RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 C2orf48Q96LS8 159 aa10.18□□□□□ -0.78
CLTA-203ENST00000396603 CARD19Q96LW7 228 aa10.18□□□□□ -0.78
CLTA-203ENST00000396603 TINCRA0A1B0GVN0 87 aa10.17□□□□□ -0.78
CLTA-203ENST00000396603 NDUFA6P56556 154 aa10.17□□□□□ -0.78
CLTA-203ENST00000396603 SPAG11BQ08648 103 aa10.17□□□□□ -0.78
CLTA-203ENST00000396603 ZC2HC1BQ5TFG8 222 aa10.17□□□□□ -0.78
CLTA-203ENST00000396603 ORAOV1Q8WV07 137 aa10.17□□□□□ -0.78
CLTA-203ENST00000396603 PACRGQ96M98 296 aaPredicted RBP10.17□□□□□ -0.78
CLTA-203ENST00000396603 SERF1AO75920 110 aa10.16□□□□□ -0.78
CLTA-203ENST00000396603 SYCNQ0VAF6 134 aa10.16□□□□□ -0.78
CLTA-203ENST00000396603 Q6ZRP5 223 aa10.16□□□□□ -0.78
CLTA-203ENST00000396603 LINC00469Q8N7U9 141 aa10.15□□□□□ -0.78
CLTA-203ENST00000396603 CAMK2N2Q96S95 79 aa10.15□□□□□ -0.78
CLTA-203ENST00000396603 IGLV4-69A0A075B6H9 119 aa10.14□□□□□ -0.79
CLTA-203ENST00000396603 H3BRM9 83 aa10.14□□□□□ -0.79
CLTA-203ENST00000396603 PRSS2P07478 247 aa10.14□□□□□ -0.79
CLTA-203ENST00000396603 KRTAP10-8P60410 259 aa10.14□□□□□ -0.79
CLTA-203ENST00000396603 IFI27L1Q96BM0 104 aa10.14□□□□□ -0.79
CLTA-203ENST00000396603 HSPB8Q9UJY1 196 aa10.14□□□□□ -0.79
CLTA-203ENST00000396603 HIST1H2BKO60814 126 aa10.13□□□□□ -0.79
CLTA-203ENST00000396603 LEPROTL1O95214 131 aa10.13□□□□□ -0.79
CLTA-203ENST00000396603 HIST1H2BJP06899 126 aa10.13□□□□□ -0.79
CLTA-203ENST00000396603 HIST1H2BOP23527 126 aa10.13□□□□□ -0.79
CLTA-203ENST00000396603 HIST1H2BBP33778 126 aa10.13□□□□□ -0.79
CLTA-203ENST00000396603 HIST1H2BDP58876 126 aa10.13□□□□□ -0.79
CLTA-203ENST00000396603 HIST1H2BCP62807 126 aa10.13□□□□□ -0.79
CLTA-203ENST00000396603 SRSF9Q13242 221 aaKnown RBP eCLIP10.13□□□□□ -0.79
CLTA-203ENST00000396603 HIST2H2BEQ16778 126 aa10.13□□□□□ -0.79
CLTA-203ENST00000396603 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.13□□□□□ -0.79
CLTA-203ENST00000396603 HIST1H2BHQ93079 126 aa10.13□□□□□ -0.79
CLTA-203ENST00000396603 HIST1H2BNQ99877 126 aa10.13□□□□□ -0.79
CLTA-203ENST00000396603 HIST1H2BMQ99879 126 aa10.13□□□□□ -0.79
CLTA-203ENST00000396603 NDUFA1O15239 70 aa10.12□□□□□ -0.79
CLTA-203ENST00000396603 PTTG1IPP53801 180 aa10.12□□□□□ -0.79
CLTA-203ENST00000396603 FAM19A2Q8N3H0 131 aa10.12□□□□□ -0.79
CLTA-203ENST00000396603 CDKN2A-AS1Q9UH64 79 aa10.12□□□□□ -0.79
CLTA-203ENST00000396603 IGLV5-45A0A087WSX0 123 aa10.11□□□□□ -0.79
CLTA-203ENST00000396603 TRAV12-1A0A0B4J245 112 aa10.11□□□□□ -0.79
CLTA-203ENST00000396603 LOC107984640A0A0U1RRK4 108 aa10.11□□□□□ -0.79
CLTA-203ENST00000396603 IGLC3P0DOY3 106 aa10.11□□□□□ -0.79
CLTA-203ENST00000396603 LINC00526Q96FQ7 95 aa10.11□□□□□ -0.79
CLTA-203ENST00000396603 RNF213Q63HN8 5207 aa10.1□□□□□ -0.79
CLTA-203ENST00000396603 RNF151Q2KHN1 245 aa10.1□□□□□ -0.79
CLTA-203ENST00000396603 CXCL5P42830 114 aa10.09□□□□□ -0.79
CLTA-203ENST00000396603 CKS1BP61024 79 aa10.09□□□□□ -0.79
CLTA-203ENST00000396603 C6orf226Q5I0X4 101 aa10.09□□□□□ -0.79
CLTA-203ENST00000396603 Q8IZM0 81 aa10.09□□□□□ -0.79
CLTA-203ENST00000396603 MRPL35Q9NZE8 188 aaKnown RBP10.09□□□□□ -0.79
CLTA-203ENST00000396603 TOMM7Q9P0U1 55 aa10.09□□□□□ -0.79
CLTA-203ENST00000396603 CHTOPQ9Y3Y2 248 aaKnown RBP10.09□□□□□ -0.79
CLTA-203ENST00000396603 LINC00310P59036 64 aa10.08□□□□□ -0.8
CLTA-203ENST00000396603 TRBV30A0A0K0K1B3 111 aa10.06□□□□□ -0.8
CLTA-203ENST00000396603 SMIM1B2RUZ4 78 aa10.06□□□□□ -0.8
CLTA-203ENST00000396603 F8VRH5 84 aa10.06□□□□□ -0.8
CLTA-203ENST00000396603 KIAA0087Q14695 138 aa10.06□□□□□ -0.8
CLTA-203ENST00000396603 FABP4P15090 132 aa10.05□□□□□ -0.8
CLTA-203ENST00000396603 TMEM170BQ5T4T1 132 aa10.05□□□□□ -0.8
CLTA-203ENST00000396603 MAP1LC3CQ9BXW4 147 aa10.05□□□□□ -0.8
CLTA-203ENST00000396603 NUPR1O60356 82 aa10.04□□□□□ -0.8
CLTA-203ENST00000396603 SPINK8P0C7L1 97 aa10.04□□□□□ -0.8
CLTA-203ENST00000396603 ZNF22P17026 224 aaPredicted RBP10.04□□□□□ -0.8
CLTA-203ENST00000396603 GAGE2BQ13066 116 aa10.04□□□□□ -0.8
CLTA-203ENST00000396603 COA6Q5JTJ3 125 aaKnown RBP10.04□□□□□ -0.8
CLTA-203ENST00000396603 COX7B2Q8TF08 81 aa10.04□□□□□ -0.8
CLTA-203ENST00000396603 C11orf86A6NJI1 115 aa10.03□□□□□ -0.8
CLTA-203ENST00000396603 H0Y8G0 127 aa10.03□□□□□ -0.8
CLTA-203ENST00000396603 PLNP26678 52 aa10.03□□□□□ -0.8
CLTA-203ENST00000396603 SFTA2Q6UW10 78 aa10.03□□□□□ -0.8
CLTA-203ENST00000396603 UNQ6190/PRO20217Q6UXQ8 127 aa10.03□□□□□ -0.8
CLTA-203ENST00000396603 RPL18AQ02543 176 aaKnown RBP10.02□□□□□ -0.81
CLTA-203ENST00000396603 A0A1W2PNN7 141 aa10.01□□□□□ -0.81
CLTA-203ENST00000396603 TLX1NBP0CAT3 122 aa10.01□□□□□ -0.81
CLTA-203ENST00000396603 ODF1Q14990 250 aa10.01□□□□□ -0.81
CLTA-203ENST00000396603 C9orf116Q5BN46 136 aaPredicted RBP10.01□□□□□ -0.81
CLTA-203ENST00000396603 C2orf82Q6UX34 121 aa10.01□□□□□ -0.81
CLTA-203ENST00000396603 C6orf48Q9UBA6 75 aa10.01□□□□□ -0.81
CLTA-203ENST00000396603 IGLV5-39A0A0G2JS06 123 aa10□□□□□ -0.81
CLTA-203ENST00000396603 C10orf25Q5T742 122 aa10□□□□□ -0.81
CLTA-203ENST00000396603 PSORS1C2Q9UIG4 136 aa10□□□□□ -0.81
CLTA-203ENST00000396603 DPM2O94777 84 aa9.99□□□□□ -0.81
CLTA-203ENST00000396603 NDUFC2-KCTD14E9PQ53 114 aa9.98□□□□□ -0.81
CLTA-203ENST00000396603 S100A6P06703 90 aa9.97□□□□□ -0.81
CLTA-203ENST00000396603 HERVK_113P61574 105 aa9.97□□□□□ -0.81
CLTA-203ENST00000396603 TMEM223A0PJW6 202 aa9.96□□□□□ -0.82
CLTA-203ENST00000396603 SYS1-DBNDD2H3BUS1 97 aa9.96□□□□□ -0.82
CLTA-203ENST00000396603 C1orf137Q5JT78 98 aa9.96□□□□□ -0.82
CLTA-203ENST00000396603 DIRC1Q969H9 104 aa9.96□□□□□ -0.82
CLTA-203ENST00000396603 IGKCP01834 107 aa9.95□□□□□ -0.82
CLTA-203ENST00000396603 PET117Q6UWS5 81 aa9.95□□□□□ -0.82
CLTA-203ENST00000396603 AKR1D1P51857 326 aa9.94□□□□□ -0.82
CLTA-203ENST00000396603 GAGE2EQ4V326 116 aa9.94□□□□□ -0.82
CLTA-203ENST00000396603 GAGE2DQ9UEU5 116 aa9.94□□□□□ -0.82
CLTA-203ENST00000396603 C20orf202A1L168 122 aa9.93□□□□□ -0.82
CLTA-203ENST00000396603 IGLV7-43P04211 117 aa9.93□□□□□ -0.82
CLTA-203ENST00000396603 S100A2P29034 98 aa9.93□□□□□ -0.82
CLTA-203ENST00000396603 PHF5AQ7RTV0 110 aaKnown RBP9.93□□□□□ -0.82
CLTA-203ENST00000396603 PLEKHB2Q96CS7 222 aa9.92□□□□□ -0.82
CLTA-203ENST00000396603 KRTDAPP60985 99 aa9.91□□□□□ -0.82
CLTA-203ENST00000396603 COX17Q14061 63 aa9.91□□□□□ -0.82
CLTA-203ENST00000396603 IGLV1-50A0A075B6I6 118 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms