RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 LINC00526Q96FQ7 95 aa5.76□□□□□ -1.49
PTPRD-204ENST00000397606 TM2D3Q9BRN9 247 aa5.76□□□□□ -1.49
PTPRD-204ENST00000397606 CYSRT1A8MQ03 144 aa5.76□□□□□ -1.49
PTPRD-204ENST00000397606 UBE2V1Q13404 147 aa5.76□□□□□ -1.49
PTPRD-204ENST00000397606 COX17Q14061 63 aa5.76□□□□□ -1.49
PTPRD-204ENST00000397606 DIRC1Q969H9 104 aa5.76□□□□□ -1.49
PTPRD-204ENST00000397606 WWC2-AS2Q96NR7 200 aa5.76□□□□□ -1.49
PTPRD-204ENST00000397606 LINC00308Q8TCZ7 52 aa5.75□□□□□ -1.49
PTPRD-204ENST00000397606 XAGE1AQ9HD64 81 aa5.75□□□□□ -1.49
PTPRD-204ENST00000397606 UBE2AP49459 152 aa5.75□□□□□ -1.49
PTPRD-204ENST00000397606 LOC107984640A0A0U1RRK4 108 aa5.75□□□□□ -1.49
PTPRD-204ENST00000397606 LINC01561Q8N1V8 128 aa5.75□□□□□ -1.49
PTPRD-204ENST00000397606 Q9UF83 564 aa5.75□□□□□ -1.49
PTPRD-204ENST00000397606 SETXQ7Z333 2677 aaKnown RBP5.75□□□□□ -1.49
PTPRD-204ENST00000397606 SPANXDQ9BXN6 97 aa5.74□□□□□ -1.49
PTPRD-204ENST00000397606 COX6A2Q02221 97 aa5.74□□□□□ -1.49
PTPRD-204ENST00000397606 C1orf134Q5TEV5 83 aa5.74□□□□□ -1.49
PTPRD-204ENST00000397606 LRBAP50851 2863 aa5.74□□□□□ -1.49
PTPRD-204ENST00000397606 TRBV30A0A0K0K1B3 111 aa5.74□□□□□ -1.49
PTPRD-204ENST00000397606 USP17L23D6RBM5 183 aa5.74□□□□□ -1.49
PTPRD-204ENST00000397606 F8WDY8 70 aa5.74□□□□□ -1.49
PTPRD-204ENST00000397606 INAFM2P0DMQ5 153 aa5.74□□□□□ -1.49
PTPRD-204ENST00000397606 PLAC8L1A1L4L8 177 aa5.74□□□□□ -1.49
PTPRD-204ENST00000397606 LINC00612Q8N6U2 182 aa5.74□□□□□ -1.49
PTPRD-204ENST00000397606 A0A1B0GV72 72 aa5.73□□□□□ -1.49
PTPRD-204ENST00000397606 LINC00474Q9P2X8 69 aa5.73□□□□□ -1.49
PTPRD-204ENST00000397606 A0A0B4J2C4 111 aa5.73□□□□□ -1.49
PTPRD-204ENST00000397606 K7EP34 96 aa5.73□□□□□ -1.49
PTPRD-204ENST00000397606 ORMDL1Q9P0S3 153 aa5.73□□□□□ -1.49
PTPRD-204ENST00000397606 HIVEP1P15822 2718 aa5.73□□□□□ -1.49
PTPRD-204ENST00000397606 UNQ6190/PRO20217Q6UXQ8 127 aa5.72□□□□□ -1.49
PTPRD-204ENST00000397606 TP73-AS1Q9UF72 201 aa5.72□□□□□ -1.49
PTPRD-204ENST00000397606 H3BQ85 93 aa5.72□□□□□ -1.49
PTPRD-204ENST00000397606 C2orf48Q96LS8 159 aa5.72□□□□□ -1.49
PTPRD-204ENST00000397606 F8W1H4 67 aa5.72□□□□□ -1.49
PTPRD-204ENST00000397606 SCGB1A1P11684 91 aa5.72□□□□□ -1.49
PTPRD-204ENST00000397606 H3BMG7 143 aa5.71□□□□□ -1.49
PTPRD-204ENST00000397606 FAM19A5Q7Z5A7 132 aaPredicted RBP5.71□□□□□ -1.49
PTPRD-204ENST00000397606 COX7BP24311 80 aa5.71□□□□□ -1.5
PTPRD-204ENST00000397606 KMT2BQ9UMN6 2715 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-204ENST00000397606 DEFB105AQ8NG35 78 aa5.71□□□□□ -1.5
PTPRD-204ENST00000397606 SVIPQ8NHG7 77 aa5.71□□□□□ -1.5
PTPRD-204ENST00000397606 LINC00588Q9Y4M8 146 aa5.71□□□□□ -1.5
PTPRD-204ENST00000397606 C7orf33Q8WU49 177 aa5.7□□□□□ -1.5
PTPRD-204ENST00000397606 IGHV3OR16-9A0A0B4J2B5 98 aa5.7□□□□□ -1.5
PTPRD-204ENST00000397606 DSCR8Q96T75 97 aa5.7□□□□□ -1.5
PTPRD-204ENST00000397606 M0R378 163 aa5.7□□□□□ -1.5
PTPRD-204ENST00000397606 BAALC-AS2P0C853 105 aa5.7□□□□□ -1.5
PTPRD-204ENST00000397606 CDK2AP2O75956 126 aa5.69□□□□□ -1.5
PTPRD-204ENST00000397606 GAGE2AQ6NT46 116 aa5.69□□□□□ -1.5
PTPRD-204ENST00000397606 TACC2O95359 2948 aa5.68□□□□□ -1.5
PTPRD-204ENST00000397606 MTURNQ8N3F0 131 aa5.68□□□□□ -1.5
PTPRD-204ENST00000397606 IGLV5-52A0A0A0MRZ9 124 aa5.68□□□□□ -1.5
PTPRD-204ENST00000397606 C2orf91Q6ZV80 131 aa5.68□□□□□ -1.5
PTPRD-204ENST00000397606 DNAH10OSP0CZ25 163 aa5.68□□□□□ -1.5
PTPRD-204ENST00000397606 NBDYA0A0U1RRE5 68 aa5.68□□□□□ -1.5
PTPRD-204ENST00000397606 NDUFC2-KCTD14E9PQ53 114 aa5.68□□□□□ -1.5
PTPRD-204ENST00000397606 TAX1BP3O14907 124 aa5.68□□□□□ -1.5
PTPRD-204ENST00000397606 NSD1Q96L73 2696 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-204ENST00000397606 TSPEAR-AS2P59090 65 aa5.67□□□□□ -1.5
PTPRD-204ENST00000397606 ETDBQ3ZM63 59 aa5.67□□□□□ -1.5
PTPRD-204ENST00000397606 LINC01620Q4KN68 170 aa5.67□□□□□ -1.5
PTPRD-204ENST00000397606 HIGD2AQ9BW72 106 aa5.67□□□□□ -1.5
PTPRD-204ENST00000397606 DCHS1Q96JQ0 3298 aa5.67□□□□□ -1.5
PTPRD-204ENST00000397606 FAM19A1Q7Z5A9 133 aa5.67□□□□□ -1.5
PTPRD-204ENST00000397606 PPDPFLQ8WWR9 84 aa5.67□□□□□ -1.5
PTPRD-204ENST00000397606 C6orf223Q8N319 242 aa5.67□□□□□ -1.5
PTPRD-204ENST00000397606 IGLV5-45A0A087WSX0 123 aa5.67□□□□□ -1.5
PTPRD-204ENST00000397606 IGLV5-39A0A0G2JS06 123 aa5.67□□□□□ -1.5
PTPRD-204ENST00000397606 C3orf84H3BNL1 204 aa5.67□□□□□ -1.5
PTPRD-204ENST00000397606 C9orf116Q5BN46 136 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-204ENST00000397606 TRAV23DV6A0A075B6W5 121 aa5.66□□□□□ -1.5
PTPRD-204ENST00000397606 DMDP11532 3685 aa5.66□□□□□ -1.5
PTPRD-204ENST00000397606 HRNRQ86YZ3 2850 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-204ENST00000397606 NOTCH1P46531 2555 aa5.66□□□□□ -1.5
PTPRD-204ENST00000397606 hADV29S1A0JD25 119 aa5.66□□□□□ -1.5
PTPRD-204ENST00000397606 ANKRD29Q8N6D5 301 aa5.66□□□□□ -1.5
PTPRD-204ENST00000397606 CLEC2BQ92478 149 aa5.66□□□□□ -1.5
PTPRD-204ENST00000397606 C6orf99Q4VX62 202 aa5.65□□□□□ -1.5
PTPRD-204ENST00000397606 IGKV2-28A0A075B6P5 120 aa5.65□□□□□ -1.5
PTPRD-204ENST00000397606 IGKV2D-28P01615 120 aa5.65□□□□□ -1.5
PTPRD-204ENST00000397606 NTN5Q8WTR8 489 aaPredicted RBP5.65□□□□□ -1.51
PTPRD-204ENST00000397606 TMEM256-PLSCR3K7ERE1 68 aa5.65□□□□□ -1.51
PTPRD-204ENST00000397606 ENHOQ6UWT2 76 aa5.65□□□□□ -1.51
PTPRD-204ENST00000397606 Q6ZRU5 148 aa5.65□□□□□ -1.51
PTPRD-204ENST00000397606 CFAP47Q6ZTR5 3102 aa5.64□□□□□ -1.51
PTPRD-204ENST00000397606 FUSP35637 526 aaKnown RBP eCLIP5.64□□□□□ -1.51
PTPRD-204ENST00000397606 FOXI1Q12951 378 aa5.64□□□□□ -1.51
PTPRD-204ENST00000397606 Q8N3U1 123 aa5.64□□□□□ -1.51
PTPRD-204ENST00000397606 UBL5Q9BZL1 73 aa5.64□□□□□ -1.51
PTPRD-204ENST00000397606 JMJD7-PLA2G4BH0Y9G9 81 aa5.64□□□□□ -1.51
PTPRD-204ENST00000397606 H3BT86 120 aa5.64□□□□□ -1.51
PTPRD-204ENST00000397606 OCIAD2Q56VL3 154 aa5.64□□□□□ -1.51
PTPRD-204ENST00000397606 TRBV10-2A0A0K0K1G8 114 aa5.63□□□□□ -1.51
PTPRD-204ENST00000397606 M0QXV9 152 aa5.63□□□□□ -1.51
PTPRD-204ENST00000397606 ZANQ9Y493 2812 aa5.62□□□□□ -1.51
PTPRD-204ENST00000397606 ZNF73O43830 326 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-204ENST00000397606 NDUFC2O95298 119 aa5.62□□□□□ -1.51
PTPRD-204ENST00000397606 TRIAP1O43715 76 aa5.62□□□□□ -1.51
PTPRD-204ENST00000397606 ADAMTSL4-AS1Q5T5F5 129 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms