN2 124 aa8.26□□□□□ -1.09
HLCS-202ENST00000399120 LINC01561Q8N1V8 128 aa8.26□□□□□ -1.09
HLCS-202ENST00000399120 ALPK3Q96L96 1907 aa8.26□□□□□ -1.09
HLCS-202ENST00000399120 Q6ZRU5 148 aa8.25□□□□□ -1.09
HLCS-202ENST00000399120 SPACA4Q8TDM5 124 aa8.25□□□□□ -1.09
HLCS-202ENST00000399120 A0A1B0GUV1 79 aa8.25□□□□□ -1.09
HLCS-202ENST00000399120 LYPD5Q6UWN5 251 aa8.25□□□□□ -1.09
HLCS-202ENST00000399120 PRO0628Q9UI54 55 aa8.25□□□□□ -1.09
HLCS-202ENST00000399120 C22orf24Q9Y442 160 aa8.25□□□□□ -1.09
HLCS-202ENST00000399120 ZNF580Q9UK33 172 aa8.24□□□□□ -1.09
HLCS-202ENST00000399120 C6orf48Q9UBA6 75 aa8.24□□□□□ -1.09
HLCS-202ENST00000399120 SMR3AQ99954 134 aa8.23□□□□□ -1.09
HLCS-202ENST00000399120 KIAA0087Q14695 138 aa8.23□□□□□ -1.09
HLCS-202ENST00000399120 ATP11AUNQ6ZP68 121 aa8.22□□□□□ -1.09
HLCS-202ENST00000399120 URB1-AS1Q96HZ7 61 aa8.22□□□□□ -1.09
HLCS-202ENST00000399120 COL4A3Q01955 1670 aa8.22□□□□□ -1.09
HLCS-202ENST00000399120 C8orf87E5RJ46 101 aa8.21□□□□□ -1.1
HLCS-202ENST00000399120 MOBPQ13875 183 aa8.21□□□□□ -1.1
HLCS-202ENST00000399120 HCFC1P51610 2035 aa8.21□□□□□ -1.1
HLCS-202ENST00000399120 AVPP01185 164 aa8.21□□□□□ -1.1
HLCS-202ENST00000399120 Q6ZSN1 163 aa8.2□□□□□ -1.1
HLCS-202ENST00000399120 MUC4Q99102 2169 aa8.19□□□□□ -1.1
HLCS-202ENST00000399120 SPATA3Q8NHX4 192 aa8.19□□□□□ -1.1
HLCS-202ENST00000399120 LINC00310P59036 64 aa8.18□□□□□ -1.1
HLCS-202ENST00000399120 PCDH15Q96QU1 1955 aa8.18□□□□□ -1.1
HLCS-202ENST00000399120 C16orf95Q9H693 158 aa8.18□□□□□ -1.1
HLCS-202ENST00000399120 CSPG4Q6UVK1 2322 aa8.18□□□□□ -1.1
HLCS-202ENST00000399120 IGLV8-61A0A075B6I0 122 aa8.17□□□□□ -1.1
HLCS-202ENST00000399120 NUP210LQ5VU65 1888 aa8.17□□□□□ -1.1
HLCS-202ENST00000399120 NHLRC4P0CG21 123 aaPredicted RBP8.16□□□□□ -1.1
HLCS-202ENST00000399120 SONP18583 2426 aaKnown RBP8.15□□□□□ -1.1
HLCS-202ENST00000399120 LINC00313P59037 77 aa8.15□□□□□ -1.1
HLCS-202ENST00000399120 H3BPC8 53 aa8.15□□□□□ -1.11
HLCS-202ENST00000399120 EML5Q05BV3 1969 aa8.14□□□□□ -1.11
HLCS-202ENST00000399120 KIAA1549LQ6ZVL6 1849 aa8.14□□□□□ -1.11
HLCS-202ENST00000399120 OTOGLQ3ZCN5 2332 aa8.14□□□□□ -1.11
HLCS-202ENST00000399120 BCE1O60756 84 aa8.14□□□□□ -1.11
HLCS-202ENST00000399120 SSBP3-AS1Q7Z2R9 100 aa8.13□□□□□ -1.11
HLCS-202ENST00000399120 LINC00167Q96N53 147 aa8.13□□□□□ -1.11
HLCS-202ENST00000399120 SPG11Q96JI7 2443 aa8.13□□□□□ -1.11
HLCS-202ENST00000399120 C4orf26Q17RF5 130 aa8.12□□□□□ -1.11
HLCS-202ENST00000399120 COX8CQ7Z4L0 72 aa8.12□□□□□ -1.11
HLCS-202ENST00000399120 EXPH5Q8NEV8 1989 aa8.12□□□□□ -1.11
HLCS-202ENST00000399120 FAM229AH3BQW9 127 aa8.11□□□□□ -1.11
HLCS-202ENST00000399120 FHL3Q13643 280 aa8.11□□□□□ -1.11
HLCS-202ENST00000399120 TECTAO75443 2155 aa8.11□□□□□ -1.11
HLCS-202ENST00000399120 MDFIQ99750 246 aa8.11□□□□□ -1.11
HLCS-202ENST00000399120 CDIP1Q9H305 208 aa8.11□□□□□ -1.11
HLCS-202ENST00000399120 A0A1B0GW54 56 aa8.1□□□□□ -1.11
HLCS-202ENST00000399120 A0A096LNJ9 63 aa8.1□□□□□ -1.11
HLCS-202ENST00000399120 C11orf72Q8NBR9 251 aa8.1□□□□□ -1.11
HLCS-202ENST00000399120 TRAV22A0A0B4J277 110 aa8.1□□□□□ -1.11
HLCS-202ENST00000399120 TYMSOSQ8TAI1 123 aa8.1□□□□□ -1.11
HLCS-202ENST00000399120 KRTAP10-9P60411 292 aa8.1□□□□□ -1.11
HLCS-202ENST00000399120 MUC6Q6W4X9 2439 aa8.1□□□□□ -1.11
HLCS-202ENST00000399120 CDSNQ15517 529 aa8.1□□□□□ -1.11
HLCS-202ENST00000399120 ZFHX2Q9C0A1 2572 aaPredicted RBP8.09□□□□□ -1.11
HLCS-202ENST00000399120 Q8NBF4 154 aa8.09□□□□□ -1.11
HLCS-202ENST00000399120 KIF25-AS1Q9Y6Z4 181 aa8.09□□□□□ -1.12
HLCS-202ENST00000399120 ATG2AQ2TAZ0 1938 aa8.08□□□□□ -1.12
HLCS-202ENST00000399120 LINC00476Q8WZB0 136 aa8.07□□□□□ -1.12
HLCS-202ENST00000399120 ANKHD1Q8IWZ3 2542 aaKnown RBP8.07□□□□□ -1.12
HLCS-202ENST00000399120 IGLV5-39A0A0G2JS06 123 aa8.07□□□□□ -1.12
HLCS-202ENST00000399120 Q96NJ1 140 aa8.07□□□□□ -1.12
HLCS-202ENST00000399120 AGRNO00468 2067 aa8.06□□□□□ -1.12
HLCS-202ENST00000399120 PTPN13Q12923 2485 aa8.06□□□□□ -1.12
HLCS-202ENST00000399120 ELOF1P60002 83 aaKnown RBP8.06□□□□□ -1.12
HLCS-202ENST00000399120 RPS28P62857 69 aaKnown RBP8.06□□□□□ -1.12
HLCS-202ENST00000399120 PHF5AQ7RTV0 110 aaKnown RBP8.05□□□□□ -1.12
HLCS-202ENST00000399120 CRIPTQ9P021 101 aa8.05□□□□□ -1.12
HLCS-202ENST00000399120 PCNX3Q9H6A9 2034 aa8.05□□□□□ -1.12
HLCS-202ENST00000399120 LINC01600Q96MT4 127 aa8.05□□□□□ -1.12
HLCS-202ENST00000399120 RAI1Q7Z5J4 1906 aaPredicted RBP8.04□□□□□ -1.12
HLCS-202ENST00000399120 HIVEP3Q5T1R4 2406 aa8.04□□□□□ -1.12
HLCS-202ENST00000399120 Q6ZQT0 140 aa8.04□□□□□ -1.12
HLCS-202ENST00000399120 IGHV3OR16-9A0A0B4J2B5 98 aa8.04□□□□□ -1.12
HLCS-202ENST00000399120 Q6ZRP5 223 aa8.04□□□□□ -1.12
HLCS-202ENST00000399120 ACACBO00763 2458 aa8.03□□□□□ -1.12
HLCS-202ENST00000399120 RPL37AP61513 92 aaKnown RBP8.03□□□□□ -1.12
HLCS-202ENST00000399120 NOTCH2Q04721 2471 aa8.03□□□□□ -1.12
HLCS-202ENST00000399120 LOC101927531A0A1B0GV80 90 aa8.03□□□□□ -1.12
HLCS-202ENST00000399120 CHTF8P0CG12 524 aa8.03□□□□□ -1.12
HLCS-202ENST00000399120 APLNQ9ULZ1 77 aa8.03□□□□□ -1.12
HLCS-202ENST00000399120 Q6ZRX8 168 aa8.02□□□□□ -1.13
HLCS-202ENST00000399120 EPM2AB3EWF7 344 aa8.02□□□□□ -1.13
HLCS-202ENST00000399120 LOC110117498A0A087WWA1 95 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms