RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 NXT2Q9NPJ8 142 aaKnown RBP10.44□□□□□ -0.74
EXOSC3-202ENST00000396521 PYGO1Q9Y3Y4 419 aa10.44□□□□□ -0.74
EXOSC3-202ENST00000396521 IFI27P40305 119 aaPredicted RBP10.43□□□□□ -0.74
EXOSC3-202ENST00000396521 LBHQ53QV2 105 aaPredicted RBP10.43□□□□□ -0.74
EXOSC3-202ENST00000396521 ALKBH7Q9BT30 221 aaPredicted RBP10.43□□□□□ -0.74
EXOSC3-202ENST00000396521 KRTAP9-2Q9BYQ4 174 aa10.43□□□□□ -0.74
EXOSC3-202ENST00000396521 SCO1O75880 301 aa10.42□□□□□ -0.74
EXOSC3-202ENST00000396521 S100A1P23297 94 aa10.42□□□□□ -0.74
EXOSC3-202ENST00000396521 PRSS47A8MTI9 375 aa10.41□□□□□ -0.74
EXOSC3-202ENST00000396521 ORMDL2Q53FV1 153 aa10.41□□□□□ -0.74
EXOSC3-202ENST00000396521 K7EMI3 77 aa10.4□□□□□ -0.74
EXOSC3-202ENST00000396521 C9orf129Q5T035 196 aaKnown RBP10.4□□□□□ -0.74
EXOSC3-202ENST00000396521 LINC00242Q5T6M2 205 aa10.4□□□□□ -0.74
EXOSC3-202ENST00000396521 FA2HQ7L5A8 372 aa10.4□□□□□ -0.74
EXOSC3-202ENST00000396521 TMEM141Q96I45 108 aa10.38□□□□□ -0.75
EXOSC3-202ENST00000396521 PRSS2P07478 247 aa10.37□□□□□ -0.75
EXOSC3-202ENST00000396521 RPL28P46779 137 aaKnown RBP10.37□□□□□ -0.75
EXOSC3-202ENST00000396521 CKS1BP61024 79 aa10.37□□□□□ -0.75
EXOSC3-202ENST00000396521 C2orf82Q6UX34 121 aa10.37□□□□□ -0.75
EXOSC3-202ENST00000396521 C2orf88Q9BSF0 95 aa10.37□□□□□ -0.75
EXOSC3-202ENST00000396521 CYSLTR1Q9Y271 337 aa10.37□□□□□ -0.75
EXOSC3-202ENST00000396521 COLCA2A8K830 154 aa10.36□□□□□ -0.75
EXOSC3-202ENST00000396521 CRYGAP11844 174 aa10.36□□□□□ -0.75
EXOSC3-202ENST00000396521 G0S2P27469 103 aa10.36□□□□□ -0.75
EXOSC3-202ENST00000396521 Q6ZN92 141 aa10.36□□□□□ -0.75
EXOSC3-202ENST00000396521 TEX43Q6ZNM6 134 aa10.36□□□□□ -0.75
EXOSC3-202ENST00000396521 C18orf32Q8TCD1 76 aa10.36□□□□□ -0.75
EXOSC3-202ENST00000396521 TP73-AS1Q9UF72 201 aa10.36□□□□□ -0.75
EXOSC3-202ENST00000396521 C22orf24Q9Y442 160 aa10.36□□□□□ -0.75
EXOSC3-202ENST00000396521 IGLV4-3A0A075B6K6 122 aa10.35□□□□□ -0.75
EXOSC3-202ENST00000396521 TSPAN13O95857 204 aa10.35□□□□□ -0.75
EXOSC3-202ENST00000396521 TRGC2P03986 189 aa10.35□□□□□ -0.75
EXOSC3-202ENST00000396521 C6orf226Q5I0X4 101 aa10.35□□□□□ -0.75
EXOSC3-202ENST00000396521 C2orf66Q6UXQ4 117 aa10.35□□□□□ -0.75
EXOSC3-202ENST00000396521 NPSP0C0P6 89 aa10.34□□□□□ -0.75
EXOSC3-202ENST00000396521 RAB5BP61020 215 aa10.34□□□□□ -0.75
EXOSC3-202ENST00000396521 LCE2AQ5TA79 106 aaPredicted RBP10.33□□□□□ -0.76
EXOSC3-202ENST00000396521 Q8IZM0 81 aa10.33□□□□□ -0.76
EXOSC3-202ENST00000396521 TYMSOSQ8TAI1 123 aa10.33□□□□□ -0.76
EXOSC3-202ENST00000396521 BCE1O60756 84 aa10.32□□□□□ -0.76
EXOSC3-202ENST00000396521 SEC11AP67812 179 aa10.31□□□□□ -0.76
EXOSC3-202ENST00000396521 CTAG1AP78358 180 aa10.31□□□□□ -0.76
EXOSC3-202ENST00000396521 MRPL55Q7Z7F7 128 aaKnown RBP10.31□□□□□ -0.76
EXOSC3-202ENST00000396521 BAGE3Q86Y29 109 aa10.31□□□□□ -0.76
EXOSC3-202ENST00000396521 VCX2Q9H322 139 aa10.31□□□□□ -0.76
EXOSC3-202ENST00000396521 LINC01546A6NGU7 62 aa10.3□□□□□ -0.76
EXOSC3-202ENST00000396521 LINC01549A6NIU2 74 aa10.3□□□□□ -0.76
EXOSC3-202ENST00000396521 TOMM7Q9P0U1 55 aa10.3□□□□□ -0.76
EXOSC3-202ENST00000396521 A0A087X002 238 aa10.29□□□□□ -0.76
EXOSC3-202ENST00000396521 LINC00614P0C842 121 aa10.29□□□□□ -0.76
EXOSC3-202ENST00000396521 FAM19A3Q7Z5A8 133 aa10.29□□□□□ -0.76
EXOSC3-202ENST00000396521 TOMM6Q96B49 74 aa10.29□□□□□ -0.76
EXOSC3-202ENST00000396521 AMELXQ99217 191 aa10.29□□□□□ -0.76
EXOSC3-202ENST00000396521 XAGE1AQ9HD64 81 aa10.29□□□□□ -0.76
EXOSC3-202ENST00000396521 F8VRH5 84 aa10.28□□□□□ -0.76
EXOSC3-202ENST00000396521 HBDP02042 147 aa10.28□□□□□ -0.76
EXOSC3-202ENST00000396521 CXCL5P42830 114 aa10.28□□□□□ -0.76
EXOSC3-202ENST00000396521 PAPPA-AS1Q5QFB9 102 aa10.28□□□□□ -0.76
EXOSC3-202ENST00000396521 LINC00469Q8N7U9 141 aa10.28□□□□□ -0.76
EXOSC3-202ENST00000396521 CHCHD1Q96BP2 118 aaKnown RBP10.28□□□□□ -0.76
EXOSC3-202ENST00000396521 SCGB3A1Q96QR1 104 aa10.28□□□□□ -0.76
EXOSC3-202ENST00000396521 HERVK_113P63121 156 aa10.27□□□□□ -0.77
EXOSC3-202ENST00000396521 TIMM17AQ99595 171 aa10.27□□□□□ -0.77
EXOSC3-202ENST00000396521 HSBP1O75506 76 aa10.26□□□□□ -0.77
EXOSC3-202ENST00000396521 PMCHL1Q16048 86 aa10.26□□□□□ -0.77
EXOSC3-202ENST00000396521 FAM229BQ4G0N7 80 aa10.26□□□□□ -0.77
EXOSC3-202ENST00000396521 URB1-AS1Q96HZ7 61 aa10.26□□□□□ -0.77
EXOSC3-202ENST00000396521 IGIPA6NJ69 53 aa10.25□□□□□ -0.77
EXOSC3-202ENST00000396521 LINC00173Q6ZV60 143 aa10.25□□□□□ -0.77
EXOSC3-202ENST00000396521 ERASQ7Z444 233 aa10.25□□□□□ -0.77
EXOSC3-202ENST00000396521 TPRXLQ17RH7 258 aa10.24□□□□□ -0.77
EXOSC3-202ENST00000396521 CDIP1Q9H305 208 aa10.23□□□□□ -0.77
EXOSC3-202ENST00000396521 GEMIN7Q9H840 131 aaKnown RBP10.23□□□□□ -0.77
EXOSC3-202ENST00000396521 A0A096LNJ9 63 aa10.22□□□□□ -0.77
EXOSC3-202ENST00000396521 KRTAP9-6A0A140TA67 174 aa10.22□□□□□ -0.77
EXOSC3-202ENST00000396521 SERF1AO75920 110 aa10.22□□□□□ -0.77
EXOSC3-202ENST00000396521 LINC00304Q8N9R0 145 aa10.22□□□□□ -0.77
EXOSC3-202ENST00000396521 LINC00167Q96N53 147 aa10.22□□□□□ -0.77
EXOSC3-202ENST00000396521 CDKN2A-AS1Q9UH64 79 aa10.21□□□□□ -0.77
EXOSC3-202ENST00000396521 FAT4Q6V0I7 4981 aa10.21□□□□□ -0.78
EXOSC3-202ENST00000396521 HIST1H2BKO60814 126 aa10.2□□□□□ -0.78
EXOSC3-202ENST00000396521 ATP5LO75964 103 aa10.2□□□□□ -0.78
EXOSC3-202ENST00000396521 HIST1H2BJP06899 126 aa10.2□□□□□ -0.78
EXOSC3-202ENST00000396521 HIST1H2BOP23527 126 aa10.2□□□□□ -0.78
EXOSC3-202ENST00000396521 HIST1H2BBP33778 126 aa10.2□□□□□ -0.78
EXOSC3-202ENST00000396521 UBE2AP49459 152 aa10.2□□□□□ -0.78
EXOSC3-202ENST00000396521 HIST1H2BDP58876 126 aa10.2□□□□□ -0.78
EXOSC3-202ENST00000396521 HIST1H2BCP62807 126 aa10.2□□□□□ -0.78
EXOSC3-202ENST00000396521 HIST2H2BEQ16778 126 aa10.2□□□□□ -0.78
EXOSC3-202ENST00000396521 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.2□□□□□ -0.78
EXOSC3-202ENST00000396521 ZC2HC1BQ5TFG8 222 aa10.2□□□□□ -0.78
EXOSC3-202ENST00000396521 HIST1H2BHQ93079 126 aa10.2□□□□□ -0.78
EXOSC3-202ENST00000396521 HIST1H2BNQ99877 126 aa10.2□□□□□ -0.78
EXOSC3-202ENST00000396521 HIST1H2BMQ99879 126 aa10.2□□□□□ -0.78
EXOSC3-202ENST00000396521 IGLV5-37A0A075B6J1 123 aa10.19□□□□□ -0.78
EXOSC3-202ENST00000396521 IGKV2D-26A0A0A0MRZ7 120 aa10.19□□□□□ -0.78
EXOSC3-202ENST00000396521 RPL37AP8A6NKH3 93 aa10.19□□□□□ -0.78
EXOSC3-202ENST00000396521 NDUFA6P56556 154 aa10.19□□□□□ -0.78
EXOSC3-202ENST00000396521 PDZD11Q5EBL8 140 aa10.18□□□□□ -0.78
EXOSC3-202ENST00000396521 KRTAP13-1Q8IUC0 172 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms