RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 PLAC8Q9NZF1 115 aa16.1■□□□□ 0.17
TSPAN4-207ENST00000397411 SPINK8P0C7L1 97 aa16.09■□□□□ 0.17
TSPAN4-207ENST00000397411 INAFM2P0DMQ5 153 aa16.09■□□□□ 0.17
TSPAN4-207ENST00000397411 IGLC3P0DOY3 106 aa16.09■□□□□ 0.17
TSPAN4-207ENST00000397411 C6orf48Q9UBA6 75 aa16.09■□□□□ 0.17
TSPAN4-207ENST00000397411 TRBV30A0A0K0K1B3 111 aa16.08■□□□□ 0.16
TSPAN4-207ENST00000397411 CHTOPQ9Y3Y2 248 aaKnown RBP16.08■□□□□ 0.16
TSPAN4-207ENST00000397411 SMIM1B2RUZ4 78 aa16.07■□□□□ 0.16
TSPAN4-207ENST00000397411 COX7B2Q8TF08 81 aa16.06■□□□□ 0.16
TSPAN4-207ENST00000397411 LEPROTL1O95214 131 aa16.05■□□□□ 0.16
TSPAN4-207ENST00000397411 RPL37AP61513 92 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-207ENST00000397411 C7orf33Q8WU49 177 aa16.04■□□□□ 0.16
TSPAN4-207ENST00000397411 TRAV12-1A0A0B4J245 112 aa16.03■□□□□ 0.16
TSPAN4-207ENST00000397411 CXCL5P42830 114 aa16.03■□□□□ 0.16
TSPAN4-207ENST00000397411 GAGE2EQ4V326 116 aa16.03■□□□□ 0.16
TSPAN4-207ENST00000397411 TMEM170BQ5T4T1 132 aa16.03■□□□□ 0.16
TSPAN4-207ENST00000397411 GAGE2DQ9UEU5 116 aa16.03■□□□□ 0.16
TSPAN4-207ENST00000397411 TLX1NBP0CAT3 122 aa16.02■□□□□ 0.16
TSPAN4-207ENST00000397411 ZNF22P17026 224 aaPredicted RBP16.02■□□□□ 0.16
TSPAN4-207ENST00000397411 F8VRH5 84 aa16.01■□□□□ 0.15
TSPAN4-207ENST00000397411 H0Y8G0 127 aa16.01■□□□□ 0.15
TSPAN4-207ENST00000397411 NUPR1O60356 82 aa16.01■□□□□ 0.15
TSPAN4-207ENST00000397411 FABP4P15090 132 aa16.01■□□□□ 0.15
TSPAN4-207ENST00000397411 LINC00310P59036 64 aa16.01■□□□□ 0.15
TSPAN4-207ENST00000397411 C9orf116Q5BN46 136 aaPredicted RBP16.01■□□□□ 0.15
TSPAN4-207ENST00000397411 HSPB8Q9UJY1 196 aa16.01■□□□□ 0.15
TSPAN4-207ENST00000397411 C11orf86A6NJI1 115 aa16■□□□□ 0.15
TSPAN4-207ENST00000397411 Q6ZRP5 223 aa16■□□□□ 0.15
TSPAN4-207ENST00000397411 FAT1Q14517 4588 aa15.99■□□□□ 0.15
TSPAN4-207ENST00000397411 HIST1H2BKO60814 126 aa15.99■□□□□ 0.15
TSPAN4-207ENST00000397411 HIST1H2BJP06899 126 aa15.99■□□□□ 0.15
TSPAN4-207ENST00000397411 HIST1H2BOP23527 126 aa15.99■□□□□ 0.15
TSPAN4-207ENST00000397411 HIST1H2BBP33778 126 aa15.99■□□□□ 0.15
TSPAN4-207ENST00000397411 HIST1H2BDP58876 126 aa15.99■□□□□ 0.15
TSPAN4-207ENST00000397411 HIST1H2BCP62807 126 aa15.99■□□□□ 0.15
TSPAN4-207ENST00000397411 HIST2H2BEQ16778 126 aa15.99■□□□□ 0.15
TSPAN4-207ENST00000397411 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.99■□□□□ 0.15
TSPAN4-207ENST00000397411 HIST1H2BHQ93079 126 aa15.99■□□□□ 0.15
TSPAN4-207ENST00000397411 HIST1H2BNQ99877 126 aa15.99■□□□□ 0.15
TSPAN4-207ENST00000397411 HIST1H2BMQ99879 126 aa15.99■□□□□ 0.15
TSPAN4-207ENST00000397411 NDUFC2-KCTD14E9PQ53 114 aa15.98■□□□□ 0.15
TSPAN4-207ENST00000397411 A0A1W2PNN7 141 aa15.96■□□□□ 0.15
TSPAN4-207ENST00000397411 ABCA13Q86UQ4 5058 aa15.95■□□□□ 0.14
TSPAN4-207ENST00000397411 PCLOQ9Y6V0 5065 aa15.94■□□□□ 0.14
TSPAN4-207ENST00000397411 IGLV5-39A0A0G2JS06 123 aa15.92■□□□□ 0.14
TSPAN4-207ENST00000397411 MAP1LC3CQ9BXW4 147 aa15.91■□□□□ 0.14
TSPAN4-207ENST00000397411 ODF1Q14990 250 aa15.89■□□□□ 0.13
TSPAN4-207ENST00000397411 FAM19A5Q7Z5A7 132 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-207ENST00000397411 SRRM2Q9UQ35 2752 aaKnown RBP15.88■□□□□ 0.13
TSPAN4-207ENST00000397411 VPS13BQ7Z7G8 4022 aa15.88■□□□□ 0.13
TSPAN4-207ENST00000397411 TMEM223A0PJW6 202 aa15.88■□□□□ 0.13
TSPAN4-207ENST00000397411 KRTAP10-4P60372 401 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-207ENST00000397411 FAM168BA1KXE4 195 aa15.87■□□□□ 0.13
TSPAN4-207ENST00000397411 COA6Q5JTJ3 125 aaKnown RBP15.85■□□□□ 0.13
TSPAN4-207ENST00000397411 C9orf129Q5T035 196 aaKnown RBP15.85■□□□□ 0.13
TSPAN4-207ENST00000397411 PHF5AQ7RTV0 110 aaKnown RBP15.85■□□□□ 0.13
TSPAN4-207ENST00000397411 XAGE1AQ9HD64 81 aa15.85■□□□□ 0.13
TSPAN4-207ENST00000397411 PLNP26678 52 aa15.84■□□□□ 0.13
TSPAN4-207ENST00000397411 SFTA2Q6UW10 78 aa15.84■□□□□ 0.13
TSPAN4-207ENST00000397411 DPM2O94777 84 aa15.83■□□□□ 0.12
TSPAN4-207ENST00000397411 PFN2P35080 140 aa15.83■□□□□ 0.12
TSPAN4-207ENST00000397411 PMCHL2Q9BQD1 86 aa15.83■□□□□ 0.12
TSPAN4-207ENST00000397411 ZNF625Q96I27 306 aaPredicted RBP15.82■□□□□ 0.12
TSPAN4-207ENST00000397411 IGKCP01834 107 aa15.8■□□□□ 0.12
TSPAN4-207ENST00000397411 PRR3P79522 188 aaKnown RBP15.8■□□□□ 0.12
TSPAN4-207ENST00000397411 ERG28Q9UKR5 140 aa15.8■□□□□ 0.12
TSPAN4-207ENST00000397411 FLG2Q5D862 2391 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-207ENST00000397411 M0QXV9 152 aa15.79■□□□□ 0.12
TSPAN4-207ENST00000397411 HERVK_113P61574 105 aa15.78■□□□□ 0.12
TSPAN4-207ENST00000397411 SYS1-DBNDD2H3BUS1 97 aa15.77■□□□□ 0.12
TSPAN4-207ENST00000397411 UBE2BP63146 152 aa15.77■□□□□ 0.12
TSPAN4-207ENST00000397411 COX17Q14061 63 aa15.76■□□□□ 0.11
TSPAN4-207ENST00000397411 HNRNPA3P51991 378 aaKnown RBP15.75■□□□□ 0.11
TSPAN4-207ENST00000397411 LINC00158P58513 81 aa15.74■□□□□ 0.11
TSPAN4-207ENST00000397411 LBHQ53QV2 105 aaPredicted RBP15.74■□□□□ 0.11
TSPAN4-207ENST00000397411 SERTAD4-AS1Q5TG53 156 aa15.74■□□□□ 0.11
TSPAN4-207ENST00000397411 KRTAP7-1Q8IUC3 87 aa15.74■□□□□ 0.11
TSPAN4-207ENST00000397411 PLEKHB2Q96CS7 222 aa15.74■□□□□ 0.11
TSPAN4-207ENST00000397411 LEPROTO15243 131 aa15.73■□□□□ 0.11
TSPAN4-207ENST00000397411 PSORS1C2Q9UIG4 136 aa15.73■□□□□ 0.11
TSPAN4-207ENST00000397411 C22orf24Q9Y442 160 aa15.73■□□□□ 0.11
TSPAN4-207ENST00000397411 S100A6P06703 90 aa15.72■□□□□ 0.11
TSPAN4-207ENST00000397411 PET117Q6UWS5 81 aa15.72■□□□□ 0.11
TSPAN4-207ENST00000397411 NDUFA12Q9UI09 145 aa15.72■□□□□ 0.11
TSPAN4-207ENST00000397411 MYMXA0A1B0GTQ4 84 aa15.71■□□□□ 0.11
TSPAN4-207ENST00000397411 J3QL48 77 aa15.71■□□□□ 0.11
TSPAN4-207ENST00000397411 HERV-K104P63124 156 aa15.71■□□□□ 0.11
TSPAN4-207ENST00000397411 MEIG1Q5JSS6 88 aa15.71■□□□□ 0.11
TSPAN4-207ENST00000397411 C1orf137Q5JT78 98 aa15.71■□□□□ 0.11
TSPAN4-207ENST00000397411 A0A0U1RRA0 63 aa15.7■□□□□ 0.1
TSPAN4-207ENST00000397411 KRTDAPP60985 99 aa15.7■□□□□ 0.1
TSPAN4-207ENST00000397411 SND1-IT1Q9HBX3 110 aa15.69■□□□□ 0.1
TSPAN4-207ENST00000397411 LINC00587B1AMM8 73 aa15.68■□□□□ 0.1
TSPAN4-207ENST00000397411 C3orf79P0CE67 100 aa15.68■□□□□ 0.1
TSPAN4-207ENST00000397411 LGALS3P17931 250 aaKnown RBP15.68■□□□□ 0.1
TSPAN4-207ENST00000397411 NKAPP1Q8N9T2 125 aa15.68■□□□□ 0.1
TSPAN4-207ENST00000397411 PLA2G2DQ9UNK4 145 aa15.68■□□□□ 0.1
TSPAN4-207ENST00000397411 C20orf202A1L168 122 aa15.67■□□□□ 0.1
TSPAN4-207ENST00000397411 J3QQQ9 107 aa15.67■□□□□ 0.1
TSPAN4-207ENST00000397411 S100A2P29034 98 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms