RNA–Protein interactions for RNA: ENST00000397370.3

RBM39-205, Transcript of RNA binding motif protein 39, humanhuman

TSL 2 BASIC

Gene RBM39, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-205ENST00000397370 F8VRH5 84 aa10.3□□□□□ -0.76
RBM39-205ENST00000397370 CIRBPQ14011 172 aaKnown RBP10.3□□□□□ -0.76
RBM39-205ENST00000397370 C6orf226Q5I0X4 101 aa10.3□□□□□ -0.76
RBM39-205ENST00000397370 C2orf82Q6UX34 121 aa10.3□□□□□ -0.76
RBM39-205ENST00000397370 LOC107984640A0A0U1RRK4 108 aa10.29□□□□□ -0.76
RBM39-205ENST00000397370 H0Y8G0 127 aa10.29□□□□□ -0.76
RBM39-205ENST00000397370 CIRBP-AS1Q8TBR5 109 aa10.29□□□□□ -0.76
RBM39-205ENST00000397370 KRTAP17-1Q9BYP8 105 aa10.29□□□□□ -0.76
RBM39-205ENST00000397370 C6orf48Q9UBA6 75 aa10.29□□□□□ -0.76
RBM39-205ENST00000397370 A0A096LNI7 61 aa10.28□□□□□ -0.76
RBM39-205ENST00000397370 CKS1BP61024 79 aa10.28□□□□□ -0.76
RBM39-205ENST00000397370 ODF1Q14990 250 aa10.28□□□□□ -0.76
RBM39-205ENST00000397370 TMEM170BQ5T4T1 132 aa10.28□□□□□ -0.76
RBM39-205ENST00000397370 SPACA4Q8TDM5 124 aa10.28□□□□□ -0.76
RBM39-205ENST00000397370 COX7B2Q8TF08 81 aa10.28□□□□□ -0.76
RBM39-205ENST00000397370 IGKV2-24A0A0C4DH68 120 aa10.27□□□□□ -0.77
RBM39-205ENST00000397370 IGLV5-39A0A0G2JS06 123 aa10.26□□□□□ -0.77
RBM39-205ENST00000397370 TRBV30A0A0K0K1B3 111 aa10.26□□□□□ -0.77
RBM39-205ENST00000397370 SMR3BP02814 79 aaPredicted RBP10.26□□□□□ -0.77
RBM39-205ENST00000397370 Q8N1X5 172 aa10.26□□□□□ -0.77
RBM39-205ENST00000397370 DPH3Q96FX2 82 aa10.26□□□□□ -0.77
RBM39-205ENST00000397370 MAP1LC3CQ9BXW4 147 aa10.26□□□□□ -0.77
RBM39-205ENST00000397370 CXCL5P42830 114 aa10.25□□□□□ -0.77
RBM39-205ENST00000397370 PTTG1IPP53801 180 aa10.25□□□□□ -0.77
RBM39-205ENST00000397370 GAGE2BQ13066 116 aa10.25□□□□□ -0.77
RBM39-205ENST00000397370 MAJINQ3KP22 176 aa10.25□□□□□ -0.77
RBM39-205ENST00000397370 HERC2O95714 4834 aa10.24□□□□□ -0.77
RBM39-205ENST00000397370 A0A087WYN8 130 aa10.24□□□□□ -0.77
RBM39-205ENST00000397370 TLX1NBP0CAT3 122 aa10.24□□□□□ -0.77
RBM39-205ENST00000397370 RPL18AQ02543 176 aaKnown RBP10.24□□□□□ -0.77
RBM39-205ENST00000397370 LINC00474Q9P2X8 69 aa10.24□□□□□ -0.77
RBM39-205ENST00000397370 TMEM223A0PJW6 202 aa10.23□□□□□ -0.77
RBM39-205ENST00000397370 C9orf116Q5BN46 136 aaPredicted RBP10.23□□□□□ -0.77
RBM39-205ENST00000397370 STPG4Q8N801 248 aa10.22□□□□□ -0.77
RBM39-205ENST00000397370 PLAC8Q9NZF1 115 aa10.22□□□□□ -0.77
RBM39-205ENST00000397370 SYS1-DBNDD2H3BUS1 97 aa10.21□□□□□ -0.77
RBM39-205ENST00000397370 PLNP26678 52 aa10.21□□□□□ -0.77
RBM39-205ENST00000397370 Q6ZRP5 223 aa10.21□□□□□ -0.77
RBM39-205ENST00000397370 PMCHL2Q9BQD1 86 aa10.21□□□□□ -0.77
RBM39-205ENST00000397370 DPM2O94777 84 aa10.2□□□□□ -0.78
RBM39-205ENST00000397370 LINC00528Q8N1L1 170 aa10.2□□□□□ -0.78
RBM39-205ENST00000397370 EPM2AB3EWF7 344 aa10.19□□□□□ -0.78
RBM39-205ENST00000397370 NDUFC2-KCTD14E9PQ53 114 aa10.19□□□□□ -0.78
RBM39-205ENST00000397370 IGKCP01834 107 aa10.19□□□□□ -0.78
RBM39-205ENST00000397370 KRTAP4-5Q9BYR2 181 aa10.19□□□□□ -0.78
RBM39-205ENST00000397370 FAM229AH3BQW9 127 aa10.18□□□□□ -0.78
RBM39-205ENST00000397370 C3orf79P0CE67 100 aa10.18□□□□□ -0.78
RBM39-205ENST00000397370 GAGE2EQ4V326 116 aa10.18□□□□□ -0.78
RBM39-205ENST00000397370 Q5VSD8 79 aa10.18□□□□□ -0.78
RBM39-205ENST00000397370 GAGE2DQ9UEU5 116 aa10.18□□□□□ -0.78
RBM39-205ENST00000397370 PET117Q6UWS5 81 aa10.17□□□□□ -0.78
RBM39-205ENST00000397370 A0A1W2PNN7 141 aa10.16□□□□□ -0.78
RBM39-205ENST00000397370 S100A6P06703 90 aa10.16□□□□□ -0.78
RBM39-205ENST00000397370 LINC01545Q5VT33 79 aa10.16□□□□□ -0.78
RBM39-205ENST00000397370 HIST3H2BBQ8N257 126 aa10.16□□□□□ -0.78
RBM39-205ENST00000397370 KRTDAPP60985 99 aa10.15□□□□□ -0.78
RBM39-205ENST00000397370 SFTA2Q6UW10 78 aa10.15□□□□□ -0.78
RBM39-205ENST00000397370 FAT1Q14517 4588 aa10.15□□□□□ -0.78
RBM39-205ENST00000397370 ZNF625Q96I27 306 aaPredicted RBP10.14□□□□□ -0.79
RBM39-205ENST00000397370 LEPROTO15243 131 aa10.13□□□□□ -0.79
RBM39-205ENST00000397370 HERVK_113P61574 105 aa10.13□□□□□ -0.79
RBM39-205ENST00000397370 C9orf129Q5T035 196 aaKnown RBP10.13□□□□□ -0.79
RBM39-205ENST00000397370 FAM168BA1KXE4 195 aa10.12□□□□□ -0.79
RBM39-205ENST00000397370 PLA2G1BP04054 148 aaKnown RBP10.12□□□□□ -0.79
RBM39-205ENST00000397370 S100A2P29034 98 aa10.12□□□□□ -0.79
RBM39-205ENST00000397370 PLEKHB2Q96CS7 222 aa10.12□□□□□ -0.79
RBM39-205ENST00000397370 ERG28Q9UKR5 140 aa10.12□□□□□ -0.79
RBM39-205ENST00000397370 HIST1H2BLQ99880 126 aa10.11□□□□□ -0.79
RBM39-205ENST00000397370 XAGE1AQ9HD64 81 aa10.11□□□□□ -0.79
RBM39-205ENST00000397370 VPS13BQ7Z7G8 4022 aa10.11□□□□□ -0.79
RBM39-205ENST00000397370 PFN2P35080 140 aa10.1□□□□□ -0.79
RBM39-205ENST00000397370 TSPEAR-AS2P59090 65 aa10.1□□□□□ -0.79
RBM39-205ENST00000397370 SNRPEP62304 92 aaKnown RBP10.1□□□□□ -0.79
RBM39-205ENST00000397370 C7orf33Q8WU49 177 aa10.1□□□□□ -0.79
RBM39-205ENST00000397370 C20orf202A1L168 122 aa10.09□□□□□ -0.79
RBM39-205ENST00000397370 J3QQQ9 107 aa10.09□□□□□ -0.79
RBM39-205ENST00000397370 KRTAP10-4P60372 401 aaPredicted RBP10.09□□□□□ -0.79
RBM39-205ENST00000397370 RPL37AP61513 92 aaKnown RBP10.09□□□□□ -0.79
RBM39-205ENST00000397370 COX17Q14061 63 aa10.09□□□□□ -0.79
RBM39-205ENST00000397370 FAM19A5Q7Z5A7 132 aaPredicted RBP10.09□□□□□ -0.79
RBM39-205ENST00000397370 KRTAP7-1Q8IUC3 87 aa10.09□□□□□ -0.79
RBM39-205ENST00000397370 NDUFA12Q9UI09 145 aa10.09□□□□□ -0.79
RBM39-205ENST00000397370 E9PLD3 99 aa10.08□□□□□ -0.8
RBM39-205ENST00000397370 HERV-K104P63124 156 aa10.08□□□□□ -0.8
RBM39-205ENST00000397370 MYMXA0A1B0GTQ4 84 aa10.07□□□□□ -0.8
RBM39-205ENST00000397370 C5orf52A6NGY3 159 aa10.07□□□□□ -0.8
RBM39-205ENST00000397370 PHF5AQ7RTV0 110 aaKnown RBP10.07□□□□□ -0.8
RBM39-205ENST00000397370 LGALS3P17931 250 aaKnown RBP10.06□□□□□ -0.8
RBM39-205ENST00000397370 LINC00158P58513 81 aa10.05□□□□□ -0.8
RBM39-205ENST00000397370 MEIG1Q5JSS6 88 aa10.05□□□□□ -0.8
RBM39-205ENST00000397370 SERTAD4-AS1Q5TG53 156 aa10.05□□□□□ -0.8
RBM39-205ENST00000397370 A0A0U1RRA0 63 aa10.04□□□□□ -0.8
RBM39-205ENST00000397370 M0QXV9 152 aa10.04□□□□□ -0.8
RBM39-205ENST00000397370 SMIM13P0DJ93 91 aa10.04□□□□□ -0.8
RBM39-205ENST00000397370 NMUP48645 174 aa10.04□□□□□ -0.8
RBM39-205ENST00000397370 SND1-IT1Q9HBX3 110 aa10.04□□□□□ -0.8
RBM39-205ENST00000397370 PLA2G2DQ9UNK4 145 aa10.04□□□□□ -0.8
RBM39-205ENST00000397370 LINC00587B1AMM8 73 aa10.03□□□□□ -0.8
RBM39-205ENST00000397370 INAFM2P0DMQ5 153 aa10.03□□□□□ -0.8
RBM39-205ENST00000397370 AKR1D1P51857 326 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms