RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 NANOS2P60321 138 aaKnown RBP9.66□□□□□ -0.86
NUP98-204ENST00000397004 LECT2O14960 151 aa9.66□□□□□ -0.86
NUP98-204ENST00000397004 PF4P02776 101 aa9.66□□□□□ -0.86
NUP98-204ENST00000397004 COPS9Q8WXC6 57 aa9.66□□□□□ -0.86
NUP98-204ENST00000397004 OVOL2Q9BRP0 275 aa9.65□□□□□ -0.86
NUP98-204ENST00000397004 Q8NDZ9 215 aa9.65□□□□□ -0.86
NUP98-204ENST00000397004 ITPR2Q14571 2701 aa9.65□□□□□ -0.86
NUP98-204ENST00000397004 C3orf22Q8N5N4 141 aa9.64□□□□□ -0.87
NUP98-204ENST00000397004 A0A087WVE0 104 aa9.64□□□□□ -0.87
NUP98-204ENST00000397004 LINC00959A0A1B0GUT2 108 aa9.64□□□□□ -0.87
NUP98-204ENST00000397004 Q8N3U1 123 aa9.64□□□□□ -0.87
NUP98-204ENST00000397004 C16orf74Q96GX8 76 aa9.63□□□□□ -0.87
NUP98-204ENST00000397004 TRGV4A0A0C4DH28 118 aa9.63□□□□□ -0.87
NUP98-204ENST00000397004 IGKV3D-7A0A0C4DH55 119 aa9.63□□□□□ -0.87
NUP98-204ENST00000397004 WFDC11Q8NEX6 87 aa9.63□□□□□ -0.87
NUP98-204ENST00000397004 IBA57-AS1B1ANH7 110 aa9.63□□□□□ -0.87
NUP98-204ENST00000397004 CLPSL2Q6UWE3 100 aa9.63□□□□□ -0.87
NUP98-204ENST00000397004 CXCL5P42830 114 aa9.62□□□□□ -0.87
NUP98-204ENST00000397004 INAFM2P0DMQ5 153 aa9.62□□□□□ -0.87
NUP98-204ENST00000397004 LY6G6DO95868 133 aa9.61□□□□□ -0.87
NUP98-204ENST00000397004 LINC01561Q8N1V8 128 aa9.61□□□□□ -0.87
NUP98-204ENST00000397004 LINC00526Q96FQ7 95 aa9.61□□□□□ -0.87
NUP98-204ENST00000397004 XCL1P47992 114 aa9.61□□□□□ -0.87
NUP98-204ENST00000397004 KRTAP1-1Q07627 177 aa9.61□□□□□ -0.87
NUP98-204ENST00000397004 LOC107984640A0A0U1RRK4 108 aa9.61□□□□□ -0.87
NUP98-204ENST00000397004 PAX4O43316 350 aa9.61□□□□□ -0.87
NUP98-204ENST00000397004 TRRAPQ9Y4A5 3859 aa9.6□□□□□ -0.87
NUP98-204ENST00000397004 IGLV1-51P01701 117 aa9.6□□□□□ -0.87
NUP98-204ENST00000397004 C9orf153Q5TBE3 101 aa9.6□□□□□ -0.87
NUP98-204ENST00000397004 LINC01006Q8NI28 216 aa9.6□□□□□ -0.87
NUP98-204ENST00000397004 A0A096LPF7 62 aa9.59□□□□□ -0.87
NUP98-204ENST00000397004 UQCRQO14949 82 aa9.59□□□□□ -0.87
NUP98-204ENST00000397004 DEFB130BP0DP73 79 aa9.59□□□□□ -0.87
NUP98-204ENST00000397004 DEFB130AP0DP74 79 aa9.59□□□□□ -0.87
NUP98-204ENST00000397004 TENM1Q9UKZ4 2725 aa9.59□□□□□ -0.87
NUP98-204ENST00000397004 OR13C6PQ8NH95 151 aa9.58□□□□□ -0.88
NUP98-204ENST00000397004 DNAL4O96015 105 aa9.58□□□□□ -0.88
NUP98-204ENST00000397004 C9orf116Q5BN46 136 aaPredicted RBP9.58□□□□□ -0.88
NUP98-204ENST00000397004 TMEM126AQ9H061 195 aa9.58□□□□□ -0.88
NUP98-204ENST00000397004 COX7CP15954 63 aa9.58□□□□□ -0.88
NUP98-204ENST00000397004 H0YGX0 51 aa9.57□□□□□ -0.88
NUP98-204ENST00000397004 KIAA0087Q14695 138 aa9.57□□□□□ -0.88
NUP98-204ENST00000397004 SPATA3Q8NHX4 192 aa9.57□□□□□ -0.88
NUP98-204ENST00000397004 C6orf226Q5I0X4 101 aa9.56□□□□□ -0.88
NUP98-204ENST00000397004 TMEM86BQ8N661 226 aa9.56□□□□□ -0.88
NUP98-204ENST00000397004 hADV29S1A0JD25 119 aa9.55□□□□□ -0.88
NUP98-204ENST00000397004 HELZ2Q9BYK8 2649 aaKnown RBP9.55□□□□□ -0.88
NUP98-204ENST00000397004 WFDC9Q8NEX5 89 aa9.55□□□□□ -0.88
NUP98-204ENST00000397004 UPK3BQ9BT76 320 aa9.55□□□□□ -0.88
NUP98-204ENST00000397004 GYPEP15421 78 aa9.55□□□□□ -0.88
NUP98-204ENST00000397004 HILS1P60008 231 aa9.55□□□□□ -0.88
NUP98-204ENST00000397004 LINC00167Q96N53 147 aa9.55□□□□□ -0.88
NUP98-204ENST00000397004 LINC00612Q8N6U2 182 aa9.54□□□□□ -0.88
NUP98-204ENST00000397004 CRYGAP11844 174 aa9.53□□□□□ -0.88
NUP98-204ENST00000397004 Q6JHZ5 121 aa9.53□□□□□ -0.88
NUP98-204ENST00000397004 KRTAP10-3P60369 221 aa9.53□□□□□ -0.88
NUP98-204ENST00000397004 RPL18AQ02543 176 aaKnown RBP9.53□□□□□ -0.88
NUP98-204ENST00000397004 X6R8D5 127 aa9.52□□□□□ -0.88
NUP98-204ENST00000397004 Q8IZM0 81 aa9.52□□□□□ -0.89
NUP98-204ENST00000397004 Q8N814 137 aa9.52□□□□□ -0.89
NUP98-204ENST00000397004 IGLV10-54A0A075B6I4 117 aa9.52□□□□□ -0.89
NUP98-204ENST00000397004 A0A1B0GX51 115 aa9.51□□□□□ -0.89
NUP98-204ENST00000397004 M0R2N4 97 aa9.51□□□□□ -0.89
NUP98-204ENST00000397004 HIVEP1P15822 2718 aa9.51□□□□□ -0.89
NUP98-204ENST00000397004 A0A1B0GUV1 79 aa9.51□□□□□ -0.89
NUP98-204ENST00000397004 CCKP06307 115 aa9.5□□□□□ -0.89
NUP98-204ENST00000397004 LINC00269Q8N2A0 174 aa9.5□□□□□ -0.89
NUP98-204ENST00000397004 KIR2DL5BQ8NHK3 375 aa9.5□□□□□ -0.89
NUP98-204ENST00000397004 ORMDL1Q9P0S3 153 aa9.5□□□□□ -0.89
NUP98-204ENST00000397004 PKD1L1Q8TDX9 2849 aa9.5□□□□□ -0.89
NUP98-204ENST00000397004 CFAP161Q6P656 301 aa9.5□□□□□ -0.89
NUP98-204ENST00000397004 DEFB4AO15263 64 aa9.5□□□□□ -0.89
NUP98-204ENST00000397004 UNC79Q9P2D8 2635 aa9.5□□□□□ -0.89
NUP98-204ENST00000397004 C10orf25Q5T742 122 aa9.5□□□□□ -0.89
NUP98-204ENST00000397004 OXTP01178 125 aa9.49□□□□□ -0.89
NUP98-204ENST00000397004 OTOGQ6ZRI0 2925 aa9.49□□□□□ -0.89
NUP98-204ENST00000397004 ATOX1O00244 68 aa9.49□□□□□ -0.89
NUP98-204ENST00000397004 FAM19A1Q7Z5A9 133 aa9.49□□□□□ -0.89
NUP98-204ENST00000397004 C6orf223Q8N319 242 aa9.49□□□□□ -0.89
NUP98-204ENST00000397004 USP17L23D6RBM5 183 aa9.48□□□□□ -0.89
NUP98-204ENST00000397004 C16orf95Q9H693 158 aa9.47□□□□□ -0.89
NUP98-204ENST00000397004 HIVEP2P31629 2446 aa9.47□□□□□ -0.89
NUP98-204ENST00000397004 C6orf99Q4VX62 202 aa9.46□□□□□ -0.89
NUP98-204ENST00000397004 LINC00482Q8N8I6 264 aa9.46□□□□□ -0.9
NUP98-204ENST00000397004 CHCHD10Q8WYQ3 142 aaPredicted RBP9.46□□□□□ -0.9
NUP98-204ENST00000397004 RNASE1P07998 156 aaKnown RBP9.45□□□□□ -0.9
NUP98-204ENST00000397004 LYPD5Q6UWN5 251 aa9.45□□□□□ -0.9
NUP98-204ENST00000397004 SERP2Q8N6R1 65 aa9.45□□□□□ -0.9
NUP98-204ENST00000397004 ANK2Q01484 3957 aa9.45□□□□□ -0.9
NUP98-204ENST00000397004 IGHV4-28A0A0C4DH34 117 aa9.44□□□□□ -0.9
NUP98-204ENST00000397004 CMC4P56277 68 aaPredicted RBP9.44□□□□□ -0.9
NUP98-204ENST00000397004 CD164L2Q6UWJ8 174 aa9.43□□□□□ -0.9
NUP98-204ENST00000397004 UNQ6190/PRO20217Q6UXQ8 127 aa9.43□□□□□ -0.9
NUP98-204ENST00000397004 PRO0255Q9UI72 69 aa9.43□□□□□ -0.9
NUP98-204ENST00000397004 NDUFC2O95298 119 aa9.43□□□□□ -0.9
NUP98-204ENST00000397004 ENHOQ6UWT2 76 aa9.43□□□□□ -0.9
NUP98-204ENST00000397004 FAM19A5Q7Z5A7 132 aaPredicted RBP9.43□□□□□ -0.9
NUP98-204ENST00000397004 TRAV23DV6A0A075B6W5 121 aa9.41□□□□□ -0.9
NUP98-204ENST00000397004 REG3AQ06141 175 aa9.41□□□□□ -0.9
NUP98-204ENST00000397004 LINC00575Q6W349 94 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms