RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 TET2Q6N021 2002 aaPredicted RBP8.86□□□□□ -0.99
SMU1-201ENST00000397149 GOLGB1Q14789 3259 aaKnown RBP8.85□□□□□ -0.99
SMU1-201ENST00000397149 LINC00242Q5T6M2 205 aa8.85□□□□□ -0.99
SMU1-201ENST00000397149 PRORYQ9H606 182 aa8.85□□□□□ -0.99
SMU1-201ENST00000397149 FHL2Q14192 279 aa8.85□□□□□ -0.99
SMU1-201ENST00000397149 C2orf91Q6ZV80 131 aa8.85□□□□□ -0.99
SMU1-201ENST00000397149 PSMG3-AS1Q96PY0 264 aa8.85□□□□□ -0.99
SMU1-201ENST00000397149 C11orf21Q9P2W6 132 aa8.85□□□□□ -0.99
SMU1-201ENST00000397149 C8orf87E5RJ46 101 aa8.84□□□□□ -0.99
SMU1-201ENST00000397149 J3QL48 77 aa8.84□□□□□ -0.99
SMU1-201ENST00000397149 ZFHX2Q9C0A1 2572 aaPredicted RBP8.82□□□□□ -1
SMU1-201ENST00000397149 ZNF106Q9H2Y7 1883 aaKnown RBP8.82□□□□□ -1
SMU1-201ENST00000397149 CHTF8P0CG12 524 aa8.82□□□□□ -1
SMU1-201ENST00000397149 ATG2AQ2TAZ0 1938 aa8.81□□□□□ -1
SMU1-201ENST00000397149 SMIM1B2RUZ4 78 aa8.81□□□□□ -1
SMU1-201ENST00000397149 A0A1W2PNU3 283 aaPredicted RBP8.81□□□□□ -1
SMU1-201ENST00000397149 ZNF580Q9UK33 172 aa8.81□□□□□ -1
SMU1-201ENST00000397149 FAM229AH3BQW9 127 aa8.81□□□□□ -1
SMU1-201ENST00000397149 Q6ZRU5 148 aa8.8□□□□□ -1
SMU1-201ENST00000397149 TANC1Q9C0D5 1861 aa8.8□□□□□ -1
SMU1-201ENST00000397149 C22orf24Q9Y442 160 aa8.8□□□□□ -1
SMU1-201ENST00000397149 Q96NJ1 140 aa8.8□□□□□ -1
SMU1-201ENST00000397149 KIAA0087Q14695 138 aa8.8□□□□□ -1
SMU1-201ENST00000397149 FBXL19-AS1Q494R0 122 aa8.79□□□□□ -1
SMU1-201ENST00000397149 PLXNA2O75051 1894 aa8.79□□□□□ -1
SMU1-201ENST00000397149 POLR2KP53803 58 aaKnown RBP8.79□□□□□ -1
SMU1-201ENST00000397149 MYO18BQ8IUG5 2567 aa8.79□□□□□ -1
SMU1-201ENST00000397149 ADAMTSL4-AS1Q5T5F5 129 aa8.79□□□□□ -1
SMU1-201ENST00000397149 YPEL4Q96NS1 127 aa8.78□□□□□ -1
SMU1-201ENST00000397149 CRIPTQ9P021 101 aa8.78□□□□□ -1
SMU1-201ENST00000397149 LINC00313P59037 77 aa8.77□□□□□ -1
SMU1-201ENST00000397149 LINC00846Q9NV44 126 aa8.77□□□□□ -1
SMU1-201ENST00000397149 TYMSOSQ8TAI1 123 aa8.77□□□□□ -1.01
SMU1-201ENST00000397149 MUC6Q6W4X9 2439 aa8.77□□□□□ -1.01
SMU1-201ENST00000397149 LINC01554Q52M75 96 aa8.77□□□□□ -1.01
SMU1-201ENST00000397149 KLLNB2CW77 178 aa8.77□□□□□ -1.01
SMU1-201ENST00000397149 BRWD1-AS2P59051 145 aa8.77□□□□□ -1.01
SMU1-201ENST00000397149 MUC7Q8TAX7 377 aa8.76□□□□□ -1.01
SMU1-201ENST00000397149 CXCL6P80162 114 aa8.76□□□□□ -1.01
SMU1-201ENST00000397149 C4orf26Q17RF5 130 aa8.76□□□□□ -1.01
SMU1-201ENST00000397149 MDFIQ99750 246 aa8.76□□□□□ -1.01
SMU1-201ENST00000397149 PLXNB3Q9ULL4 1909 aa8.76□□□□□ -1.01
SMU1-201ENST00000397149 TSPEAR-AS2P59090 65 aa8.75□□□□□ -1.01
SMU1-201ENST00000397149 NUP210LQ5VU65 1888 aa8.75□□□□□ -1.01
SMU1-201ENST00000397149 LYPD5Q6UWN5 251 aa8.74□□□□□ -1.01
SMU1-201ENST00000397149 F8P00451 2351 aa8.74□□□□□ -1.01
SMU1-201ENST00000397149 RPL37AP61513 92 aaKnown RBP8.74□□□□□ -1.01
SMU1-201ENST00000397149 CHCHD7Q9BUK0 85 aa8.74□□□□□ -1.01
SMU1-201ENST00000397149 CACNA1AO00555 2505 aa8.74□□□□□ -1.01
SMU1-201ENST00000397149 IGIPA6NJ69 53 aa8.73□□□□□ -1.01
SMU1-201ENST00000397149 C9orf129Q5T035 196 aaKnown RBP8.73□□□□□ -1.01
SMU1-201ENST00000397149 DENND4CQ5VZ89 1909 aa8.73□□□□□ -1.01
SMU1-201ENST00000397149 NUP210Q8TEM1 1887 aaPredicted RBP8.73□□□□□ -1.01
SMU1-201ENST00000397149 ODF3L2Q3SX64 289 aa8.73□□□□□ -1.01
SMU1-201ENST00000397149 BDP1A6H8Y1 2624 aa8.73□□□□□ -1.01
SMU1-201ENST00000397149 NOTCH4Q99466 2003 aa8.73□□□□□ -1.01
SMU1-201ENST00000397149 LINC01600Q96MT4 127 aa8.72□□□□□ -1.01
SMU1-201ENST00000397149 C11orf1Q9H5F2 150 aa8.72□□□□□ -1.01
SMU1-201ENST00000397149 C2CD3Q4AC94 2353 aa8.72□□□□□ -1.01
SMU1-201ENST00000397149 C16orf90A8MZG2 172 aa8.72□□□□□ -1.01
SMU1-201ENST00000397149 Q8N2B8 174 aa8.71□□□□□ -1.01
SMU1-201ENST00000397149 P0C879 139 aa8.71□□□□□ -1.02
SMU1-201ENST00000397149 CUL9Q8IWT3 2517 aa8.71□□□□□ -1.02
SMU1-201ENST00000397149 PRO0628Q9UI54 55 aa8.71□□□□□ -1.02
SMU1-201ENST00000397149 EML5Q05BV3 1969 aa8.7□□□□□ -1.02
SMU1-201ENST00000397149 IGLV6-57P01721 117 aa8.7□□□□□ -1.02
SMU1-201ENST00000397149 FAM19A4Q96LR4 140 aa8.7□□□□□ -1.02
SMU1-201ENST00000397149 PHF5AQ7RTV0 110 aaKnown RBP8.7□□□□□ -1.02
SMU1-201ENST00000397149 Q6ZSN1 163 aa8.7□□□□□ -1.02
SMU1-201ENST00000397149 C11orf71Q6IPW1 123 aa8.68□□□□□ -1.02
SMU1-201ENST00000397149 AVPP01185 164 aa8.68□□□□□ -1.02
SMU1-201ENST00000397149 TP53AIP1Q9HCN2 124 aa8.68□□□□□ -1.02
SMU1-201ENST00000397149 IGLV1-40P01703 118 aa8.68□□□□□ -1.02
SMU1-201ENST00000397149 SPATA3Q8NHX4 192 aa8.67□□□□□ -1.02
SMU1-201ENST00000397149 ZNF295-AS1Q8N0V1 137 aa8.67□□□□□ -1.02
SMU1-201ENST00000397149 ACACBO00763 2458 aa8.67□□□□□ -1.02
SMU1-201ENST00000397149 KRTAP10-9P60411 292 aa8.66□□□□□ -1.02
SMU1-201ENST00000397149 Q6ZPA2 131 aa8.66□□□□□ -1.02
SMU1-201ENST00000397149 A0A0D9SG42 100 aa8.66□□□□□ -1.02
SMU1-201ENST00000397149 LINC00167Q96N53 147 aa8.66□□□□□ -1.02
SMU1-201ENST00000397149 LINC00574Q9H8X3 128 aa8.65□□□□□ -1.02
SMU1-201ENST00000397149 C9orf92A6NGG3 77 aa8.64□□□□□ -1.03
SMU1-201ENST00000397149 EP400Q96L91 3159 aa8.64□□□□□ -1.03
SMU1-201ENST00000397149 IGLV1-51P01701 117 aa8.64□□□□□ -1.03
SMU1-201ENST00000397149 KIAA1549LQ6ZVL6 1849 aa8.63□□□□□ -1.03
SMU1-201ENST00000397149 TRAV22A0A0B4J277 110 aa8.62□□□□□ -1.03
SMU1-201ENST00000397149 MYO9AB2RTY4 2548 aa8.62□□□□□ -1.03
SMU1-201ENST00000397149 RAI1Q7Z5J4 1906 aaPredicted RBP8.62□□□□□ -1.03
SMU1-201ENST00000397149 FHL3Q13643 280 aa8.61□□□□□ -1.03
SMU1-201ENST00000397149 EPM2AB3EWF7 344 aa8.61□□□□□ -1.03
SMU1-201ENST00000397149 RTL8CO15255 209 aa8.6□□□□□ -1.03
SMU1-201ENST00000397149 EIF4EBP1Q13541 118 aaPredicted RBP8.6□□□□□ -1.03
SMU1-201ENST00000397149 LINC00476Q8WZB0 136 aa8.6□□□□□ -1.03
SMU1-201ENST00000397149 CDIP1Q9H305 208 aa8.6□□□□□ -1.03
SMU1-201ENST00000397149 ST20-AS1Q8NBB2 130 aa8.59□□□□□ -1.03
SMU1-201ENST00000397149 NHLRC4P0CG21 123 aaPredicted RBP8.58□□□□□ -1.04
SMU1-201ENST00000397149 F8WDY8 70 aa8.58□□□□□ -1.04
SMU1-201ENST00000397149 CDSNQ15517 529 aa8.58□□□□□ -1.04
SMU1-201ENST00000397149 ALPK3Q96L96 1907 aa8.58□□□□□ -1.04
SMU1-201ENST00000397149 LUZP6Q538Z0 58 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms