RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 A0A087WZ39 114 aa8.37□□□□□ -1.07
ITGB1-202ENST00000396033 TEX49A0A1B0GTD5 131 aa8.37□□□□□ -1.07
ITGB1-202ENST00000396033 H7C2G1 150 aa8.36□□□□□ -1.07
ITGB1-202ENST00000396033 IFITM1P13164 125 aa8.36□□□□□ -1.07
ITGB1-202ENST00000396033 Q8N3U1 123 aa8.36□□□□□ -1.07
ITGB1-202ENST00000396033 SMIM20Q8N5G0 67 aa8.36□□□□□ -1.07
ITGB1-202ENST00000396033 LYRM7Q5U5X0 104 aa8.36□□□□□ -1.07
ITGB1-202ENST00000396033 LINC00269Q8N2A0 174 aa8.36□□□□□ -1.07
ITGB1-202ENST00000396033 IGHV3-33P01772 117 aa8.36□□□□□ -1.07
ITGB1-202ENST00000396033 ANGP03950 147 aaKnown RBP8.36□□□□□ -1.07
ITGB1-202ENST00000396033 LELP1Q5T871 98 aa8.35□□□□□ -1.07
ITGB1-202ENST00000396033 C11orf68Q9H3H3 251 aaKnown RBP8.35□□□□□ -1.07
ITGB1-202ENST00000396033 Q1RN00 199 aa8.35□□□□□ -1.07
ITGB1-202ENST00000396033 Q6ZTC4 211 aa8.34□□□□□ -1.07
ITGB1-202ENST00000396033 LINC00308Q8TCZ7 52 aa8.34□□□□□ -1.07
ITGB1-202ENST00000396033 SLC25A20O43772 301 aa8.33□□□□□ -1.08
ITGB1-202ENST00000396033 SCGB1C2P0DMR2 95 aa8.33□□□□□ -1.08
ITGB1-202ENST00000396033 A0A0J9YWU9 116 aa8.33□□□□□ -1.08
ITGB1-202ENST00000396033 REG3AQ06141 175 aa8.33□□□□□ -1.08
ITGB1-202ENST00000396033 COPS9Q8WXC6 57 aa8.33□□□□□ -1.08
ITGB1-202ENST00000396033 C9JAW5 83 aa8.33□□□□□ -1.08
ITGB1-202ENST00000396033 PRB2P02812 416 aaPredicted RBP8.32□□□□□ -1.08
ITGB1-202ENST00000396033 IGLV10-54A0A075B6I4 117 aa8.32□□□□□ -1.08
ITGB1-202ENST00000396033 NOTCH1P46531 2555 aa8.32□□□□□ -1.08
ITGB1-202ENST00000396033 KPRPQ5T749 579 aaPredicted RBP8.31□□□□□ -1.08
ITGB1-202ENST00000396033 NTN5Q8WTR8 489 aaPredicted RBP8.31□□□□□ -1.08
ITGB1-202ENST00000396033 CHCHD10Q8WYQ3 142 aaPredicted RBP8.31□□□□□ -1.08
ITGB1-202ENST00000396033 LYPD5Q6UWN5 251 aa8.31□□□□□ -1.08
ITGB1-202ENST00000396033 SOSTDC1Q6X4U4 206 aa8.31□□□□□ -1.08
ITGB1-202ENST00000396033 CD164L2Q6UWJ8 174 aa8.31□□□□□ -1.08
ITGB1-202ENST00000396033 C6orf226Q5I0X4 101 aa8.3□□□□□ -1.08
ITGB1-202ENST00000396033 H3BNG1 76 aa8.3□□□□□ -1.08
ITGB1-202ENST00000396033 NANOS2P60321 138 aaKnown RBP8.3□□□□□ -1.08
ITGB1-202ENST00000396033 PPDPFQ9H3Y8 114 aa8.3□□□□□ -1.08
ITGB1-202ENST00000396033 TENM3Q9P273 2699 aa8.3□□□□□ -1.08
ITGB1-202ENST00000396033 COX7A2LO14548 114 aa8.29□□□□□ -1.08
ITGB1-202ENST00000396033 RPL13AP40429 203 aaKnown RBP8.29□□□□□ -1.08
ITGB1-202ENST00000396033 LINC01561Q8N1V8 128 aa8.29□□□□□ -1.08
ITGB1-202ENST00000396033 C11orf45Q8TAV5 145 aa8.29□□□□□ -1.08
ITGB1-202ENST00000396033 LINC00158P58513 81 aa8.28□□□□□ -1.08
ITGB1-202ENST00000396033 MIR7-3HGQ8N6C7 128 aa8.28□□□□□ -1.08
ITGB1-202ENST00000396033 LINC01600Q96MT4 127 aa8.28□□□□□ -1.08
ITGB1-202ENST00000396033 TTC32Q5I0X7 151 aa8.28□□□□□ -1.08
ITGB1-202ENST00000396033 Q8IZM0 81 aa8.28□□□□□ -1.08
ITGB1-202ENST00000396033 KLK12Q9UKR0 248 aa8.28□□□□□ -1.08
ITGB1-202ENST00000396033 TRIAP1O43715 76 aa8.28□□□□□ -1.08
ITGB1-202ENST00000396033 MALP21145 153 aa8.28□□□□□ -1.08
ITGB1-202ENST00000396033 M0QXV9 152 aa8.27□□□□□ -1.08
ITGB1-202ENST00000396033 IBA57-AS1B1ANH7 110 aa8.27□□□□□ -1.09
ITGB1-202ENST00000396033 DEFB131BA0A096LNP1 70 aa8.27□□□□□ -1.09
ITGB1-202ENST00000396033 TRBV30A0A0K0K1B3 111 aa8.27□□□□□ -1.09
ITGB1-202ENST00000396033 GAGE2BQ13066 116 aa8.27□□□□□ -1.09
ITGB1-202ENST00000396033 GAGE2EQ4V326 116 aa8.27□□□□□ -1.09
ITGB1-202ENST00000396033 GAGE2DQ9UEU5 116 aa8.27□□□□□ -1.09
ITGB1-202ENST00000396033 PFN2P35080 140 aa8.26□□□□□ -1.09
ITGB1-202ENST00000396033 K7EIL1 84 aa8.26□□□□□ -1.09
ITGB1-202ENST00000396033 DEFB121Q5J5C9 76 aa8.26□□□□□ -1.09
ITGB1-202ENST00000396033 C15orf53Q8NAA6 179 aa8.26□□□□□ -1.09
ITGB1-202ENST00000396033 MRAPQ8TCY5 172 aa8.26□□□□□ -1.09
ITGB1-202ENST00000396033 NBEAL1Q6ZS30 2694 aa8.26□□□□□ -1.09
ITGB1-202ENST00000396033 C2orf82Q6UX34 121 aa8.25□□□□□ -1.09
ITGB1-202ENST00000396033 WFDC10BQ8IUB3 73 aa8.25□□□□□ -1.09
ITGB1-202ENST00000396033 PRR34Q9NV39 138 aa8.25□□□□□ -1.09
ITGB1-202ENST00000396033 SMCR5Q8TEV8 140 aa8.25□□□□□ -1.09
ITGB1-202ENST00000396033 CRPP02741 224 aa8.25□□□□□ -1.09
ITGB1-202ENST00000396033 Q6Q795 121 aa8.25□□□□□ -1.09
ITGB1-202ENST00000396033 LINC01620Q4KN68 170 aa8.24□□□□□ -1.09
ITGB1-202ENST00000396033 COX6CP09669 75 aa8.24□□□□□ -1.09
ITGB1-202ENST00000396033 ATXN8Q156A1 80 aa8.24□□□□□ -1.09
ITGB1-202ENST00000396033 ENHOQ6UWT2 76 aa8.24□□□□□ -1.09
ITGB1-202ENST00000396033 UBE2WQ96B02 151 aa8.24□□□□□ -1.09
ITGB1-202ENST00000396033 TM2D3Q9BRN9 247 aa8.23□□□□□ -1.09
ITGB1-202ENST00000396033 CYSTM1Q9H1C7 97 aa8.23□□□□□ -1.09
ITGB1-202ENST00000396033 SND1-IT1Q9HBX3 110 aa8.23□□□□□ -1.09
ITGB1-202ENST00000396033 SNCGO76070 127 aa8.23□□□□□ -1.09
ITGB1-202ENST00000396033 CXCL5P42830 114 aa8.23□□□□□ -1.09
ITGB1-202ENST00000396033 KIAA0087Q14695 138 aa8.23□□□□□ -1.09
ITGB1-202ENST00000396033 ESRGQ1W209 222 aa8.23□□□□□ -1.09
ITGB1-202ENST00000396033 CCL18P55774 89 aa8.22□□□□□ -1.09
ITGB1-202ENST00000396033 CLEC2BQ92478 149 aa8.22□□□□□ -1.09
ITGB1-202ENST00000396033 C22orf24Q9Y442 160 aa8.22□□□□□ -1.09
ITGB1-202ENST00000396033 LOC107984640A0A0U1RRK4 108 aa8.21□□□□□ -1.1
ITGB1-202ENST00000396033 MGAM2Q2M2H8 2515 aa8.21□□□□□ -1.1
ITGB1-202ENST00000396033 SPAG11BQ08648 103 aa8.21□□□□□ -1.1
ITGB1-202ENST00000396033 TRAV13-2A0A0B4J235 113 aa8.2□□□□□ -1.1
ITGB1-202ENST00000396033 TRAV8-4A0A0B4J246 113 aa8.2□□□□□ -1.1
ITGB1-202ENST00000396033 HUWE1Q7Z6Z7 4374 aaKnown RBP8.2□□□□□ -1.1
ITGB1-202ENST00000396033 TRAV10A0A0B4J240 114 aa8.2□□□□□ -1.1
ITGB1-202ENST00000396033 TRBV10-2A0A0K0K1G8 114 aa8.2□□□□□ -1.1
ITGB1-202ENST00000396033 MDFIQ99750 246 aa8.2□□□□□ -1.1
ITGB1-202ENST00000396033 KLK5Q9Y337 293 aaPredicted RBP8.2□□□□□ -1.1
ITGB1-202ENST00000396033 IGKV2-28A0A075B6P5 120 aa8.19□□□□□ -1.1
ITGB1-202ENST00000396033 IGKV2D-28P01615 120 aa8.19□□□□□ -1.1
ITGB1-202ENST00000396033 LINC00337Q8N6G1 96 aa8.19□□□□□ -1.1
ITGB1-202ENST00000396033 C6orf223Q8N319 242 aa8.18□□□□□ -1.1
ITGB1-202ENST00000396033 LINC00526Q96FQ7 95 aa8.18□□□□□ -1.1
ITGB1-202ENST00000396033 COX17Q14061 63 aa8.17□□□□□ -1.1
ITGB1-202ENST00000396033 C9orf116Q5BN46 136 aaPredicted RBP8.17□□□□□ -1.1
ITGB1-202ENST00000396033 LST1O00453 97 aa8.17□□□□□ -1.1
ITGB1-202ENST00000396033 TRBV7-7A0A0K0K1E9 115 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms