RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 TNFRSF6BO95407 300 aa4.77□□□□□ -1.65
SCFD1-202ENST00000396629 PRSS2P07478 247 aa4.77□□□□□ -1.65
SCFD1-202ENST00000396629 CKS1BP61024 79 aa4.77□□□□□ -1.65
SCFD1-202ENST00000396629 SPAG11AQ6PDA7 123 aa4.77□□□□□ -1.65
SCFD1-202ENST00000396629 Q6ZN92 141 aa4.77□□□□□ -1.65
SCFD1-202ENST00000396629 Q8IZM0 81 aa4.77□□□□□ -1.65
SCFD1-202ENST00000396629 KRTAP9-9Q9BYP9 154 aa4.77□□□□□ -1.65
SCFD1-202ENST00000396629 KRTAP9-4Q9BYQ2 154 aa4.77□□□□□ -1.65
SCFD1-202ENST00000396629 IGLV5-37A0A075B6J1 123 aa4.76□□□□□ -1.65
SCFD1-202ENST00000396629 IFI27P40305 119 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-202ENST00000396629 C6orf226Q5I0X4 101 aa4.76□□□□□ -1.65
SCFD1-202ENST00000396629 C3orf22Q8N5N4 141 aa4.76□□□□□ -1.65
SCFD1-202ENST00000396629 TOMM7Q9P0U1 55 aa4.76□□□□□ -1.65
SCFD1-202ENST00000396629 CKS2P33552 79 aa4.75□□□□□ -1.65
SCFD1-202ENST00000396629 PNRC1Q12796 327 aaPredicted RBP4.75□□□□□ -1.65
SCFD1-202ENST00000396629 LINC01551Q86U37 167 aa4.75□□□□□ -1.65
SCFD1-202ENST00000396629 TMEM141Q96I45 108 aa4.75□□□□□ -1.65
SCFD1-202ENST00000396629 V9GYV3 84 aa4.75□□□□□ -1.65
SCFD1-202ENST00000396629 KRTAP19-1Q8IUB9 90 aa4.75□□□□□ -1.65
SCFD1-202ENST00000396629 EIF5A2Q9GZV4 153 aaKnown RBP4.75□□□□□ -1.65
SCFD1-202ENST00000396629 GAGE10A6NGK3 116 aa4.74□□□□□ -1.65
SCFD1-202ENST00000396629 F8VRH5 84 aa4.74□□□□□ -1.65
SCFD1-202ENST00000396629 KRTAP19-2Q3LHN2 52 aa4.74□□□□□ -1.65
SCFD1-202ENST00000396629 TEX43Q6ZNM6 134 aa4.74□□□□□ -1.65
SCFD1-202ENST00000396629 FAM19A3Q7Z5A8 133 aa4.74□□□□□ -1.65
SCFD1-202ENST00000396629 ALKBH7Q9BT30 221 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-202ENST00000396629 NPYP01303 97 aa4.73□□□□□ -1.65
SCFD1-202ENST00000396629 CFC1BP0CG36 223 aa4.73□□□□□ -1.65
SCFD1-202ENST00000396629 MT1HP80294 61 aa4.73□□□□□ -1.65
SCFD1-202ENST00000396629 NAT8BQ9UHF3 227 aa4.73□□□□□ -1.65
SCFD1-202ENST00000396629 FAM74A3Q4VXF1 159 aa4.73□□□□□ -1.65
SCFD1-202ENST00000396629 AMELXQ99217 191 aa4.73□□□□□ -1.65
SCFD1-202ENST00000396629 SMIM7Q9BQ49 75 aa4.73□□□□□ -1.65
SCFD1-202ENST00000396629 D6R8Y8 96 aa4.72□□□□□ -1.65
SCFD1-202ENST00000396629 CEBPGP53567 150 aa4.72□□□□□ -1.65
SCFD1-202ENST00000396629 ZC2HC1BQ5TFG8 222 aa4.72□□□□□ -1.65
SCFD1-202ENST00000396629 PLEKHB2Q96CS7 222 aa4.72□□□□□ -1.65
SCFD1-202ENST00000396629 C2orf88Q9BSF0 95 aa4.72□□□□□ -1.65
SCFD1-202ENST00000396629 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
SCFD1-202ENST00000396629 A0A1B0GW15 77 aa4.72□□□□□ -1.65
SCFD1-202ENST00000396629 RAB5AP20339 215 aa4.72□□□□□ -1.65
SCFD1-202ENST00000396629 CXCL5P42830 114 aa4.72□□□□□ -1.65
SCFD1-202ENST00000396629 PRLHP81277 87 aa4.72□□□□□ -1.65
SCFD1-202ENST00000396629 SMIM27A0A1W2PRY6 76 aa4.71□□□□□ -1.66
SCFD1-202ENST00000396629 KRTAP9-7A8MTY7 169 aa4.71□□□□□ -1.66
SCFD1-202ENST00000396629 RGS21Q2M5E4 152 aa4.71□□□□□ -1.66
SCFD1-202ENST00000396629 C2orf66Q6UXQ4 117 aa4.71□□□□□ -1.66
SCFD1-202ENST00000396629 NKAPP1Q8N9T2 125 aa4.71□□□□□ -1.66
SCFD1-202ENST00000396629 IGKV2-28A0A075B6P5 120 aa4.7□□□□□ -1.66
SCFD1-202ENST00000396629 IGKV2D-28P01615 120 aa4.7□□□□□ -1.66
SCFD1-202ENST00000396629 PPBPP02775 128 aa4.7□□□□□ -1.66
SCFD1-202ENST00000396629 FAM19A1Q7Z5A9 133 aa4.7□□□□□ -1.66
SCFD1-202ENST00000396629 SLC51BQ86UW2 128 aa4.7□□□□□ -1.66
SCFD1-202ENST00000396629 GNB1LQ9BYB4 327 aa4.7□□□□□ -1.66
SCFD1-202ENST00000396629 VCX2Q9H322 139 aa4.7□□□□□ -1.66
SCFD1-202ENST00000396629 PRSS47A8MTI9 375 aa4.7□□□□□ -1.66
SCFD1-202ENST00000396629 SCO1O75880 301 aa4.7□□□□□ -1.66
SCFD1-202ENST00000396629 NPSP0C0P6 89 aa4.7□□□□□ -1.66
SCFD1-202ENST00000396629 KRTAP10-6P60371 365 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-202ENST00000396629 CDKN2A-AS1Q9UH64 79 aa4.7□□□□□ -1.66
SCFD1-202ENST00000396629 A0A1B0GVG6 124 aa4.69□□□□□ -1.66
SCFD1-202ENST00000396629 F8W036 122 aa4.69□□□□□ -1.66
SCFD1-202ENST00000396629 HERVK_113P63121 156 aa4.69□□□□□ -1.66
SCFD1-202ENST00000396629 TMEM126AQ9H061 195 aa4.69□□□□□ -1.66
SCFD1-202ENST00000396629 SEC11AP67812 179 aa4.68□□□□□ -1.66
SCFD1-202ENST00000396629 BLOC1S1P78537 153 aa4.68□□□□□ -1.66
SCFD1-202ENST00000396629 CBLN2Q8IUK8 224 aa4.68□□□□□ -1.66
SCFD1-202ENST00000396629 CYSLTR1Q9Y271 337 aa4.68□□□□□ -1.66
SCFD1-202ENST00000396629 A0A1B0GXF2 115 aa4.68□□□□□ -1.66
SCFD1-202ENST00000396629 TMEM238C9JI98 176 aa4.68□□□□□ -1.66
SCFD1-202ENST00000396629 M0R378 163 aa4.68□□□□□ -1.66
SCFD1-202ENST00000396629 SPINK1P00995 79 aa4.68□□□□□ -1.66
SCFD1-202ENST00000396629 S100A8P05109 93 aa4.68□□□□□ -1.66
SCFD1-202ENST00000396629 SRP19P09132 144 aaKnown RBP4.68□□□□□ -1.66
SCFD1-202ENST00000396629 ORMDL3Q8N138 153 aa4.68□□□□□ -1.66
SCFD1-202ENST00000396629 DAND5Q8N907 189 aa4.68□□□□□ -1.66
SCFD1-202ENST00000396629 SPRR4Q96PI1 79 aa4.68□□□□□ -1.66
SCFD1-202ENST00000396629 IGIPA6NJ69 53 aa4.67□□□□□ -1.66
SCFD1-202ENST00000396629 RPL23P62829 140 aaKnown RBP4.67□□□□□ -1.66
SCFD1-202ENST00000396629 TMEM136Q6ZRR5 245 aa4.67□□□□□ -1.66
SCFD1-202ENST00000396629 Q8NBF4 154 aa4.67□□□□□ -1.66
SCFD1-202ENST00000396629 PRELID3AQ96N28 172 aa4.67□□□□□ -1.66
SCFD1-202ENST00000396629 SMIM1B2RUZ4 78 aa4.67□□□□□ -1.66
SCFD1-202ENST00000396629 MRPL54Q6P161 138 aaKnown RBP4.67□□□□□ -1.66
SCFD1-202ENST00000396629 COX7B2Q8TF08 81 aa4.67□□□□□ -1.66
SCFD1-202ENST00000396629 GEMIN7Q9H840 131 aaKnown RBP4.67□□□□□ -1.66
SCFD1-202ENST00000396629 VPREB1P12018 145 aa4.66□□□□□ -1.66
SCFD1-202ENST00000396629 RAB5BP61020 215 aa4.66□□□□□ -1.66
SCFD1-202ENST00000396629 PDZD11Q5EBL8 140 aa4.66□□□□□ -1.66
SCFD1-202ENST00000396629 BATF3Q9NR55 127 aa4.66□□□□□ -1.66
SCFD1-202ENST00000396629 NDUFA12Q9UI09 145 aa4.66□□□□□ -1.66
SCFD1-202ENST00000396629 Q8N8P6 123 aa4.65□□□□□ -1.66
SCFD1-202ENST00000396629 HIGD2AQ9BW72 106 aa4.65□□□□□ -1.66
SCFD1-202ENST00000396629 LOC389332A0A1B0GUA5 103 aa4.65□□□□□ -1.67
SCFD1-202ENST00000396629 Q8N377 158 aa4.65□□□□□ -1.67
SCFD1-202ENST00000396629 LAMTOR2Q9Y2Q5 125 aa4.65□□□□□ -1.67
SCFD1-202ENST00000396629 RPS29P62273 56 aaKnown RBP4.64□□□□□ -1.67
SCFD1-202ENST00000396629 ADIRFQ15847 76 aa4.64□□□□□ -1.67
SCFD1-202ENST00000396629 ORMDL2Q53FV1 153 aa4.64□□□□□ -1.67
SCFD1-202ENST00000396629 PAPPA-AS1Q5QFB9 102 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms